Pimephales promelas (fathead minnow): 120492014
Help
Entry
120492014 CDS
T08155
Symbol
cdc40
Name
(RefSeq) pre-mRNA-processing factor 17
KO
K12816
pre-mRNA-processing factor 17
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120492014 (cdc40)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pprm03041
]
120492014 (cdc40)
Spliceosome [BR:
pprm03041
]
Complex C
Other components
Step II factors
120492014 (cdc40)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
NBCH_WD40
WDR54
Motif
Other DBs
NCBI-GeneID:
120492014
NCBI-ProteinID:
XP_039546014
LinkDB
All DBs
Position
Unknown
AA seq
578 aa
AA seq
DB search
MAATERGLVSYGSDSDSENESESRTSPQKVEPDSVAHLQPLKSAKIMTLALLNSAPEVAV
KEDVETGVHLDPALKEVTYNPTYETMFAPEFGPVNPFRSQQMAAPRNMLSGYAEPAHVND
FMFEQQRRTFSTFGYALDPSVDTSQVSSSCYIGAVEEAEKNKGLTVFETCPKKSEKRRKV
KGGDASDIDCFLGPWAKYQDEKDVAKPSEEEQKELDEITAKRQKRGKNEEEAPAEEKTIL
HIKDAYDYQGRSYLHIPQDVGINLRSPDIPDKCYLPKKQLHVWTGHTKGVSAIRLFPASG
HLLLSCSMDCKIKLWEVYNERRCVRTFIGHSKAVRDVCFNNTGTQFLSAAYDRYIKLWDT
ETGKCIAPFTNKKVPYCVKFNPDEEKQNLFVAGMSDKKIVQWDIRTREVVQEYDRHLGAV
NTITFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQSM
DNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMSYVVSGDADGKLNIWDWKTTK
LYHRIKAHDKVCISALWHPHETSKVITCGWDGLIKLWD
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgacagagagaggcctcgtttcgtacggcagcgactcagactcggaaaatgag
tcagaatcccgcactagtccgcagaaagtcgaaccggactcggtcgcgcatctccagcct
ttaaaatccgccaaaataatgactttagcccttctaaattcagcgcccgaggtcgccgtg
aaggaagatgttgagaccggtgtgcatcttgatccagcactcaaagaagtcacgtacaac
cctacatatgaaaccatgtttgctccagagtttgggccggtgaacccgttccggtcgcag
cagatggcggctccgaggaacatgctgtcgggttacgccgaaccagctcacgtcaacgac
ttcatgttcgagcagcagaggagaaccttctccacattcgggtatgctctggacccgtca
gtggacaccagtcaggtctcgtccagctgctacatcggagccgtagaagaagccgagaaa
aacaaagggctgacggtgtttgagacgtgcccgaagaagtctgagaagaggaggaaggtg
aaaggaggagacgcgtcggacatcgactgctttctcggcccttgggcaaagtaccaggat
gagaaagacgtggccaaaccctctgaggaggagcagaaggagctggatgagatcacagcc
aagagacagaagagaggcaagaacgaagaagaagctccagcggaggagaagaccatcctt
cacattaaagacgcgtacgactaccagggccgctcgtacttgcacattccccaggacgtg
ggcatcaacctgcgctcgccggacatcccggacaaatgctacctccccaagaaacagctg
cacgtgtggaccggacacactaagggcgtcagtgcgatccgcctgttcccggcgtcgggt
catctgctgctgtcctgctccatggactgcaagatcaagttgtgggaggtgtataacgag
aggagatgtgtgcggacgttcataggtcacagtaaagcggtgcgtgacgtctgcttcaac
aacaccggcacacagttcctcagcgccgcctacgacagatacatcaaactctgggatacc
gagaccgggaagtgcatcgctcccttcaccaacaagaaggtcccgtactgcgtgaagttc
aaccccgacgaggagaagcagaacctgttcgtcgccggcatgtcggacaagaagatcgtc
cagtgggacatccgcacccgtgaggtggttcaggagtacgacaggcatctgggagccgtc
aacaccatcaccttcgtggacgagaaccggcgcttcgtcagcacctccgacgacaagagt
ctgcgcgtgtgggagtgggatattcctgtggactttaagtacatcgctgagcccagtatg
cactcgatgcccgcggtcacgctgtcgcccaacgggaagtggctggcctgtcagtccatg
gacaatcagatcctgatctttggcgctcagaaccggttccgtctcaacaagaagaagatc
ttcaagggccacatggtggcgggatacgcctgtcaggtcgacttctctccggacatgagt
tatgtggtgtcaggtgacgcggacgggaagctgaacatctgggactggaagacgacgaag
ctgtaccatcgcatcaaggcgcacgataaggtgtgtatcagcgcgctctggcaccctcac
gagacctccaaggtcatcacctgtggctgggacgggctgatcaaactctgggactga
DBGET
integrated database retrieval system