KEGG   Pimephales promelas (fathead minnow): 120491473
Entry
120491473         CDS       T08155                                 
Name
(RefSeq) tubulin alpha chain isoform X1
  KO
K07374  tubulin alpha
Organism
pprm  Pimephales promelas (fathead minnow)
Pathway
pprm04145  Phagosome
pprm04210  Apoptosis
pprm04517  IgSF CAM signaling
pprm04530  Tight junction
pprm04540  Gap junction
pprm04814  Motor proteins
pprm05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:pprm00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    120491473
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    120491473
  09143 Cell growth and death
   04210 Apoptosis
    120491473
  09144 Cellular community - eukaryotes
   04530 Tight junction
    120491473
   04540 Gap junction
    120491473
  09142 Cell motility
   04814 Motor proteins
    120491473
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    120491473
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pprm03019]
    120491473
   03036 Chromosome and associated proteins [BR:pprm03036]
    120491473
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:pprm04812]
    120491473
   04147 Exosome [BR:pprm04147]
    120491473
Messenger RNA biogenesis [BR:pprm03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     120491473
Chromosome and associated proteins [BR:pprm03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     120491473
Cytoskeleton proteins [BR:pprm04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    120491473
Exosome [BR:pprm04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   120491473
  Exosomal proteins of other body fluids (saliva and urine)
   120491473
  Exosomal proteins of colorectal cancer cells
   120491473
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3 DUF7281
Other DBs
NCBI-GeneID: 120491473
NCBI-ProteinID: XP_039545284
LinkDB
Position
Unknown
AA seq 456 aa
MLNSFLQRECISMHVGQAGAQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFS
ETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI
IDLVLDRTRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAVYPA
PQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQI
VSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVSEITNA
CFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNSAIATIKTKRTIQFVDWCPTGFKVG
INYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGME
EGEFSEAREDMAALEKDYEEVGTDSVGEEDEEGEEY
NT seq 1371 nt   +upstreamnt  +downstreamnt
atgttaaactcttttctccagcgtgaatgtatttccatgcacgtcggccaagccggagcc
cagatgggcaatgcatgctgggagttgtattgcctagaacatgggatccagccagatggt
cagatgcccagtgacaaaaccattggaggaggagatgattcctttaacaccttcttcagt
gagactggagctggaaaacatgtcccaagagcagtctttgttgacctggagcccactgtc
attgatgaggtgcgcacaggtacttaccgccagctgttccaccctgagcaattgatcact
ggcaaggaagacgctgccaacaactacgcccgagggcactacaccattggcaaggagatc
attgacttggttttggacaggactcgcaaactggctgatcagtgcactgggctccagggc
ttcctgatcttccacagttttggtggtggcaccggctctgggttcacctccctcctaatg
gaacggctctctgtcgattatgggaagaagtcaaaacttgagtttgccgtctatccagct
cctcaagtgtccacagcagtggtggagccctacaactccatccttaccacccacaccacc
ctcgagcactctgactgtgccttcatggtggacaacgaggccatctacgatatctgccgt
agaaacctcgacattgagcgtcccacctacacaaacctcaacaggctgatcggccagatc
gtttcctccatcacagcatccttgcgtttcgatggagccctaaatgtagatctgaccgag
ttccaaaccaacctggtgccctatccacgtatccacttccctctggccacctacgcccca
gtgatctctgcagaaaaagcctaccatgagcagctgtctgtttcagaaatcaccaatgct
tgcttcgagccagccaatcagatggtgaaatgcgaccctcgtcacggcaagtacatggca
tgctgtctgctgtaccgtggagatgttgtacccaaagatgtcaactctgccatcgccacc
attaaaaccaaacgtactatccagtttgttgactggtgtcccactggattcaaggttggc
atcaactaccagcccccgacggtggttcctggaggagacctggctaaggtgcagcgagcc
gtgtgcatgttgagcaacactacagccattgctgaagcctgggctcgtctggatcacaag
ttcgatctgatgtacgccaagagagcttttgttcactggtatgtgggtgaaggtatggag
gagggagagttctcagaggccagagaagacatggctgccctggagaaggattatgaagag
gtgggcacagacagcgttggagaagaggatgaagaaggagaggagtattaa

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