Pimephales promelas (fathead minnow): 120492024
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Entry
120492024 CDS
T08155
Symbol
irf4l
Name
(RefSeq) interferon regulatory factor 4
KO
K09445
interferon regulatory factor 4
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprm03000
]
120492024 (irf4l)
Transcription factors [BR:
pprm03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
120492024 (irf4l)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IRF
IRF-3
IQCJ-SCHIP1
Motif
Other DBs
NCBI-GeneID:
120492024
NCBI-ProteinID:
XP_039546033
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All DBs
Position
Unknown
AA seq
420 aa
AA seq
DB search
MSGSSGNGKLRQWLIEQVDSGKYPGLVWEDPERSTFRIPWKHAGKQDYNRDEDAALFKAW
ALFKGKYREGIDKADPPTWKTRLRCALNKSSDFEELVGRSQLDLSEPFKVYRVIPEGSKR
GPKPYEKVSTSSVHQNYPFCPSYQPVEAQVFNFLSVPDRSWRDFLCEQNSLSDTHSSQNS
RWDTGYQISGSFYSCNTFDSPPSPFSLETSMRSAEAMALSDPRLQVTVFSGETLFADVTV
TSVEGCRLAPPPDSWSPGGPELVPLPQEERGALEGGVLLWMTPDGLYARCFCQSQVYCDT
THTHLRDKLGQLEREQTSKVLDTQIFLTELQAYFLHARPPPRFYVQLFFESCDPSADKRP
LTVQVEPLFARQMTLLLQQGGVGYTRSTYELSPLTPEQIYTHPDFPAINGHQTHGNFIQQ
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggaagctccgggaacgggaagctgcgtcagtggctgattgaacaggtggattct
gggaaataccccgggttagtgtgggaggacccggagcgaagcaccttcaggatcccgtgg
aaacacgcggggaagcaggactataaccgggacgaggacgcggcgctcttcaaggcctgg
gctctgttcaaagggaagtatcgtgagggaatcgataaggcggatcctccgacctggaag
acgcgtctccggtgcgcgctgaacaagagcagcgacttcgaggagctcgtgggccgaagc
cagctggacctatcagaacccttcaaagtctaccgggttattcctgagggaagcaaaaga
ggaccaaaaccatatgagaaagtttccacaagctcagttcaccaaaactacccgttctgt
ccctcatatcagcctgtggaggctcaggtgttcaacttcctgtcagttcctgaccgaagc
tggagggacttcctgtgtgagcagaactcactgtcagacactcactccagccagaactca
cgctgggacacagggtaccagataagtggatctttctacagctgtaacacatttgactcg
cctccatcaccgttcagcctagagaccagcatgagatcagcagaggccatggcactgtca
gacccgcgtctgcaggtgacggtgttcagcggcgagactctgttcgctgacgtcacggtg
acgagtgtcgagggctgtcgactggctcctccccctgacagctggagccccggcggcccc
gagttggttcctcttcctcaggaggagcgaggagcgctggagggaggcgttctgctctgg
atgacgcccgatggcctgtacgcccgctgcttctgccagagccaggtgtactgcgacacg
acacacacacacctgcgcgacaaactcggtcaactagagagggagcagaccagcaaagtc
ctggacacacagatcttcctcacagaactccaggcttatttcctgcacgcacgtcctcct
ccgcgattctacgtgcagcttttcttcgagagctgtgacccctctgcagacaagcgaccc
ctgaccgttcaggtggagccgctgttcgcccggcagatgacgctcctcctccagcagggc
ggcgtcggttacacaagaagcacctatgaactttcacctctgacccctgagcagatttac
acacatccagatttccctgccatcaacggacaccagacgcatgggaacttcatccaacag
tga
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