Pimephales promelas (fathead minnow): 120491871
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Entry
120491871 CDS
T08155
Symbol
rnf13
Name
(RefSeq) E3 ubiquitin-protein ligase RNF13
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pprm04121
]
120491871 (rnf13)
Enzymes [BR:
pprm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120491871 (rnf13)
Ubiquitin system [BR:
pprm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120491871 (rnf13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
PA
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-rbx1
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
zf_RING_Vps8
zf-ANAPC11
DUF7027
STAC2_u1
Prok-RING_4
zf_RING_Vps8_fungal
Hemotin
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
120491871
NCBI-ProteinID:
XP_039545800
LinkDB
All DBs
Position
Unknown
AA seq
377 aa
AA seq
DB search
MLLSLGMLMLSATQIYTIFTVQIFAFLNLLPVEADISAYSFDNKTENFDDLPARFGYRLP
SEGLKGFLIGARPENACVPIEPPPLRDNLSSAFIVLIKRFDCNFDIKVFHAQKAGYKAAI
VHNVDSDDLISMGSNDLDILKQIDIPSVFIGEEAANSLKEDYIYEKGGHVILMPDFSLPL
EYYLIPFLIIVGICLILIVVFMITKFVQDRHRARRSRLRKDQLKKLPIHKFKKGDSYDVC
AICLDEYEEGDKLRVLPCSHAYHCKCVDPWLTKTKKTCPVCKQKVVPSDGDSESESDSGD
SGGEENEVSENTPLLRSLASTSAHSFGTMSGSPSQREVESSDYDEHSDTTDSEEEVTVET
VVVQLQQGRPDNMEADA
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgctgctctctttggggatgctgatgctctctgccacacagatttacaccattttcacg
gtgcagatatttgccttcctcaatcttctgcccgtggaggctgacatctcagcttattcg
ttcgacaataaaacggagaactttgatgacctgccggctcggtttggctacaggctgccc
agtgaaggactgaagggtttcctgatcggggcccgtcccgagaacgcctgcgtgccgatc
gagcctcctcccctgagggacaacctctccagcgccttcatcgtgctcatcaagcgcttc
gactgcaacttcgacatcaaggtcttccatgcgcagaaggccggctacaaggcggcgatt
gtccacaatgtggactcggatgacttaatcagcatgggatccaatgatctggatatcctg
aagcagatcgacataccatcagtgtttattggggaagaagcggccaactctctgaaagag
gattacatctatgagaaaggcggtcatgtgatcctgatgccggacttcagtttgcctctg
gagtactacctgatcccgttcctcatcatcgttgggatctgcctcatcctcattgtagtt
ttcatgatcacaaagttcgtacaggaccgacatagagccaggagaagtcgcttacgcaag
gaccagctgaagaagctccccattcacaagttcaagaaaggcgattcctatgatgtttgt
gccatttgcctggatgagtatgaagagggcgacaagcttcgggtcctgccctgctcacac
gcctatcactgcaagtgtgttgatccgtggctgaccaaaaccaagaagacgtgtccggtg
tgcaagcagaaagtggtgccgtccgacggcgactctgagtccgagtccgactccggggac
agcggaggcgaggagaacgaagtttcggaaaacacgcccctgctgcgatccctggcctct
accagcgcccattcctttggcaccatgtccggctctccatcccagcgcgaagtggagtcg
tcggactacgacgagcacagcgacaccactgacagcgaggaggaggtcaccgtggaaacg
gtcgtcgtacagctgcaacagggccgtcccgacaacatggaggccgacgcttaa
DBGET
integrated database retrieval system
