Pimephales promelas (fathead minnow): 120491493
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Entry
120491493 CDS
T08155
Symbol
ccdc174
Name
(RefSeq) coiled-coil domain-containing protein 174
KO
K25178
coiled-coil domain-containing protein 174
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pprm03019
]
120491493 (ccdc174)
03041 Spliceosome [BR:
pprm03041
]
120491493 (ccdc174)
Messenger RNA biogenesis [BR:
pprm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
120491493 (ccdc174)
Spliceosome [BR:
pprm03041
]
Complex C
Other components
EJC/TREX
120491493 (ccdc174)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4078
Motif
Other DBs
NCBI-GeneID:
120491493
NCBI-ProteinID:
XP_039545317
LinkDB
All DBs
Position
Unknown
AA seq
455 aa
AA seq
DB search
MDKKKKPYTVTASSLVDLKAELYRKQEKFKHDRLGQDAGAAQKSKTKIKKPNIWTKQNEG
VNVRAERDVQQTVEEENTLDKSRQKLEEKARLYEQMTKGDFPDEETESLFLVDFTQKIIN
QRNEPQTYTTRDRDGEDSDVNVPIPDPQNANEEWVDYVDALGRSRRCLRKDLPGFQKMDQ
DFQNKRVTGTDRTLLSDDMRREMQREQWEKEEEEQMKRPVGPIHYENIKEQEARELGVGY
FAFDQDEDRRRKQRETLDMLRDQTTEQRSKREQLKDKRKSLLEARLAKVRMRRLKKSKLE
PGDEEDAPAADGAENDEDEIGPPAKLLKVEVQIQERKDTKPGVPYVREWDRGKEFSWGQW
TSLRREERDSDFAPPSAYFADDRWANHNRATDKGQAKGKPAFKWSESQRATERDTENIST
PSHPSDMPTYAQPSQPQTAQTQSLDDLLSFYKHST
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggataaaaagaagaaaccatacactgttacagcgtcatcgctggttgatttgaaagcg
gaattatatcggaagcaggagaaatttaagcacgacagacttggccaagatgcaggagca
gcacagaagtccaagacaaaaataaaaaagcccaatatctggactaaacaaaatgaagga
gtcaatgtacgagccgagagggacgttcagcaaacggttgaggaagaaaacacactggac
aaatccaggcaaaaattggaggaaaaggctcgtctttatgaacaaatgacaaaaggagat
ttcccagatgaggagactgaaagtctttttctggtggacttcacccagaagatcatcaac
cagaggaatgaaccacagacatacactacacgggaccgagatggagaggactctgatgtg
aacgtccctattccagacccacagaatgcaaatgaagaatgggtggactatgttgatgca
ttaggacgttctcgaagatgtttaaggaaagacctacctggttttcagaaaatggatcaa
gatttccagaacaagagggtgactggcactgacaggacgctgttatctgatgacatgagg
agagaaatgcagcgagagcagtgggagaaagaggaagaggagcagatgaagagacctgtt
ggacccattcactatgaaaatatcaaagagcaagaggccagagagctgggtgttgggtat
tttgcttttgaccaggatgaggaccgacgtagaaaacagagagaaactctagacatgctg
agagatcagaccacagaacagcgcagcaaacgtgagcaactgaaggataagcggaaatcc
cttcttgaagctcgactcgctaaagtgaggatgagaaggctaaagaaaagcaagctggag
ccaggggatgaagaagatgctcctgccgctgatggtgctgagaatgatgaagatgaaatt
ggaccccctgcaaaattgctgaaagtggaagtgcagattcaggaaagaaaagacaccaaa
cctggcgttccatacgtaagggagtgggacagaggcaaagagttctcctggggtcagtgg
accagtcttcgtcgagaggagcgagactccgattttgctcctccctctgcttatttcgcc
gatgacagatgggccaatcacaacagagcaacagacaaagggcaggctaaaggaaaacct
gccttcaagtggtctgaatcccaaagggccaccgaaagagacacagagaacatatctacc
cctagtcatccttctgacatgcccacatatgcacaaccttctcaaccacagactgcacaa
acacagagtctggatgacctgttgtcgttctacaaacactctacgtga
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