Pimephales promelas (fathead minnow): 120491414
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Entry
120491414 CDS
T08155
Symbol
si:ch211-85n16.4
Name
(RefSeq) ras and Rab interactor 2 isoform X1
KO
K23687
Ras and Rab interactor 2/3
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pprm04131
]
120491414 (si:ch211-85n16.4)
Membrane trafficking [BR:
pprm04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
120491414 (si:ch211-85n16.4)
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Ortholog
Paralog
GFIT
Motif
Pfam:
RIN1
VPS9
RA
Lpg0393_VPS9
RA_2
FERM_f0
RA_3
Motif
Other DBs
NCBI-GeneID:
120491414
NCBI-ProteinID:
XP_039545162
LinkDB
All DBs
Position
Unknown
AA seq
893 aa
AA seq
DB search
MDSSLQLSRIDRSGSFLQLVDAFALSLSTLEQQMVQEKDRDPVRDPDTSMFIEIEGEMSA
VCLQYPAFDGDHGTSSSVSVLDKLIHTHPIWLLLSIDQQEATGILQQQQAGVFLVWRSSV
LQKKVLSFHTDGTSDSSVIHIPVKESHYSISAFSLEGSGISFADLFHLVAFYCISRDILP
STLKLPEEIHSAETLSELHEVAQQGAAFWESSASKQAPKSSLVLERRTISLHRNFSLIED
QTCTRTGNLNVPLPLTDTCPNAPEGKRSCSNSALSFINPVFVKTQQDLTGNVATKDTTAE
NRKSPPPRPPPPRILVHTPALPPGCRTMLSGAGITRTKPKSIAKRPSSNQPPPRPPQPPD
IDSYRCTIALDDETISMALSQARRTHTPLNSTNSTVLQQWTGPEEKGRSSSGLSTSSSDS
LDCPPHPLHLDPPKSVGQGLSTDDSSDEYDGEEEDYGVGLERDLHLRLRSARKTKRLLAV
ELAGASPRSLIISRALRGQFRNVLNVLATPEKRILLQIIELSQDKGSYFGCLVQDYLSFV
KENKNCHSSSQDLLQTLRQFMTQMKAYLIQSSEINPPIESYIPEDQIDPVLEKAMHKCVL
KTLYGCLQSALHEFQVAGGVCQRLQENLTLAKTKHPHELGVIGARPPDAHAIHRIRRKLR
SMCSMYSPERKISVLLKVCKLIYTIMQDHGVRMFGADDFLPMLTYVLIQCDMPQLDTEIL
YMMELIDPPLLHGEGGYYLTSAYGAMSLIKNFQEEQAARILSSTARDTLHQWHQRRTLQR
NLPSVDDFQNYMRVALQKAGSGCTAKTLQVRPYATTEEVCRLCALKFSVSDPENYGLFLL
TDDSSQQLAADTQPQWIKAELHSRPIPQHFYFVYRKIANTNCPTPVSAEQDDP
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atggactcatctttacaactcagtcggatagacagaagtggcagctttcttcagcttgtc
gatgcgtttgcattgtcactgagtacgttggagcagcaaatggttcaggaaaaagacaga
gatccagtcagagatccagacacttcaatgttcatagagatagagggagagatgagcgct
gtgtgtctacagtatcctgcgtttgatggggatcacggtacaagctcaagtgtgagtgtg
ttggacaaactgatacacacacaccccatctggcttctgctttccatcgaccagcaagag
gccactggcatcctacagcagcaacaagctggggtgtttttggtctggaggtcatctgtc
ctgcaaaaaaaggtcttgtcatttcatacggatggtacctcagactcctctgtgattcac
atccctgtaaaggagagccattacagtatttcagcattttctctggagggctcaggaatt
agttttgctgacctctttcatcttgtggccttttattgtattagcagagacattctgcca
tctaccctgaagcttcctgaggaaatacactcagctgagaccctgtcagaactgcatgag
gtggcccagcaaggggcagctttctgggaatcttctgccagcaaacaagccccaaagagt
tccctggttctggagagacggacaatctctctgcataggaacttctcactgatagaggat
caaacctgtacccgaactggcaatctaaatgtcccactacctctgactgacacctgcccg
aatgcccccgaaggcaaaagaagttgctccaacagtgctttgtcttttatcaaccctgtc
ttcgtcaagacacagcaagatctaactggaaatgtagcaacaaaagacacaacagcagaa
aacagaaaatctcctccaccaaggccacctccacctcgcattttggttcatacccctgct
ttacccccaggttgtaggactatgctttcaggtgccggcattaccagaacgaaacccaag
tcgatcgccaaacgccccagttctaatcagcctccaccacgacctcctcaaccacctgac
atagacagctaccgctgcaccattgcattagatgatgagaccatctctatggccctgtct
caagccaggcggacgcatacacctctcaactcaaccaacagcaccgttctgcagcaatgg
accggtcctgaagagaaagggcgaagctcaagtggtttgtccacttcctcgtctgactct
ctggattgtcctccgcatcctcttcatttggacccacccaagagtgtaggccaaggcctc
tccacagatgacagcagtgatgagtatgacggagaggaggaagactatggtgtgggactt
gaaagggacctgcatcttcgccttcgttccgcccgcaagacaaaaagactcctggcggtc
gaactagcgggcgctagtccgagatcgctcattatctcacgagcgctaaggggacagttc
cgaaatgttctcaatgttctggctacacctgaaaaacgcatcttgctccagatcattgag
ttgtcccaagacaagggttcctactttggttgcctggtgcaggattatttgagctttgtg
aaggagaacaaaaactgccactcatccagccaggatcttctgcagacgctccggcagttc
atgacccagatgaaggcgtacctcatccagagctcagagattaacccacctattgagtcc
tacatacctgaggaccagattgatccggtgttggagaaggccatgcataagtgtgtgctg
aaaactctgtacggctgcttgcagtcagcgctgcatgagttccaggtggccggaggagtg
tgtcagaggctgcaggagaacctgaccctggccaagaccaaacaccctcacgagctggga
gtgatcggagcccggccaccagacgcccacgccatccaccgcatccgcagaaaactcaga
tctatgtgcagcatgtactcacctgagaggaagatatcggtgctgctgaaagtctgcaaa
ctcatctacactatcatgcaagatcatggagtgaggatgtttggagcggatgatttcctg
cccatgttgacatatgtactgatccagtgtgacatgccacagttggacactgagatcctg
tatatgatggagctgatagatcctccattactgcatggagaagggggttattacctcacc
agtgcatatggagcgatgtcactgattaagaacttccaggaggaacaggctgcgcggatc
ctcagttctacagcgcgcgacacactccaccagtggcaccagcgccgcacactgcagcga
aacctgccctcggtggacgacttccagaattacatgcgtgtggctttgcagaaggcaggt
agcggctgcacggctaaaacccttcaggtccggccctacgccacaacagaagaggtgtgc
cgcctttgtgcacttaaattcagtgtgtctgatccggaaaactacggcctcttccttctc
acagacgacagcagccagcaattggccgcagacacacaaccacagtggattaaggcagag
ttacacagtcgaccgatccctcaacacttttactttgtctacaggaagatagccaacaca
aactgccccacgcctgtgtccgcagagcaggacgatccctga
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