Pimephales promelas (fathead minnow): 120492318
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Entry
120492318 CDS
T08155
Symbol
nvl
Name
(RefSeq) nuclear valosin-containing protein-like
KO
K14571
ribosome biogenesis ATPase
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
120492318 (nvl)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pprm03009
]
120492318 (nvl)
Ribosome biogenesis [BR:
pprm03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
120492318 (nvl)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Nucleolin_bd
RuvB_N
AAA_16
AAA_22
AAA_5
AAA_14
AAA_2
AAA_33
TIP49
NPHP3_N
AAA_28
Mg_chelatase
RNA_helicase
AAA_18
nSTAND3
Rad17
Viral_helicase1
AAA_17
IstB_IS21
ABC_tran
TsaE
Vps4_C
AAA_3
Zeta_toxin
NACHT
nSTAND_NTPase5
Sigma54_activ_2
Motif
Other DBs
NCBI-GeneID:
120492318
NCBI-ProteinID:
XP_039546479
LinkDB
All DBs
Position
Unknown
AA seq
785 aa
AA seq
DB search
MRNRGAYNIDPRLKHRVHQFLKTHDDHYVDISAMASELQQQFRTEYGRRNRTAFRIQVEK
VYAVICSESDICVLENTHLAKRARRSGEDGDASEGSTDSEDEVPEHEHTNLMNSSLTSLY
QSGASGSTPQRGEGWILDRTGEPQDNICIDLCEDEATSTATQRNPGKTRRTKSGKMKRMK
KNKHEEDEEISDAILQKKRKITAHELQHSPVKFEDFGGSDETLQDVCKLLIHMRHPEVYQ
RLGVVPPRGFLLHGPPGCGKTLLAQAVAGETGLPMLKVSAPELVSGVSGESEQKMRELFE
QAISSAPCILFIDEIDAITPKREIASKDMERRIVAQLLTCLDDLNSLSEPAQVLVIGATN
RPDSLDPALRRAGRFDREICLGIPDEGARLKILRTLCRKIRLPEDFDYRQLARLTPGYVG
ADLMALCREAAMTTVNRILLTSRSEDDTPPKCELEQLLSLLKTNESLSEEQLSGLCVLMS
DFKSSLASVQPSAKREGFATVPDVTWEDVGALHDIREELNMAIMAPINNPEYFRALGLSA
PAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRARNSA
PCVIFFDEIDALCPRRSEHESGASVRVVNQLLTEMDGMENRRQVFMMAATNRPDIIDPAV
LRPGRLDKTLYVGLPPAADRHAILLTITKGGTKPHLDPDVNLEEIAHDARCESFTGADLS
ALVREASVNALRVHLNTGPAQTHTEPVKDIRVSRVHFEDAFKKVRPSVSKKEQLMYEKLK
DTLTR
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaccgcggcgcttataatatagacccgagactcaaacatcgagtccatcagttc
ctgaagacacatgatgatcattatgtggatatttcagccatggcctctgagcttcagcaa
cagttcaggacggagtacgggcgcaggaacaggaccgccttcaggattcaagtggaaaaa
gtgtatgcagtgatatgcagcgagtctgacatctgtgtcctggagaacacacacctggcc
aagcgagcgcggcgcagcggagaggacggggacgccagcgagggcagcaccgacagcgag
gacgaggtccccgaacacgagcacacgaacctgatgaacagctctctgacgtccctgtac
cagagcggcgcgagtggctcgacgcctcagaggggcgagggctggatcctggaccgcacg
ggggaaccacaggacaacatctgcatcgacctgtgtgaggacgaggccaccagcaccgcg
acgcagaggaaccctgggaagacacgcagaacgaagagcggaaagatgaagaggatgaag
aagaacaagcacgaggaggacgaggagatcagtgacgcgatcctgcagaagaagaggaag
atcacggcccacgagctgcagcactctcctgtcaagtttgaggacttcggaggcagtgat
gaaactctgcaggatgtgtgtaagctgctgatccacatgaggcatccggaagtgtaccag
cgtctcggagtcgttcctccgcggggattcctcctgcacgggccgccggggtgcgggaaa
acactgctcgctcaagctgtggccggagagacgggtttgcccatgctgaaggtctctgcg
ccggagctggtgtctggagtctctggagagtctgagcagaagatgcgggaactgttcgag
caggccataagcagcgctccctgtatcctgttcatcgacgagatcgacgccatcactccc
aaacgagagatcgcctccaaagacatggagcgaaggattgttgctcagcttctcacctgc
ttggacgacctcaattcgttatcggagccggctcaggtgttggtgatcggagccacgaac
cggccggactcgctggacccggccctgcgccgagccggcaggttcgaccgggagatctgt
ctggggattcctgacgagggcgcgcgactgaagattctgcggacgctctgccgtaagatc
aggctgccggaggacttcgactacagacagctggcacgactcacgccaggttacgtgggc
gcagatttgatggcgctgtgtcgcgaggcggccatgaccaccgtcaaccgaatcctgctg
acatcccgcagtgaagacgacactccaccgaaatgtgagctggagcagctgttgtctttg
ctgaagaccaacgagtctctgagcgaggagcagctctctggactctgtgtcctcatgtcg
gacttcaagtcgtcgttagccagtgtccagccgtccgcgaagcgcgagggtttcgccacc
gtgccggacgtgacctgggaagatgtgggcgccctgcacgacatccgcgaggagctcaac
atggccatcatggctcccatcaataacccggagtatttccgagctctgggtctgagtgcg
ccggctggagtgctgctcgccggaccgcccggctgcgggaagaccctcttagccaaagcg
gtcgctaacgagtccggcttgaacttcatctccgtcaagggtccagagctgctgaacatg
tacgtgggagagagcgagcgagcggttcgtcaggtcttccagagagcccgtaactcggcg
ccgtgtgtgatcttctttgatgagatcgatgcgctgtgtcctcgtcgctcagagcatgag
tccggagccagtgttcgtgtggtgaaccagttgctcaccgagatggacggcatggagaac
cgccgacaggttttcatgatggccgccaccaacagaccagatatcattgacccggcggtg
ctgagacctggacggctggataaaaccctgtatgtgggtttgccgccagccgcggacaga
cacgccatattactcaccatcactaagggaggcaccaaaccacatctagatccagatgtc
aatcttgaggaaattgcccatgatgcacgttgtgagagttttacaggtgcagatctgtcg
gcgctggtgcgagaggcgagtgttaacgctctgagagttcacctgaacactggaccagct
caaacacacacagagccagtgaaggacatcagagtgagtcgagttcacttcgaagacgcc
ttcaagaaagtgcggccgtccgtgtccaagaaggagcagttaatgtatgagaagctgaag
gacactctcacgagatga
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