Pimephales promelas (fathead minnow): 120491834
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Entry
120491834 CDS
T08155
Symbol
ssrp1b
Name
(RefSeq) FACT complex subunit SSRP1 isoform X1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprm03000
]
120491834 (ssrp1b)
03036 Chromosome and associated proteins [BR:
pprm03036
]
120491834 (ssrp1b)
Transcription factors [BR:
pprm03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
120491834 (ssrp1b)
Chromosome and associated proteins [BR:
pprm03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
120491834 (ssrp1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
SSrecog
POB3_N
HMG_box
SSRP1_C
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
120491834
NCBI-ProteinID:
XP_039545753
LinkDB
All DBs
Position
Unknown
AA seq
704 aa
AA seq
DB search
MSDTLEFNEIYQEVKGSWNDGRLRFSKQTVVFKNNKTGKVDSIGVSELTQAQWRRVCLGH
GIKLCTTTGHIYKYDGFKDTDLDKISEYFKANYKVELMEKDMCVKGWNWGTAKFNGPLLS
FEVNDSPAFEIPLSSVSQCATGKNEVTVEFHQNDDTEVSLMEVRFYVPPSTGDEGSDPVE
AFAQNVLSKADVIQATGDAVCIFRELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTV
LRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKEEDISLTLNMNEDEVERRFE
GKLNKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKATSGLLYPLERGF
IYVHKPPVHLRFEEIACVNFARGTTTTRSFDFEIETKQGNQYTFSSIEREEYGKLFDFVN
AKKLSIKNRGFKEKKGMKGNDNMYSDSDDDQHDAYLERMKEEGKIREEGNDSDDSEGESD
ESFNPGEEDDDIAEEYDSKASASESSADGGDSDEDRKKKPAKKAKFVKERKPRKKEKKAK
DINAPKRPMSAYMLWLNSSRDRIKSENPGISVTEISKKAGEMWKQITKDKKEEWEGKAEE
AKKDYERAMREYKESGGGSSSSSKKERKKKGGKNEEKKKKKSGGGKEKEKERVTGNDSFK
SREFISSEESSSESERGKGRKRKGSDDEEEAVSTPPSSEESGSD
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacactcttgaattcaatgaaatttatcaggaggtcaagggcagctggaatgat
ggccgtctgcgcttcagtaagcagacagtggtgtttaaaaacaataagaccgggaaggtg
gacagcattggggtctccgagctcactcaggcccagtggaggagagtctgtctgggtcac
ggcatcaaactgtgcaccaccactggtcacatctacaaatatgatggcttcaaagacact
gaccttgacaagatctctgagtacttcaaagccaactacaaagtggagctgatggagaaa
gatatgtgtgtgaagggctggaattggggaacagctaaatttaatgggccgttgctttca
ttcgaggtaaatgacagtcctgcatttgagattccactctccagtgtatcccagtgtgca
acaggaaagaatgaggtcacggtggagtttcatcagaatgatgacacagaggtatccctc
atggaggtgcgcttctacgtcccccccagcacaggagatgaaggttcagaccctgtggag
gcatttgctcagaacgttttgtccaaagcagatgtcatccaggccacaggagatgctgtg
tgtatcttcagagagttgcagtgtctcacacctaggggcagatacgatatccgtatttat
ccgacattcctccatctgcatggtaagacgtttgactacaagatcccatacaccacagtg
ctccgccttttcctgttgcctcataaagaccagcggcagatgttctttgtgatcagtctg
gacccacccattaaacagggtcaaacccgctaccattttctcattcttctgttctccaaa
gaagaggacatcagcctcactctcaacatgaacgaggatgaggtggagagacgttttgaa
ggaaaacttaataaaaacatgtctggctctctctatgagatggtaagcagagtcatgaag
gccctggtcaacaggaagatcacagtgcctggaaatttccaaggtcactcaggagctcag
tgtataacatgttcatataaggccacttcagggctgttgtatcctttggaaagaggtttt
atctatgtgcacaagcctccggtgcacctccgctttgaagagatcgcctgcgtgaacttc
gcccgtggaaccaccaccactcgctctttcgattttgagattgagaccaagcagggcaat
cagtacaccttcagcagcatcgagagggaagaatatgggaaactctttgacttcgtcaat
gctaagaagttaagcatcaagaacagaggctttaaagagaaaaaggggatgaaaggtaat
gacaacatgtacagcgactcggacgacgaccagcatgatgcgtacctggagcgcatgaaa
gaagagggcaagatccgtgaggagggcaatgacagtgacgactcagagggcgagagtgat
gaatcttttaatcctggagaagaagatgatgatatagcagaggagtatgacagtaaggcc
tctgccagtgaaagcagcgctgatggcggggacagtgatgaagaccgaaagaagaaacca
gccaagaaagctaaatttgtaaaagaaagaaaaccacgcaagaaagagaaaaaggcaaag
gatattaacgcccccaagaggccaatgagtgcctacatgctctggttgaactctagcaga
gaccgcattaaatcagagaacccaggcatctctgtcacagaaatctcaaaaaaagctggg
gaaatgtggaaacaaatcaccaaagacaagaaagaggagtgggaaggaaaagcagaggaa
gcaaagaaagactatgagcgagccatgagagagtacaaggagagtggtggaggatcctca
agcagctctaaaaaggagaggaaaaagaaaggagggaagaatgaagaaaagaagaaaaag
aagtcaggcggtgggaaggagaaagagaaggaacgagtaacaggcaacgacagctttaag
agtcgagagttcatatccagtgaagagagctcatcagagtcagaaagagggaagggacgg
aagcgcaaggggtctgatgatgaagaagaagcggtcagtacaccgccaagctctgaggag
tctggctcagactga
DBGET
integrated database retrieval system
