Pimephales promelas (fathead minnow): 120492021 Help Entry 120492021         CDS       T08155                                  Symbol fdft1 Name (RefSeq) squalene synthase isoform X1   KO K00801   farnesyl-diphosphate farnesyltransferase [EC:2.5.1.21] Organism pprm  Pimephales promelas (fathead minnow) Pathway pprm00100   Steroid biosynthesis pprm01100   Metabolic pathways Module pprm_M00101   Cholesterol biosynthesis, FPP => cholesterol Brite KEGG Orthology (KO) [BR:pprm00001]  09100 Metabolism   09103 Lipid metabolism    00100 Steroid biosynthesis     120492021 (fdft1)  09180 Brite Hierarchies   09181 Protein families: metabolism    01006 Prenyltransferases [BR:pprm01006]     120492021 (fdft1) Enzymes [BR:pprm01000]  2. Transferases   2.5  Transferring alkyl or aryl groups, other than methyl groups    2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)     2.5.1.21  squalene synthase      120492021 (fdft1) Prenyltransferases [BR:pprm01006]  Terpene biosynthesis   Squalene/phytoene synthase    120492021 (fdft1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  SQS_PSY GBP_C GST_C_8 Octopine_DH TM1266-like Motif Other DBs NCBI-GeneID:  120492021 NCBI-ProteinID:  XP_039546024 LinkDB All DBs Position Unknown AA seq 448 aa AA seqDB search MAGVCGKSAVSLSVLKRSFSLQRGCPWPVLAGARRCAMEGRSLAVPPHPFRAHRHPAYVC FSCQDSMTETLRTCYSYLNQTSRSFSAVIQALDGELRHAVCIFYLVLRALDTVEDDMTIP LEKKVPMLHDFHSFLYQPEWSFSESREKDRQVLEDFPTISVEFRNLGQEYRDVISDICHR MGVGMAEFLEKKVSSMKEWDKYCHYVAGLVGIGLSRLFSASQLEDAEVGRDTELANSMGL FLQKTNIIRDYLEDQQQGRAFWPQEAWSQFASRLEDFAQPQNLSSALSCLNLLVTDALRH VPDVIAYLSRLRNQSVFNFCAIPQVMAIATLSACYNNPQVFQGVVKIRKGQAVTLMMQAT NMAAVQSIITQYSQEILQKVSITDPSREQTLCVLNLIHEKSVSRAALSSRAHHISPVCVS AAMILAALSWQYLNATTGPAGGADMQGH NT seq 1347 nt NT seq  +upstreamnt  +downstreamnt atggctggtgtttgcgggaagagcgccgtgtcgctgtccgtgctcaagcgctcgttctcg ctgcagcgcgggtgcccgtggcctgtgctcgcgggcgcgcggcgctgcgccatggaagga cggtcactggcggttcctcctcacccgttcagggctcatcgacaccccgcttatgtgtgc ttctcctgccaggactcgatgactgaaaccctgcggacctgctattcgtatctaaaccag accagccggagtttctccgcggtgatccaggccctggatggagagttacggcatgccgtg tgtattttctacctggttcttcgagccctggacacggtggaagacgacatgaccatcccg ctggagaagaaggtcccgatgctgcacgacttccactcgttcctctatcagcccgagtgg agcttcagcgagagccgagagaaagaccggcaggtcctggaggatttccccacgatttca gtggagttcaggaatttaggccaagagtatcgggacgtgatttcggacatctgtcaccgg atgggtgtgggaatggctgaattcctggagaagaaagtctcttcaatgaaggagtgggac aaatactgtcattacgtggcgggtctggtggggatcggactgtcccgactgttttcggcg tcccagctcgaggacgctgaggtgggccgggacacagagctggccaactccatgggcctg ttcctccagaagaccaacatcatcagggactatctggaggaccagcagcagggacgggcc ttctggccgcaggaggcctggagtcagtttgcgtcccgtctggaggattttgcgcagcct caaaacctgagctctgccctgtcctgcctcaacctgctggtgaccgacgcccttcgccac gtccctgatgtcatcgcgtacctgtcccgcctccgcaaccagagcgtcttcaacttctgc gccattcctcaggtgatggcgatagcgactctgtctgcgtgctacaacaatcctcaggtg tttcagggcgtggtgaagatccggaagggtcaggcggtgacgctcatgatgcaggccaca aacatggccgccgttcagagcatcatcacacagtacagtcaggagatcctgcagaaagtc tccatcacggatccgtcccgggaacaaacgctgtgtgtcctgaatctgatccatgagaag agtgtgtcccgagcggcgctgtcgtcccgagcgcatcacatctctccggtgtgtgtgtcg gcagcgatgatactggcggccctcagctggcagtacctgaacgccaccacggggccagca gggggcgccgacatgcaggggcactga

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