Pimephales promelas (fathead minnow): 120491992
Help
Entry
120491992 CDS
T08155
Name
(RefSeq) pre-mRNA-processing factor 39-like
KO
K13217
pre-mRNA-processing factor 39
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pprm03041
]
120491992
Spliceosome [BR:
pprm03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
120491992
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
NRDE-2
TPR_16
TPR_MalT
TPR_15
DUF2383
Baculo_PP31
Motif
Other DBs
NCBI-GeneID:
120491992
NCBI-ProteinID:
XP_039545985
LinkDB
All DBs
Position
Unknown
AA seq
748 aa
AA seq
DB search
MEDSAEPMTGMLDTNAPDNGDSSAMEGSEPTAPDWTTAPAPPPEPETHESHEQLQLFSLE
HLKSAAENIDPKTSPSDPVLENSDPVDRQQTESNGDVVDQSMVPDPVKQEGDSESPSNME
LEDAPKEEPAEPGAETAAEPAEPQEPEFPTEYERLSKVVEENPEDFNGWVYLLQYVEQEN
HLVASRKAFDSFFLHYPYCYGYWKKYADIERKHGYIQMADEVYRRGLQAIPLSVDLWLHY
ITFLRENQDTSDGEAENRIRASYEHAVLACGTDFRSDRLWEAYIAWETEQDKLANVTAVY
DRILCIPTQLYSQHFQKFKEHVQSNNPKHFLSEEEFVPLRVELANANKPSGDDAPGEELP
PGTEDLPDPAKRVTEIENMRHKVIETRQEVFNHNEHEVSKRWAFEEGIKRPYFHVKALEK
TQLHNWREYLDFELENGTPERVVVLFERCLIACALYEEFWIKYAKYLESYSTEGVRHIYK
KACTVHLPKKPTVHLLWAAFEEQQGSIEDARSILKAFEEAVPGLAMVRLRRVSLERRHGN
MDEAEALLRDAITNGKNSSESSFYAVKLARQMVKVQKSIGKAKKVLMEAVERDETNPKLY
LNLLELEYSGDIQQNEPEIIACFDRALSSSMPLESRVTFSQRKVEFLEDFGSDINVLVAA
YEQHQRLEAEQETLKRKAENGSEEPDAKRQRTDDQSAASGQMMDMTANSAGYNYNNWYQQ
YNSWGAQNSWGQYGQYGQYNQYYPPPPT
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atggaagattctgctgagcccatgaccgggatgttggacacgaatgcccctgataatggg
gactcgtctgcgatggagggctcagaaccgaccgcacccgactggaccacggcgccggct
cctcccccagaaccggaaacccacgagtcccacgagcagttacagctgttctcgctggag
catctgaagtccgcagcggaaaacatcgacccgaagaccagtccgtctgaccccgttctg
gaaaactcagacccggttgacaggcagcagacggaatcgaacggggacgtcgtggaccaa
tcgatggtgccggatccggtgaaacaggagggagactccgagagcccttccaatatggag
ctggaagatgctcccaaagaagagcccgcagaaccaggagccgaaaccgcagcagaacca
gccgaaccgcaagaacccgagtttcccacagagtacgagcgtctttcgaaggtcgtggaa
gagaatccggaagactttaatggatgggtctaccttctgcagtatgtggagcaagagaac
cacctggtggcgtcgaggaaggcgtttgattcgttcttcctgcactatccgtactgttat
gggtactggaagaaatacgctgatattgagcggaaacatggttacatccagatggccgat
gaggtgtaccggcgaggtcttcaggccatcccgctcagtgtggacctgtggcttcattac
atcacgttcctgcgagagaaccaggacaccagcgacggggaggcggagaaccgcatccga
gcgtcctatgagcacgcggttctggcgtgcggcacggacttccgctcggaccgtctgtgg
gaggcttacatcgcctgggagacggagcaggacaagctggccaacgtcacggccgtgtac
gaccggatcctctgcatccccacacagctgtactcgcagcacttccagaagttcaaagaa
cacgtgcagagcaacaaccccaagcacttcctgtcggaggaggagttcgtgcccctgcga
gtggaactagctaacgctaacaagcctagcggagacgatgcccctggcgaagagcttccg
ccgggaacggaggacctgccggatcccgcaaagagagtgacggagatcgagaacatgagg
cacaaggtgatcgagacccggcaggaggtgttcaaccacaacgagcatgaagtcagcaag
cgctgggccttcgaggaggggatcaagcgcccgtacttccacgtgaaggccctggagaag
acgcagctccacaactggagggagtacctggacttcgagctggagaacgggacgccggag
cgcgtggtggttctgttcgagcgctgcctgatcgcctgcgcgctgtacgaggagttctgg
atcaagtatgccaagtatctggagagctacagcaccgagggcgttcggcacatctataag
aaggcttgcacggtccaccttcccaagaaacccaccgtccacctgctctgggcggccttt
gaggagcagcaaggcagcatcgaggacgcccggagcatcctgaaggcgttcgaggaggcc
gtgccgggactggccatggtgaggctgaggcgggtgagtctggagcgccggcacgggaac
atggacgaggccgaggccctgctgcgagacgcgatcaccaacgggaagaacagcagcgag
tcctcgttctacgccgtgaagctggcgcggcagatggtcaaagtgcagaagagcatcggc
aaggccaagaaagtgctgatggaggccgtcgaacgagacgagacgaacccgaagctgtac
ctgaacctgcttgagctggagtacagcggagacatccagcagaacgagcccgagatcatc
gcgtgcttcgaccgggcgctgagcagctccatgcccctcgagtcacgcgtcaccttctcc
caacgcaaggtcgagttcctcgaggacttcggcagtgacatcaacgtacttgtggcggca
tacgaacagcaccagcggctcgaggcggagcaggagacgctaaagaggaaagcagagaac
ggctcagaggagccggacgcgaagagacagcgaacagacgaccaatcagcggcctcgggt
cagatgatggacatgacggccaacagtgcaggatacaactataacaactggtatcagcaa
tataactcatggggagctcagaattcctggggtcagtacggtcaatacggtcagtataac
cagtactacccaccgcctcccacataa
DBGET
integrated database retrieval system
