Pimephales promelas (fathead minnow): 120491321
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Entry
120491321 CDS
T08155
Symbol
sox21a
Name
(RefSeq) transcription factor Sox-21-A
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprm03000
]
120491321 (sox21a)
Transcription factors [BR:
pprm03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
120491321 (sox21a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
120491321
NCBI-ProteinID:
XP_039545000
LinkDB
All DBs
Position
Unknown
AA seq
239 aa
AA seq
DB search
MAKPMDHVKRPMNAFMVWSRAQRRKMALDNPKMHNSEISKRLGGEWKLLSDSEKRPFIDE
AKRLRAVHMKEHPDYKYRPRRKPKTLVKKDRYHFNVTYNLGDSDPLKSARLPSDALADSL
SADKTSVAAATRVFFSHHHLSANPYQFLDLNPKIAELPPAPFPHYSLLGYPGGVSAFPGM
GVLAGAPHAHPSPGNPGHMVPYNCLGWPGSGPAVPSSYVLLPGMTKAQHEHYLTYAATI
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagcctatggaccatgtcaagcgtcctatgaacgcttttatggtgtggtcgagg
gctcagagacgcaagatggcactggacaacccgaagatgcacaactctgagatcagcaaa
cgcctcggaggcgaatggaagctcttgtcagactctgaaaaaagaccttttatcgacgag
gccaaacgcctgagagccgttcacatgaaagaacacccggattacaaatacagaccgcgg
cgaaagcccaaaaccttggtcaaaaaagataggtatcattttaatgtgacgtataatctg
ggtgacagtgacccgttgaaaagtgcgcggttacccagtgacgcgctcgcggactcgctg
agcgcggacaaaacatctgtcgcggccgctactcgggtgtttttcagtcaccaccacctg
tccgccaacccctatcagtttcttgacctgaatcccaaaattgcggaattaccccctgct
cctttcccacattactctttgctcgggtatcccggtggagtctccgcgttccccggcatg
ggcgttctggccggtgcgccacacgctcacccgtctccggggaacccgggccacatggtg
ccctataactgcctgggctggccgggttctggacctgctgttccttcttcttacgtgctt
ttaccaggaatgaccaaagctcagcacgaacattacctgacatacgccgccacgatatga
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integrated database retrieval system
