Pimephales promelas (fathead minnow): 120492122
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Entry
120492122 CDS
T08155
Symbol
htt
Name
(RefSeq) huntingtin isoform X1
KO
K04533
huntingtin
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pprm03019
]
120492122 (htt)
04131 Membrane trafficking [BR:
pprm04131
]
120492122 (htt)
03029 Mitochondrial biogenesis [BR:
pprm03029
]
120492122 (htt)
Messenger RNA biogenesis [BR:
pprm03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
120492122 (htt)
Membrane trafficking [BR:
pprm04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
120492122 (htt)
Mitochondrial biogenesis [BR:
pprm03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
120492122 (htt)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Htt_C-HEAT
Htt_N-HEAT
Htt_bridge
Htt_N-HEAT_1
HEAT
HEAT_GCN1
HEAT_2
HEAT_EF3_N
Vac14_Fab1_bd
HEAT_ECM29
Motif
Other DBs
NCBI-GeneID:
120492122
NCBI-ProteinID:
XP_039546205
LinkDB
All DBs
Position
Unknown
AA seq
3123 aa
AA seq
DB search
MATMEKLMKAFESLKSFQQQQGPLSAEELVQKQKKDLATTKKDRVTHCLTICENIVAQSL
RTSPEFQKLLGIAMEMFLLCSDDKESDVRMVADECLNKIIKALMDSNLPRLQLELYKEIK
KNAASRSLRAALWRFAELAHLVRPQKCRPYLVNLLPCLTRITKRQEETVQETLSSSIPKI
MSALGHFANDGEIKMLLKAFVANLKSSSPTIRRTAASSAVSVCQHSRRTHYFYTWLLNVL
LGLVVPVDEEHSSHLILGVLLTLRYLMPLLQQQAPNSSLKGSFGLVRKEADVTPAPEQLV
QVYELTLHYTQHWDHNVVTASLELLQQMFRTPPPELLNALITRGKITLTSVFREETESRA
RSGSILELIAGGSTCSPLLLRKQKGKLLSGEEEGLEDDPERAEVTTGSFTASVGGDSSSE
APSSSGVSSLGTSDIITEQPRSSQHTLQPGDSVDLSASEQGVGPDTPDEEDEEDMLSRSS
SGGAGVVSTTGDLIADGNQMSVGAMSSSPPSDSSQTTTEGPDSAVTPSDCAELVLDGSES
QYSGMQIGTLQDEEEEGAAPQPEKPPEPFSQSALALSKPHLFEGKGHNRQSSDSSVDRFI
PKEEVLEPAELDNKPSRIKGDIGHYTDPKEEPLVHCVRLLSASFLLTGQRNVGLVPDNEV
RVSVKALAVSCVGAAAALLPEAFFNKLYLQPLDGQQPDEQQYISDILQYIEHGDPQIRGA
TAILCGALIQAIQLKTRYNTETWLSQIHSVTGNSLTIENVVPLLQRSLKDESSVTCKMAC
AAVRHCIMALCNGSLSELGLQLLIDLLTLKDCSYWLVRTELLETLAEIDFRLVSFLERKT
EKLHKGEHHYTGLLRLQDRVLNDVVLYLLGDDDPRVRHVAANTVGRLVPRLFYDCDQAQA
DPVVAIARDQSSVYLQLLMHETQPPSQFTVSTITRTYRGYNLCQNAPDVTVENNLSRVIT
AISHALTSSTSRAMTFGCCEALFLLSSTFPVCTWSTGWHCGFVSSSVFHLNRSSQYRSRG
RSFSLSQSGSSEEVRRSLTVGVAGIVLSLLSSAWFPLDLSAHQSALLLAGNLLAAIAPKC
MKSPWAGEEESNTAPSKVEEPWPALNDRSLVVMVEQLFSHLLKILNICAHVLDDTPPGPA
VKATLPSLANTPSLSPIRRKGKEKDMTEPSNTPMSPKKGGETNTGRAVDSTGIAAVNKST
TMGSFYHLPPYLKLYDALRATHTNYKVTLDLHNTNEKFGGFLRSALDVLSQLLELATLHD
IGKSVEEILGYLKSCFSREPTMATVCVQQLLKSLFGTNLASQYEGASSHPCRSQGKAMRL
GSTSVRPGLYHYCFMAPYTHFTQALADASLRNMVQAEQEQDASGWFDVMQKVSSQLRSSI
TNVTRHRGDKNAIHNHIRLFEPLVIKALKQYTTSTSVGLQRQVLDLLSQLVQLRVNYCLL
DSDQVFIGFVLKQFEYIEVGQFKDSEEIVPNIFFFLVLLSYERYHSKQIISIPKIIQLCD
GIMASGRKAVTHAIPALQPIVHDLFVLRGSNKADAGKELETQKEVVVSMLLRLVQHHQVL
EMFILILQQCHKENEDKWKRLSRQIADIILPMIGKQQMHLDSHEALGVLNTLFETVAPSS
LRPVDMLLKSMFITPSTLASVGTGQLWVSGILAILRVLISQSTEDIILSRIQELSLSPYL
LSCPTIRRLCDDDCSPPQAPPDTMEDSNEEPQRFPPEETFARFLLQLVGVLLDDIATKQV
KVDMSEQQHTFYCQQLGTLLMCLIHIFKSGMFRRITAAGSRLLKAEGGEGGHFYTLEGLN
SLVLQLITTHPSLVLLWCQVLLIINYTNYTWWSEVHQTPKRNSLSSTKLLSPHSSGEEER
PEGKLAVCNREIVRRGALILFCDYVCQNLHDSEHLTWLTVNHVSDLISLSHEPPVQDLIS
AVHRNSAASGLFIQAIQSRCDNLSTPVMLKKTLQCLEGIHLSQSGALLMLYVDKLLNTPF
RVLARMVDTLACRRVEMLLAETLQNSIAQLPLEELDRIQQYLQTSGLAQRHQRFFSLLDR
FRATVAEDTTSPVAPITTHPLDGDPPPPPENVEPNKEWYVALVKSQCCLRGEGSLYETTE
LLTKLPQSDLNTIMACKDFNLCLLASCLSIGAQRVCKDHGVVLFDTAKEVAFERLVGVVE
LLPSPHQPLLPSAKTCADYMQKLNQIYGEPGFYQTVLSLCGVLSQYLLSLSKLPSSLHIP
KDRETLIATFSTLAIEVMVWRLLQDQLPLSVDMQMSLSCLCLALQQPAVWTHFASHSYLT
HTCSIIQCIQLLIHAVSVGPGDQLLRPERKTSNTEQSEDQLDSADNQREWRCCEIMAELV
EGLQSVLALGHHRNKNFPAFLTPTLQNVIISLARLPLVNSYTRIPPLVWKLGWSPRPSGD
FGTALPEIPVEFLQEKDVFREFLYRINTLGWSSRTQFEETWATLLGVLVTQPITMDQEEE
TQQEEDLERTQINVLAVQAITSLVLSAMTLPTAGNPAISCLEQQPRNKILKALDTRFGRK
LSVIRGMVEREIQAMVSKRDNIATHFPYQAWDPVPSLSSSTAGTLISHEKLLLQINTERE
MGNMDYKLGQVSIHSVWLGNNITPLREEEWGEDEEDETDAPAPASPPLSPINSRKHRAGV
DIHSCSQFLLELYSQWILPGSPSSRKTPVVLISEVVRSLLAVSDLFTERNQFDMMFSTLT
ELQKVHPPEDEILSQYLVPAICKAAAVLGMDKAIAEPVCRLLESTLRSTHLPSRIGALHG
VLYVLECDLLDDTARQLIPTVSEYLLSNLRAIANCVNLHNQQHVLVMCAVAFYMMENYPL
DVGPEFNAGIIQLCCMMLSGSEEATPSIIYHCVLRGMERLLLSEQLSRMDAETLVKLSVD
RVNMPSPHRAMAALGLMLTCMYTGVAGEEGKEKGSPGRPADADPTAPDSESVIVAMERVS
VLFDRIRKGFPSEARVVARILPQFLDDFFPLQDVMNKVIGEFLSNQQPYPQFMATVVYKV
FQTLHATGQSSMVRDWVLLSLSNFTQRTPVAMAMWSLSCFFVSASTSQWISALLPHVISR
MGKSDTVDISLFCLVAMDFYRHQIDEELDRRAFQSVFEMVASPGSPYYQLLCCLQSIHQD
TTL
NT seq
9372 nt
NT seq
+upstream
nt +downstream
nt
atggccaccatggagaaactgatgaaagcgtttgagtctcttaaatcattccagcagcag
caaggcccgctgtcggccgaggagctcgtccagaaacaaaaaaaagaccttgctacaacc
aaaaaggacagagtgactcattgcttgacgatatgtgaaaacatcgtggcacagtcgctg
aggacatctccagagttccagaaactgctcgggattgctatggaaatgttcttgctgtgc
agcgacgacaaggagtctgacgtcaggatggtggcagatgagtgcctaaacaaaatcatc
aaagcattgatggattccaacttgcctagactgcaacttgaactgtataaagagattaaa
aagaacgctgcctctcggagtctgcgggcagccctgtggaggtttgctgagcttgctcac
ctggtgcgtccacagaaatgcaggccgtaccttgtgaatctgctgccatgtctgacacgg
atcacaaaacgtcaggaggagactgtgcaggaaactctttcttcttcaattcctaaaatc
atgtctgcccttggacacttcgccaatgatggagagataaagatgctgctgaaggccttt
gttgccaacctgaagtccagttctcccactattcgccgaacagcggccagctcggctgtc
agcgtgtgtcagcactcacgcagaacacactacttctacacctggctcctcaacgtgctg
ctcggtttggtagtgccggtggatgaggagcattccagtcacctgattctgggtgtctta
ctgacgttgcgctacctgatgcctctccttcagcagcaggctcctaacagcagtctgaag
ggcagctttgggctcgttcgtaaggaggcagacgtcactcctgctcctgagcaactcgta
caggtctatgaactgaccctgcactacacgcagcactgggatcataatgtggtgacggca
tctctggagcttctgcagcagatgtttcgcactcctccccctgagctcctgaacgcactc
atcacacgtggcaaaatcacactcaccagtgtctttagagaagagaccgagagccgcgca
cgcagtggcagcatcctcgagctcattgccggtgggtcaacatgcagtcctctcctcctc
aggaagcagaaaggtaagctgttgtcaggtgaagaagagggtttggaggatgaccctgag
agggcagaggtcaccaccggatccttcacagcctcggtcggtggcgacagctccagtgaa
gctccctcctcatcaggcgtttcgtctcttggcacatctgacatcatcacagagcagcca
cgctcctcccagcataccctgcagccgggggactcagtggacctgagcgcatcagagcag
ggcgtagggcctgatactcctgatgaggaagatgaggaggacatgctaagccgcagctca
agcgggggcgctggggtcgtcagcacgaccggcgacttaatagctgatggcaaccagatg
tcagtgggagccatgtcatcgtcgccccctagtgacagttcccagacgactactgagggg
ccggactccgccgtgacgccttcagactgcgccgagctcgtgctggatggcagtgagagt
cagtactcagggatgcagatcggcacactgcaggatgaagaagaggagggagcagctcca
caacctgaaaaacctccagagcctttctcccagtcagcactggctttaagtaagccccat
ctttttgaggggaaaggtcacaacaggcaatcatctgacagcagtgtggatcgattcata
ccaaaggaagaggttctggagcctgcagaacttgacaacaagccatctaggattaaagga
gatattggtcactatactgatccaaaggaagagcctcttgtgcactgtgtccggctgctg
tctgcctccttcctgctcaccggccaaagaaatgtagggctggttcctgataatgaggtg
cgtgtgagcgttaaggcgttagccgttagctgtgttggggcagcagcagctcttttacct
gaagccttcttcaacaaactctacctgcagccactagatggacaacaaccagatgagcaa
cagtacatcagtgatatactgcagtacattgaacacggggatcctcagatcagaggagcc
actgccatcctgtgtggggctttaatccaagctatccagctcaagacacgctacaacacg
gagacatggctgtcccaaatccactcggtcacaggaaactctctgacaatcgaaaacgtt
gttcctctgctgcagcgaagtctaaaagatgaatcttcagtcacgtgtaaaatggcctgt
gctgctgttaggcactgtatcatggcattgtgcaatggcagtctcagtgaacttggcctc
caactgctcattgatctgttgaccctgaaggactgctcttattggctggttcgcactgag
ctcttggagacgcttgctgagatagatttccggttagtaagttttttggagagaaaaact
gagaagttgcacaaaggagagcatcactacactgggttgttgaggctgcaggacagagtt
ctgaatgatgttgtactttatctattgggggatgatgacccacgtgtgagacatgtggca
gcaaacactgtcggcaggttggtgcccaggttgttctacgactgtgaccaggctcaagca
gacccggttgtggcaatagcacgagatcagagcagtgtgtacctgcagctgctaatgcac
gagacccagcctccatcacagttcactgtcagcaccatcacacgaacataccgtggctac
aatctgtgtcagaacgcaccagatgttaccgtagagaacaacctatctcgggtcatcact
gccatctcccatgccctcacctcctccacttccagagccatgacttttggctgttgtgag
gctctattccttttgtccagcacgttcccagtgtgcacctggagcacaggctggcactgt
ggctttgtgagctcttctgtctttcatctcaaccgctccagccagtaccgcagccgagga
cgctcctttagtctctctcagtctggcagtagtgaagaggtgcgcaggtctctgacggtt
ggcgtggccggtatagttttgtctctcctctcctctgcttggttccctcttgatctatcc
gcccatcagtctgctcttctactggctggaaacctacttgcagctattgcaccaaagtgc
atgaagagtccatgggcaggtgaggaggagtctaacaccgccccctctaaggtggaggag
ccgtggcctgctcttaacgaccgctctctggttgttatggtggagcagcttttctcgcac
ctgctgaagatcctcaacatctgtgcccatgtgctggatgacacacccccaggccctgca
gtcaaggctactttaccatcattggccaacactccctctctcagtccaatcaggcggaag
ggtaaagagaaggacatgacggagccaagcaacacccccatgagcccaaagaaaggagga
gaaaccaacacaggcagagcagtagacagcaccggaatagcagcagttaacaagtccacc
actatgggcagcttttatcaccttcctccttatctaaagctttatgatgcactgagagct
acacacactaactacaaagtcacattagaccttcacaacaccaatgagaagtttgggggg
ttcctgaggtcagcgcttgatgtcctttcacagctgcttgagttggccaccctgcatgat
attggcaaatctgttgaggagatcctgggttacctcaagtcctgtttctcacgggaacct
actatggccacagtgtgtgttcagcagcttttgaagtcattatttgggaccaatcttgca
tctcagtatgagggggcctcatctcacccatgtcggtcccagggcaaggccatgcggctt
ggctcgaccagcgttagacctggtctctaccattactgcttcatggccccttacactcac
tttacccaggccctcgcagacgccagcctcagaaacatggtgcaagccgaacaagaacag
gacgcctccgggtggtttgatgtcatgcaaaaagtctccagtcaactgaggtcaagtatc
accaatgtcactcgccatcgaggagacaagaatgccattcataatcacatccgtttgttt
gagccgctggtgattaaagctctgaagcagtacaccaccagcacctcagtgggcctgcaa
agacaggtgctggacctactgtcccaacttgtgcagctccgggtcaactactgtttgctt
gattcagaccaggtgttcattggtttcgttctgaagcagtttgagtatattgaagtgggg
cagttcaaggactctgaagagattgtgcccaacattttcttcttcctggttctgctgtcc
tatgagcgctaccactccaaacagatcatcagcatcccaaagatcattcagctgtgtgac
ggcatcatggccagtggcaggaaggcagtaacacatgcaatccctgcactgcagcccata
gtgcacgacctctttgtgctgagaggctccaataaagcagatgcaggaaaagagttggaa
actcaaaaggaagtagtggtgtccatgctgctacgcctcgtacaacaccatcaggtgctg
gagatgtttattctgatcctacagcagtgccataaagagaatgaagataaatggaagagg
ctttctagacagatcgctgacatcatcctgccaatgatcggcaaacaacaaatgcacctg
gactcccatgaggcattgggcgtgttaaacacactgtttgagacagtggctccctcctct
ctacggcctgtagacatgctgctgaagagcatgttcatcacaccatctaccctagcatca
gtgggtacggggcagttgtgggtgtctgggattctcgccatcctgcgtgttctaatctcg
cagtccacagaggacatcattctgtctcgtattcaggagctttcactgtccccatacctc
ctctcctgtcccaccatccgtcgattgtgtgacgatgactgctcccctcctcaagctcca
cctgataccatggaagactccaatgaagagccgcagcgttttcctcctgaggaaacattt
gctaggttcttattgcagttggtgggggtgttgctggatgatatcgccacgaagcaggtg
aaagttgacatgagcgagcagcagcacacgttctactgtcagcagctgggcacactgctc
atgtgtttgatccacattttcaaatcaggaatgttccggcggatcacggcagcgggcagc
aggctgctgaaggcggagggaggggaagggggtcatttttataccctggagggtctgaac
agcctggtgctccagctcatcaccacacacccatctctggtcctgctctggtgtcaggtc
cttctcatcatcaactacaccaactacacctggtggtccgaggtgcatcagactcccaag
aggaacagtctatccagcactaagctgctgagcccgcactcatctggagaggaggagagg
ccagaggggaagcttgctgtgtgtaacagagagattgtccgacgaggagcccttatcctc
ttctgtgactatgtgtgtcagaacctgcatgactctgagcatctgacgtggctgacggtg
aatcatgtgagcgatctgatcagtctttcccatgagcctccagtgcaggatctcatcagt
gctgtgcaccgaaattcggcagccagcggactcttcatacaggccatacaatcacgctgc
gacaacctttctactccggtgatgcttaagaagaccctgcagtgtctggagggcattcat
ctaagtcagtccggggctctgctcatgctatacgtagacaaacttctcaacacgccgttc
cgtgtgctggctcgcatggtggacacactcgcctgcagacgtgtagagatgctccttgcc
gaaaccctgcagaatagtatcgctcagctaccactggaggagctggacaggattcagcag
tacctacagaccagtggccttgctcaaaggcatcagcggttcttctccctgctggacagg
ttcagagccacagttgctgaagataccacaagccctgttgccccaattaccacacaccca
ctggatggggacccaccccctccccctgaaaatgtggaacccaataaggaatggtatgtt
gctctggtgaaatctcagtgttgtttgagaggtgaaggatctctgtatgaaactactgag
ctgctgacaaaacttccccaatctgacctaaacacaatcatggcctgcaaggacttcaac
ctgtgtctgcttgcatcatgtctgagcattggggcacagagggtatgtaaggatcatggg
gtggttttatttgacactgctaaagaggtggcctttgagagattggttggtgtcgtagag
ctcctcccctcgcctcatcaacccctccttccctccgctaagacgtgcgcggactacatg
cagaagcttaatcaaatatacggtgagcctgggttttatcagacagtgttgagtctgtgt
ggcgtgttgagtcagtacctgctgtctctgtccaaattgccgtcctcactacacattccc
aaagacagagagacactcattgccaccttcagcaccctcgctatagaggtgatggtttgg
cgtttgctgcaggatcagctgcctctgagtgtggacatgcagatgagtctgtcatgtctg
tgtctggctctccagcagccggcggtgtggacacatttcgcctctcactcctacctcaca
cacacctgctcaatcatccaatgtatacagctcctcatccatgcagtttctgttggtcct
ggtgaccaacttctgaggcctgagcggaaaacatcaaacacagagcagtcagaagaccag
ttggactctgcagacaaccagcgtgaatggcggtgttgtgagatcatggctgagctggtt
gaaggtctacagagtgtgttggctctgggtcaccatagaaacaagaacttcccagcattc
cttacgcccaccctacagaacgtcatcatcagcctggccaggcttccccttgtgaacagc
tatacccgaatcccaccactggtctggaagctgggctggtcccccaggccgagtggagat
ttcggcacagcattgccagagatccctgtggagttcctgcaggagaaagatgtcttcaga
gagttcctctaccgcattaacactctgggctggagtagtcggacccagtttgaggagacg
tgggccactcttttgggggtgctggtcactcagccaatcacgatggaccaagaggaggaa
acccagcaagaggaggatctggagaggactcagataaatgtactagcggttcaggccatc
acctctctagtgctgagtgccatgactctgcccacagcaggaaatccagccattagctgc
cttgaacagcaaccccgcaacaaaatccttaaagctctggacaccaggtttggtcgtaag
ctgagtgtgattagaggtatggttgagcgtgagattcaggccatggtgtcaaagagagac
aacattgccacacacttcccctatcaagcctgggaccctgtgccctctttatcatcttcg
acggcgggcaccctcatcagccatgagaaactcctgctgcagattaacactgagagggag
atgggcaatatggactacaaactgggtcaagtgtccattcactcagtgtggttgggtaat
aacatcacccctctgagggaggaggagtggggtgaggatgaggaagatgagacggatgct
ccagcacctgcctcaccaccattatcaccaatcaactccaggaagcaccgtgcaggggtt
gacatccactcctgctctcagttcctcctggagctctacagccagtggatcctccctgga
agccccagcagcaggaagactcctgttgtgctaatcagtgaggttgtcagatcgctgctg
gcagtgtctgatctgttcactgagaggaatcagtttgatatgatgttctccaccctcact
gagctgcagaaagtccatccaccagaagatgagatcctcagccagtaccttgttccagct
atctgcaaagcagccgcagtgcttggcatggataaagccattgcagagcctgtgtgccgt
ctgttggagagcaccttgcgcagcactcatctgcccagtcggatcggtgctcttcatgga
gttctgtacgtgctggagtgcgatctgctggacgatacagcacggcagcttatccctact
gtcagtgaatacctgctctctaaccttagagctatagcaaactgtgtgaatctacacaac
cagcagcatgtgttggtgatgtgcgccgtggcattctacatgatggagaactacccattg
gatgttgggcctgagttcaatgccgggatcattcagctgtgctgtatgatgctatctggt
agcgaggaggccacgccatccatcatctaccactgcgtcctgcgaggaatggagcggttg
cttctgtccgagcagctgtcgcgcatggacgcggagacgctggtcaagctgagcgttgac
cgcgtgaacatgcccagcccacaccgtgccatggctgccctgggtctcatgctcacctgc
atgtacacaggtgtggctggagaggaagggaaggagaagggaagtcctgggcgccctgct
gatgctgacccaacagctcctgacagcgagtcagtcattgtcgcaatggagcgtgtatct
gttctgtttgaccggattcgtaaaggctttccgagtgaggcacgagtggtagcccggatc
cttcctcagttcctggatgactttttcccactgcaagacgtcatgaacaaagtcatcggg
gagttcctgtccaatcagcagccttatccacaattcatggctacggtggtgtacaaggta
tttcaaacacttcatgcaactgggcagtcctccatggtccgtgattgggtgctactctcg
ctgtcgaactttacacagagaacacctgtcgccatggcaatgtggagcctgtcctgtttc
tttgtcagtgcctcgaccagccagtggatctctgccctcctccctcatgtcatcagtcgc
atggggaagtctgacacagtggacatcagcctcttttgtctggttgcaatggatttctac
cgacaccagattgatgaggagttggatcgcagggccttccagtctgtctttgagatggtg
gcttcacctggcagtccgtattaccaactactgtgctgtttgcagagcattcaccaagac
acgacactataa
DBGET
integrated database retrieval system
