KEGG   Pimephales promelas (fathead minnow): 120492185
Entry
120492185         CDS       T08155                                 
Name
(RefSeq) splicing factor U2AF 65 kDa subunit-like
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
pprm  Pimephales promelas (fathead minnow)
Pathway
pprm03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pprm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    120492185
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pprm03041]
    120492185
Spliceosome [BR:pprm03041]
 Complex A
  U2 snRNP components
   U2 related factors
    120492185
 Complex B
    120492185
SSDB
Motif
Pfam: RRM_1 RRM_occluded RRM_7
Other DBs
NCBI-GeneID: 120492185
NCBI-ProteinID: XP_039546279
LinkDB
Position
Unknown
AA seq 468 aa
MSDFEEFEKQLSENRQERERERHKRRSRSRSLGRSKKRCSWSKDRSSRSRGKRSRSRSRD
RKSRDHRSCSRDQKKHSYSPRRTRKKKMCKYWDVPPSGFEHITPMQYKAMQAAGQIPSIA
LLATPTNACLAAAPTQVPAVGSQMTRQARRLYVGNIPFGITEESMAEFFNTQMRLAGLSQ
APSNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYRPLPGISE
QPAFHVPGVVSTVVPDSPHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATSLSK
GYAFCEYVDISATDQAVAGLHGMQLGDKKLIVQRASVGAKNANPTAVVETPVTLQVPGLQ
RMQNSGRPTEVLCLLNMVMPEELLDDEDYEEILEDIREECCKYGTVRSIEIPRPVDGVEV
PGCGKIFVEYVSAAECQKAMQALTGRKFANRVVVTKYYDPDMYHRHEF
NT seq 1407 nt   +upstreamnt  +downstreamnt
atgtctgatttcgaggagttcgagaaacagctgagcgagaatcggcaagagagagagagg
gagaggcataagaggaggagtcgcagtcggtctcttggtcgcagcaagaaacggtgcagc
tggagcaaagacagaagcagtcgcagccgagggaagcgcagtcgcagtcgcagtcgagac
aggaagagccgggaccaccggagctgctcacgcgatcagaagaaacacagctattctcca
cgtagaacaaggaagaaaaagatgtgcaagtattgggacgttcccccttcaggctttgag
cacatcactccaatgcagtacaaagccatgcaagctgctgggcagatccccagcattgcc
ctgctggctacacccactaatgcttgtttggcagccgcacccacacaagtgcccgccgtt
ggcagccagatgaccaggcaagcacgacgcctgtatgttggcaacatcccgtttggcatc
actgaggagtccatggctgaattcttcaatacccagatgagacttgcaggactgtctcaa
gctcccagcaaccctgtgctcgcagtgcagatcaaccaggacaagaactttgctttctta
gagtttcgatcagtggatgaaaccactcaggccatggcatttgatggcattatctttcaa
ggacagtcgctgaagatcagacgtccacatgactaccgccctcttcctgggatctctgag
cagcccgcttttcatgttccaggtgttgtttccacagttgtaccggactcccctcataaa
ctcttcattggaggtctaccaaattatctcaatgatgatcaggttaaagagctcctgaca
tcctttggtcctctcaaagccttcaaccttgtgaaagacagtgccacatcactgtccaaa
ggctatgctttctgtgaatatgtggatatcagcgcgactgaccaggcagtagctggatta
catggcatgcagctcggtgataaaaagctcatcgtccagagggcaagtgtgggcgccaag
aatgccaatcctactgctgttgtagagacgccagtgacgctccaggtcccgggactgcag
cgcatgcagaactctggccggcccaccgaggtgttgtgtctgctgaacatggtcatgccg
gaggagctgctggacgacgaggactatgaggagatcctggaggacatccgtgaggagtgc
tgcaagtacggcactgtgcgctctatcgagatccccaggccggtggatggtgtggaggtg
ccaggctgtgggaagattttcgtggagtacgtgtctgctgctgaatgccagaaggccatg
caagcactgacggggcgcaagtttgctaaccgcgtggtggtcaccaaatactacgatcca
gacatgtatcacagacacgagttctga

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