KEGG   Pimephales promelas (fathead minnow): 120492276
Entry
120492276         CDS       T08155                                 
Name
(RefSeq) ras-related protein Rab-33B
  KO
K07920  Ras-related protein Rab-33B
Organism
pprm  Pimephales promelas (fathead minnow)
Pathway
pprm04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:pprm00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    120492276
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pprm04131]
    120492276
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pprm04147]
    120492276
   04031 GTP-binding proteins [BR:pprm04031]
    120492276
Membrane trafficking [BR:pprm04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Rab GTPases
    120492276
 Others
  Specific organelles associated proteins
   Auto phagosome
    120492276
Exosome [BR:pprm04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   120492276
GTP-binding proteins [BR:pprm04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab33
    120492276
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU SRPRB Gtr1_RagA MMR_HSR1 PduV-EutP G-alpha ATP_bind_1 AAA_22 NACHT IcmF-related_N AAA_16 AAA_7
Other DBs
NCBI-GeneID: 120492276
NCBI-ProteinID: XP_039546417
LinkDB
Position
Unknown
AA seq 229 aa
MDSSLESSSSSNGVPVRCRRTCKIIVIGDAGVGKTCLTHRFCTGQFPSRTEATIGVDFRE
KLLDVEGEKVKVQLWDTAGQERFRKSMVQHYYRNVHGIVFVFDVTNHISFRNLPLWMDEC
RQHSLGPDIPRALVCNKADLVTPITSVVVEQARHLAEVHGMSFYLTSAKGHKGDQVESIF
VTLAKSLKSQRSQSVNECVLRCRSESFKTPAKVTIAQEDTKKKWGCICN
NT seq 690 nt   +upstreamnt  +downstreamnt
atggattcttccttggagagctccagctcgtcgaacggtgtcccggtgcgttgccgtcgt
acttgtaagatcattgtgatcggagatgccggagtcggtaagacctgtttgacacaccgc
ttctgcaccggacagtttcccagcagaacggaggcgacaatcggggtggactttcgtgag
aaacttcttgatgtagaaggcgagaaagtcaaagtacagctgtgggacactgctggtcag
gaacgttttcgtaaaagcatggtgcagcactactatcgcaatgtgcacgggatcgtcttc
gtgtttgatgtcactaaccacattagtttccgcaatctgcctctgtggatggacgagtgc
cgtcagcactctcttggtccagatattccccgggcccttgtttgcaacaaggccgatctg
gtcactccgattacatctgtggtagtcgagcaggctcgtcatttggccgaagtccacgga
atgtctttttatcttacttcagccaaaggtcacaaaggggaccaggtggagagcatcttt
gtgacattggcaaagagtctgaagagccagagaagccagagtgtgaacgaatgtgtgcta
aggtgcagatctgagagcttcaaaaccccagcaaaagtcacaatagcacaggaggacacc
aagaagaaatggggctgcatctgcaactga

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