KEGG   Pimephales promelas (fathead minnow): 120492014
Entry
120492014         CDS       T08155                                 
Symbol
cdc40
Name
(RefSeq) pre-mRNA-processing factor 17
  KO
K12816  pre-mRNA-processing factor 17
Organism
pprm  Pimephales promelas (fathead minnow)
Pathway
pprm03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pprm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    120492014 (cdc40)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pprm03041]
    120492014 (cdc40)
Spliceosome [BR:pprm03041]
 Complex C
  Other components
   Step II factors
    120492014 (cdc40)
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 NBCH_WD40 WDR54
Other DBs
NCBI-GeneID: 120492014
NCBI-ProteinID: XP_039546014
LinkDB
Position
Unknown
AA seq 578 aa
MAATERGLVSYGSDSDSENESESRTSPQKVEPDSVAHLQPLKSAKIMTLALLNSAPEVAV
KEDVETGVHLDPALKEVTYNPTYETMFAPEFGPVNPFRSQQMAAPRNMLSGYAEPAHVND
FMFEQQRRTFSTFGYALDPSVDTSQVSSSCYIGAVEEAEKNKGLTVFETCPKKSEKRRKV
KGGDASDIDCFLGPWAKYQDEKDVAKPSEEEQKELDEITAKRQKRGKNEEEAPAEEKTIL
HIKDAYDYQGRSYLHIPQDVGINLRSPDIPDKCYLPKKQLHVWTGHTKGVSAIRLFPASG
HLLLSCSMDCKIKLWEVYNERRCVRTFIGHSKAVRDVCFNNTGTQFLSAAYDRYIKLWDT
ETGKCIAPFTNKKVPYCVKFNPDEEKQNLFVAGMSDKKIVQWDIRTREVVQEYDRHLGAV
NTITFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQSM
DNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMSYVVSGDADGKLNIWDWKTTK
LYHRIKAHDKVCISALWHPHETSKVITCGWDGLIKLWD
NT seq 1737 nt   +upstreamnt  +downstreamnt
atggcggcgacagagagaggcctcgtttcgtacggcagcgactcagactcggaaaatgag
tcagaatcccgcactagtccgcagaaagtcgaaccggactcggtcgcgcatctccagcct
ttaaaatccgccaaaataatgactttagcccttctaaattcagcgcccgaggtcgccgtg
aaggaagatgttgagaccggtgtgcatcttgatccagcactcaaagaagtcacgtacaac
cctacatatgaaaccatgtttgctccagagtttgggccggtgaacccgttccggtcgcag
cagatggcggctccgaggaacatgctgtcgggttacgccgaaccagctcacgtcaacgac
ttcatgttcgagcagcagaggagaaccttctccacattcgggtatgctctggacccgtca
gtggacaccagtcaggtctcgtccagctgctacatcggagccgtagaagaagccgagaaa
aacaaagggctgacggtgtttgagacgtgcccgaagaagtctgagaagaggaggaaggtg
aaaggaggagacgcgtcggacatcgactgctttctcggcccttgggcaaagtaccaggat
gagaaagacgtggccaaaccctctgaggaggagcagaaggagctggatgagatcacagcc
aagagacagaagagaggcaagaacgaagaagaagctccagcggaggagaagaccatcctt
cacattaaagacgcgtacgactaccagggccgctcgtacttgcacattccccaggacgtg
ggcatcaacctgcgctcgccggacatcccggacaaatgctacctccccaagaaacagctg
cacgtgtggaccggacacactaagggcgtcagtgcgatccgcctgttcccggcgtcgggt
catctgctgctgtcctgctccatggactgcaagatcaagttgtgggaggtgtataacgag
aggagatgtgtgcggacgttcataggtcacagtaaagcggtgcgtgacgtctgcttcaac
aacaccggcacacagttcctcagcgccgcctacgacagatacatcaaactctgggatacc
gagaccgggaagtgcatcgctcccttcaccaacaagaaggtcccgtactgcgtgaagttc
aaccccgacgaggagaagcagaacctgttcgtcgccggcatgtcggacaagaagatcgtc
cagtgggacatccgcacccgtgaggtggttcaggagtacgacaggcatctgggagccgtc
aacaccatcaccttcgtggacgagaaccggcgcttcgtcagcacctccgacgacaagagt
ctgcgcgtgtgggagtgggatattcctgtggactttaagtacatcgctgagcccagtatg
cactcgatgcccgcggtcacgctgtcgcccaacgggaagtggctggcctgtcagtccatg
gacaatcagatcctgatctttggcgctcagaaccggttccgtctcaacaagaagaagatc
ttcaagggccacatggtggcgggatacgcctgtcaggtcgacttctctccggacatgagt
tatgtggtgtcaggtgacgcggacgggaagctgaacatctgggactggaagacgacgaag
ctgtaccatcgcatcaaggcgcacgataaggtgtgtatcagcgcgctctggcaccctcac
gagacctccaaggtcatcacctgtggctgggacgggctgatcaaactctgggactga

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