Pimephales promelas (fathead minnow): 120491585
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Entry
120491585 CDS
T08155
Symbol
nhej1
Name
(RefSeq) non-homologous end-joining factor 1 isoform X1
KO
K10980
non-homologous end-joining factor 1
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
120491585 (nhej1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pprm03400
]
120491585 (nhej1)
DNA repair and recombination proteins [BR:
pprm03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
120491585 (nhej1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XLF
XLF_CC
XRCC4
Motif
Other DBs
NCBI-GeneID:
120491585
NCBI-ProteinID:
XP_039545462
LinkDB
All DBs
Position
Unknown
AA seq
312 aa
AA seq
DB search
MEEALLALPWVPVNIAGSDLLAKAWFGDTQYRVLLSDLSSVWEEEMNADDIQSRAQDLNK
RLRAPTQAFFSHLCSVARPSFSSQGEDPISAAHVALERHGDNLTVKLKSELAGLPFYWEF
RCTTTPVAVVCRQLVRPLLAVSRVLQRQVEDLAVLLARKDAEIQDYRENGAVLSRARLQT
EAFDVHQHRENFFTQIVPQIGVTLDSLGFDSEMQALYMAVSSGETGRKRKRSPYSSPAAE
DTHVAEHHAPDHLPIAGVASSLASQEQNNVKGSSGRPLVADSKQTVPSTAAGSEERSNSS
RMKKKKAVGLFR
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagccctgcttgccctcccatgggtgccagtgaatatcgctggctctgatctc
ctggctaaagcctggttcggtgacacacagtaccgggttctgctgagtgacctgagctct
gtgtgggaagaagaaatgaatgcagacgacatccagagtcgagcacaggatctgaataag
cgtctaagggctccaacacaggcttttttctctcatctgtgttctgtggcacggccttct
ttctccagccaaggtgaagatccgatctctgctgcacacgttgctcttgaaaggcatggc
gacaatctaacagtcaaactcaaaagtgagctggccgggctgccgttctactgggagttc
cgctgcaccacaacacctgtagccgtggtgtgcaggcagctggtgcgccccctgctggcg
gtgagtagagtcctgcagcggcaggtggaggatctggctgttcttctggctcggaaggat
gctgaaatacaggactatcgggagaacggagctgtcctgagtagagccagactacaaaca
gaggcgtttgacgtgcaccagcacagggagaacttcttcacacagattgttccacagatt
ggtgtgacgctggacagtttgggttttgactccgagatgcaggccctgtacatggccgtg
agctcgggggaaacgggtcggaaacgcaaacgctctccttacagcagccctgcagcagaa
gacacccacgtcgctgaacatcacgcacctgatcacctaccaatcgcaggtgtggcgtct
tcactggcttctcaagaacagaataatgtcaaaggatcatcaggaagacctctggtggca
gatagtaaacagactgttccttcaactgctgctggttctgaggaacgctccaactcctca
cggatgaagaagaagaaagcagttgggctttttcggtga
DBGET
integrated database retrieval system
