Pimephales promelas (fathead minnow): 120491932
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Entry
120491932 CDS
T08155
Symbol
col10a1b
Name
(RefSeq) collagen alpha-1(X) chain
KO
K19479
collagen type X alpha
Organism
pprm
Pimephales promelas (fathead minnow)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
120491932
NCBI-ProteinID:
XP_039545889
LinkDB
All DBs
Position
Unknown
AA seq
659 aa
AA seq
DB search
MDLRVTSIVLLLVVLAEATPDRYYHVKKQSYPTKSQTVAGEPGIPGAPGEPGPPGPSGPP
GMPGKNGVGHTGPVGPPGPPGPAGYSSPGKPGSPGLSGKPGSPGYPGEKGQPGPAGPQGA
RGVPGSPGSPGPAGLSSAGKPGPHGLPGAMGPRGETGLKGHPGIPGLPGQKGEPGHGIPG
GPGSPGPMGPMGPSGQPGQPGIGKPGPSGFPGEPGKSGMPGRDGSPGPMGIPGPKGHTGA
PGIGAPGKPGQNGAPGMPGSMGQKGPQGPAGQPGAPGIPGIGKPGSPGLPGDRGVPGTSG
TTGQKGEPGPMGHTGHPGAIGPIGQAGPQGSRGFQGEAGPQGAKGDIGMVGAPGQRGAKG
EQGAQGFSGKPGIPGAAGPPGPMGHMGHQGSKGEPGFTGAPGIPGSKGPPGDKGHPGLQG
QPGGRGENGIPGARGATGPVGPSGPPGLKGHPGLPGPPGPAGLTSKGISGPQGPPGVPGA
RGHDGHPGKPGPPGAPGPPGEIVYHHEKSMPIKSHEMVMPVSHEVMKAPMSAFTALLTTA
YPNAGTPIAFNQIVYNGENHYDPNTGIFTCQVPGLYYFSFHMHVNGANALVALYKNSEPV
MFSYDEYNKGFLDQMSGSSVLMLDSHDTVYIQVPDDQSNGIYADENVHCSFSGFLIATT
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atggacctccgggtaacaagcattgtccttctccttgtggtactggctgaggcgacccct
gacagatactatcatgtgaagaaacagtcttatcctacaaaatctcaaactgttgctggt
gaacctggtattccaggtgccccaggtgaacctggcccccccggcccatctggcccacca
ggaatgcctggaaagaatggtgttggacacaccggtccggttggtccacctggaccacca
ggcccagcaggatactcctcacctggtaaacctggaagtccaggtttatctggaaaacca
ggttcacctggatatccaggcgagaagggacaaccagggcctgcaggacctcaaggtgca
agaggagtgccaggatcccctggaagccctggacctgctggcctatcttctgctggaaag
cctggaccacacggtcttccaggagcaatgggcccacgtggagaaactggcttaaagggt
catcctggaattcctggactgccaggccagaaaggagaacctggccacggtattccaggg
ggacctggtagcccaggtccaatgggccctatgggtccttctggtcagcccggtcagcct
ggaattggaaaaccaggaccaagtggattccctggagagcctggaaagtcaggaatgcca
ggtagagatgggtcaccaggtcctatgggcattccaggcccaaagggtcatacaggagca
cctggaataggagcaccaggaaaaccaggccagaacggcgctccaggaatgcccgggtca
atgggacaaaaaggtcctcaaggaccagcaggacagccaggggctccaggtattccaggt
attggcaaacctggatcacctggactgccaggagatcgtggagtgccaggaacctcgggt
acaacaggccaaaagggagaaccagggccaatgggtcacacaggtcatccaggtgctatt
ggcccaattggtcaagctggtcctcaaggttccaggggattccaaggagaagcaggtcca
cagggagctaaaggtgacattggtatggttggggcaccaggccaaagaggtgcaaagggt
gagcaaggggcacaaggcttctcggggaaacctggtattccaggtgcagcaggtcctcca
ggcccaatgggccatatgggacatcaaggttctaagggcgaaccaggatttaccggtgct
ccaggtatccccggtagcaaggggccaccaggtgataagggacatccaggacttcagggg
caaccaggtggaaggggtgaaaatggtatccctggagcaagaggagcaacaggtccagta
ggaccttctggtccaccagggcttaagggtcacccaggacttccaggcccccctggccct
gcagggctcacatccaagggaatttctggacctcagggtcctcctggtgtccctggtgcc
aggggtcatgatggtcacccgggtaaaccaggacctcctggggcacctggccccccaggt
gagattgtttaccaccacgagaaaagcatgccaattaaatcccacgagatggtaatgcct
gttagtcacgaggtgatgaaggcacccatgtcagcattcacagctcttcttaccacagct
tatcctaatgctggaacaccaattgcattcaaccaaattgtatacaatggagagaaccac
tatgatcctaacactggcatattcacctgtcaggttccaggactttactacttttctttc
catatgcatgtcaatggagcaaatgcattggtagcactttacaagaacagcgagccagtc
atgttctcttacgatgagtacaacaaaggtttccttgaccagatgtctggcagttctgtc
ctcatgctggattcccatgacacagtgtacatccaggttcccgatgaccagtccaatggc
atttatgctgatgaaaatgttcactgttctttctctggcttcttgattgccacaacgtga
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