Pimephales promelas (fathead minnow): 120491990
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Entry
120491990 CDS
T08155
Name
(RefSeq) pre-mRNA-processing factor 39-like
KO
K13217
pre-mRNA-processing factor 39
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pprm03041
]
120491990
Spliceosome [BR:
pprm03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
120491990
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
NRDE-2
TPR_16
TPR_19
TPR_MalT
Baculo_PP31
HrpB1_HrpK
Motif
Other DBs
NCBI-GeneID:
120491990
NCBI-ProteinID:
XP_039545982
LinkDB
All DBs
Position
Unknown
AA seq
748 aa
AA seq
DB search
MEDSAEPMTGMLDTNAPDNGDSSAMEGSEPTAPDWTTAPAPPPEPETHESHEQLQLFSLE
HLKSAAENIDPKTSPSDPVLENSDPVDRQQTESNGDVVDQSMVPDPVKQEGDSESPSNME
LEDAPKEVPAEPGAETAAEPAEPQEPEFPTEYERLSKVVEENPEDFNGWVYLLQYVEQEN
HLVASRKAFDSFFLHYPYCYGYWKKYADIERKHGYIQMADEVYRRGLQAIPLSVDLWLHY
ITFLRENQDTSDGEAENRIRASYEHAVLACGTDFRSDRLWEAYIAWETEQDKLANVTAVY
DRILCIPTQLYSQHFQKFKEHVQSNNPKHFLSEEEFVALRVELANANKPSGDDAPGEELP
PGTEDLPDPAKRVTEIENMRHKVIETRQEVFNHNEHEVSKRWAFEEGIKRPYFHVKALEK
TQLHNWREYLDFELENGTPERVVVLFERCLIACALYEEFWIKYAKYLESYSTEGVRHIYK
KACTVHLPKKPTVHLLWAAFEEQQGSIEDARSILKAFEEAVPGLAMVRLRRVSLERRHGN
MDEAEALLRDAITNGKNSSESSFYAVKLARQMVKVQKSIGKAKKVLMEAVERDETNPKLY
LNLLELEYSGDIQQNEPEIIACFDRALSSSMPLESRVTFSQRKVEFLEDFGSDINVLVAA
YEQHQRLEAEQETLKRKAENGSEEPDAKRQRTDDQSAASGQMMDMTANSAGYNYNNWYQQ
YNSWGAQNSWGQYGQYGQYNQYYPPPPT
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atggaagattctgctgagcccatgaccgggatgttggacacgaatgcccctgataatggg
gactcgtctgcgatggagggctcagaaccgaccgcacccgactggaccacggcgccggct
cctcccccagaaccggaaacccacgagtcccacgagcagttacagctgttctcgctggag
catctcaagtccgcagcggaaaacatcgacccgaagaccagtccgtctgaccccgttctg
gaaaactcagacccggttgacaggcagcagacggaatcgaacggggacgtcgtggaccaa
tcgatggtgccggatccggtgaaacaggagggagactccgagagcccttccaatatggag
ctggaagatgctcccaaagaagtgcccgcagaaccaggagccgaaaccgcagcagaacca
gccgaaccgcaagaacccgagtttcccacagagtacgagcgtctttcgaaggtcgtggaa
gagaatccggaagactttaatggatgggtctaccttctgcagtatgtggagcaagagaac
cacctggtggcgtcgaggaaggcgtttgattcgttcttcctgcactatccgtactgttat
gggtactggaagaaatacgctgatattgagcggaaacatggttacatccagatggccgat
gaggtgtaccggcgaggtcttcaggccatcccgctcagcgtggacctgtggcttcattac
atcacgttcctgcgagagaaccaggacaccagcgacggggaggcggagaaccgcatccga
gcgtcctatgagcacgcggttctagcgtgcggcacggacttccgctcggaccgtctgtgg
gaggcatacatcgcctgggagacggagcaggacaagctggccaacgtcacggccgtgtac
gaccggatcctctgcatccccacacagctgtactcgcagcacttccagaagttcaaagaa
cacgtgcagagcaacaaccccaagcacttcctgtcggaggaggagttcgtggccctgaga
gtggagctagctaacgctaacaagcctagcggagacgacgcccctggcgaagagctgccg
ccgggaacggaggacctgccggatcccgcaaagagagtgacggagatcgagaacatgagg
cacaaggtgatcgagacccggcaggaggtgttcaaccacaacgagcatgaagtcagcaag
cgctgggccttcgaggaggggatcaagcgcccgtacttccacgtgaaggccctggagaag
acgcagctccacaactggagggagtacctggacttcgagctggagaacgggacgccggag
cgcgtggtggttctgttcgagcgctgcctgatcgcctgcgcgctgtacgaggagttctgg
atcaagtatgccaagtatctggagagctacagcaccgagggcgttcggcacatctataag
aaggcttgcacggtccaccttcccaagaaacccaccgtccacctgctctgggcggccttt
gaggagcagcaaggcagcatcgaggacgcccggagcatcctgaaggcgttcgaggaggcc
gtgccgggactggccatggtgaggctgaggcgggtgagtctggagcgccggcacgggaac
atggacgaggccgaggccctgctgcgagacgccatcaccaacgggaagaacagcagcgag
tcctcgttctacgccgtgaagctggcgcggcagatggtcaaagtgcagaagagcatcggc
aaggccaagaaagtgctgatggaggccgtcgaacgagacgagacgaacccgaagctgtac
ctgaacctgcttgagctggagtacagcggagacatccagcagaacgagcccgagatcatc
gcgtgcttcgaccgggcgctgagcagctccatgcccctcgagtcacgcgtcaccttctcc
caacgcaaggtcgagttcctcgaggacttcggcagtgacatcaacgtacttgtggcggca
tacgaacagcatcagcggctcgaggcggagcaggagacgctaaagaggaaagcagagaac
ggctcagaggagccggacgcgaagagacagcgaacagacgaccaatcagcggcctcgggt
cagatgatggacatgacggccaacagtgcaggatacaactataacaactggtatcagcaa
tataactcatggggagctcagaattcctggggtcagtacggtcaatacggtcagtataac
cagtactacccaccgcctcccacataa
DBGET
integrated database retrieval system
