Pimephales promelas (fathead minnow): 120491832
Help
Entry
120491832 CDS
T08155
Symbol
sox2
Name
(RefSeq) transcription factor Sox-2
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprm03000
]
120491832 (sox2)
Transcription factors [BR:
pprm03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
120491832 (sox2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
120491832
NCBI-ProteinID:
XP_039545746
LinkDB
All DBs
Position
Unknown
AA seq
315 aa
AA seq
DB search
MYNMMETELKPPAPQPNTGGTGNTNSSGNNQKNSPDRVKRPMNAFMVWSRGQRRKMAQEN
PKMHNSEISKRLGAEWKLLSESEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKTLMKKD
KYTLPGGLLAPGGNAMGAGVGVGAGLGAGVNQRMDSYAHMNGWTNGGYGMMQEQLGYPQH
PGLNAHNTAQMQSMHRYDMSALQYNSMTNSQTYMNGSPTYSMSYSQQSTPGMTLSSMGSV
VKSESSSSPPVVTSSSHSRAGQCQTGDLRDMISMYLPGAEVQDQSAQSRLHMSQHYQSAP
VPGTTINGTIPLSHM
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgtacaacatgatggaaaccgagctcaagcccccggcgcctcagcccaacacggggggc
acggggaacaccaactcctcaggaaacaaccagaaaaacagcccggaccgggtcaagaga
cccatgaacgccttcatggtgtggtcgcggggccagaggaggaaaatggcacaggagaac
cccaaaatgcacaattcggaaataagcaagcgactcggggccgagtggaaacttctgtcc
gagagcgagaagcggccgttcatcgacgaagccaagcgccttcgggctctccacatgaag
gaacacccggattacaaatacagaccccggaggaaaaccaagaccctcatgaagaaggac
aagtacaccctgccgggcgggctcctggcgccgggcgggaacgccatgggcgccggtgtg
ggtgtaggggccggcttgggcgcaggggtcaaccagaggatggacagctacgcgcacatg
aacggctggaccaacgggggctacggcatgatgcaggagcagctcgggtacccgcagcac
ccggggctcaacgcgcacaacacggcgcagatgcagtccatgcaccgctacgacatgagc
gcgctccagtacaactccatgaccaactcgcagacctacatgaacggatcgcccacctac
agcatgtcctactcgcagcaaagcacgccgggaatgacgctgagctccatgggctcggtg
gtcaagtccgagtccagttcgagtccgccggtggtcacgtcgtcctctcactcccgggcc
ggacagtgtcaaacgggggacctgcgggacatgatcagtatgtacctgcccggggccgag
gtgcaggaccagagcgcgcagagcagactgcacatgtcccagcactaccagagcgcgcct
gtgcccggcacgacgattaacggcacgatcccactatcgcacatgtaa
DBGET
integrated database retrieval system
