Pimephales promelas (fathead minnow): 120492319
Help
Entry
120492319 CDS
T08155
Symbol
rreb1a
Name
(RefSeq) ras-responsive element-binding protein 1 isoform X1
KO
K20210
ras-responsive element-binding protein 1
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprm03000
]
120492319 (rreb1a)
Transcription factors [BR:
pprm03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
120492319 (rreb1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-H2C2_2
zf-H2C2_5
zf-met
zf-C2H2_jaz
zf-C2H2_6
zf-Di19
zf-C2H2_8
DUF629
zf-C2H2_REST
Zn_SUZ12
Motif
Other DBs
NCBI-GeneID:
120492319
NCBI-ProteinID:
XP_039546480
LinkDB
All DBs
Position
Unknown
AA seq
1703 aa
AA seq
DB search
MSRRKQPNPNKVKLMENSKEETRTESAICTQTAEKVEPSNDVQSPAPTETHTEGSASVEE
EGSEWENGQNRADGEMHIADGVDLSPINSMMSTVMKAAHLPHHVVDSAHTTPNKVPVKSP
STNRSGRKIQEAKDDSGLLVCPLCDKGFQTQHQLTMHIRQHNTDSGNADHSCSICGKSLS
SASSLDRHMLVHSGERPYKCSVCHQTFTTNGNMHRHMKIHEKDSAGSIPSSPTLSPPKRR
RPSATKRKLNPDEDREKTEEPANKKTCVVQVLEDSGADEQSLNKGQEEVLACPICFKNLT
CRNDFDTHMETHPDTTLRCDLCCISFRTHRSLLRHNAATHKQLPTDPNGRPFIQNNPSIP
LGFNDLAFIDFSCQKFPRIAQIWCETNLRRCTGKFHRFVCDACDKAFPLSSALDLHKASH
ETSSGTQETTSTLIMKDELPTPEKNGFMDSLGLQHISQIKPAPSEEDIQQAKLESIRVIH
VDPNQSTVPQETGLVGGGNLSLVDPASLQGLSHQEALKLLSLQPFQTGFLVQPDGGMVLK
PVCGESGMELADIQQILKVASTAPNQISLPPLSKAPCSGVQSGYKQMPPLKPKPLVAPRT
SMVASTPPPLLNTQQASLGCISPSLPPPASHPLKTARDLSSSSSPSSANNQASAERIQME
ADCMGDAHTPMDMDERHIKQENGKLDETTVKKGGAQKGSYPCRFCDQVFAFSSALQAHMR
YHLGILPHQCNICDYVAPDKATLIRHLRTHSGERPYVCRICHYPFTVKANCERHLRKKHM
KNNRREIEKNIKYVTSSTSTADVLEQAGTSETTCRFCGEDLKTFRALQIHLRTHNGCQRK
PFECKRCGAAFLAKRNCIHHLLKQHPEVQEQDIEEHIITLLAASTQNSPNPSPLNGVSPS
TVGKPIKVEDLNFYGVDMDQPLDFSNKSRGGSSVGSVSGSPGIKMEPVSYDSSMEPIDLS
IPKNPLKKLKQDIEAAFPREIKKELSTISILAQALQTDKSIDEKPQPLGCYQVPVALTSL
TGSANPAGRSLRLKPLLPKPSSAAEKELPPLASIAQIISSVSGAPDLLKRDNTNGLQADS
ETHGKQESTDTLIEELSVESSKKRSRKRASRSIAKEKTGINATDLSIDLESSGEFASVER
MLANTDANKFSAYLQTNTIELARKDGQQPGACDEKEVKDEKHLPVWQTTQPHQSKGKKNA
YSNSVQKMTCPFCPRVFPWASSLQRHMLTHTGQKPYPCPQCDAFFSTKSNCERHLLRKHG
VSNRVLRRNGGIPKCKDAEEGSQESAESTSETDLPVSEAMDLTRSDPEKPEVMDAEKPSP
AKPTEATVVEPIPHQEEDPTALESSKRSDSENEDGDSHSNKTLDLTFVSKPKDFTISEKD
QPQSSPAADGDMSDKTPQDESKFTCKSCKKSFRYAATLTRHEKVHQQDEASDSANGPAQS
LTKSADPIVPCENKKEVTEEEVEGLKKTTSENEGTGSVVESGSEEDKEERSDEEEAATEP
KSAERESEELGSKPDKRKKVCNICNKRFWSLQDLTRHMRSHTGERPYKCQTCERTFTLKH
SLVRHQRIHQKLRGVDSDGSTCGAAGGPDEEGFSGRSASEGECTPTSTNPPSENESEITD
TVKGEPTSMDKEDRVPAVETEELKLTSETGPETPKEPSAEEQASDSSDVEPSGGFIQGLL
EIHTNPTTEHMLPTSEPPLLGVK
NT seq
5112 nt
NT seq
+upstream
nt +downstream
nt
atgtctcggcgaaagcaacccaaccccaacaaagtcaaacttatggaaaattcaaaggag
gagacgagaacagaatccgctatttgcacccaaactgcagagaaggtggagccaagcaat
gatgtccagagccccgcccccacagaaacacacacagagggttctgccagtgtagaggag
gaaggaagtgaatgggagaatggacagaatagagcagatggagagatgcatatagccgat
ggagtggacttgtctcccattaactccatgatgagcactgtgatgaaagcagctcatctt
cctcatcacgtagtagactccgcccacaccacacccaataaggtgccagtcaaaagcccc
agcaccaaccgcagtggaagaaagatccaggaagccaaagatgacagcgggttacttgtc
tgtccgctgtgtgacaaaggctttcagacccaacaccagctcaccatgcacatccgccag
cacaacacggacagtgggaatgcggaccactcttgcagcatctgcggcaagtctctgagc
tcggctagctctctggatcggcacatgctagtgcacagcggagagagaccctacaaatgt
agcgtgtgccatcagactttcaccaccaatggcaacatgcacagacacatgaagatccac
gagaaggactctgccggctccatccccagcagtccgactctgtctccacctaagcggcga
cgtccctctgcaaccaaacgcaaactaaacccagatgaagaccgagagaagaccgaggag
ccggccaacaaaaagacctgtgttgtgcaggtcctggaggatagtggggcagatgagcag
agtttgaacaaaggacaggaggaagtcttggcctgtcctatctgcttcaagaacctcaca
tgcagaaacgactttgacacccacatggagacccatcccgacactacactgagatgtgat
ttatgctgcatttcattccggacacaccgaagtttgcttcgccacaatgcagcaacccat
aagcagctacccaccgaccccaatggacgaccctttattcagaataacccatccatccct
cttggctttaatgatctggctttcattgacttttcatgccagaagttccctcgtattgcc
cagatttggtgtgaaacaaacctccgccgatgcactggcaaattccatcgttttgtatgt
gacgcatgtgataaggcattccctcttagctcagctctggacttgcacaaagcctcacat
gagacttcaagtggcacccaagagaccacttcaaccttaattatgaaagatgagcttccc
actcctgagaaaaatggcttcatggactccctgggcttgcagcacatctctcagatcaag
cctgccccctcagaagaggatatccagcaggccaagctagaaagcatccgggttatccat
gtagatccgaatcagtccaccgtacctcaagagactggccttgttggtgggggtaacctg
tctcttgtagacccagcgtctcttcagggactgtcccatcaagaagctctcaaactgctg
tcccttcagcctttccagacaggttttctggtgcagccagatggtggtatggtgttgaag
cctgtgtgtggtgaatccggcatggaactcgctgatatacagcaaatactcaaagtagct
tcaacagctcccaaccaaatttcgctcccacccttatccaaggcaccctgtagtggcgtg
cagtcgggctacaagcagatgcctcctctcaagccaaagcccttggtggctcccagaacc
agtatggtagcttcaactccaccacctctattaaacacccagcaagcttcactgggctgc
atcagccctagcctcccaccccctgccagccatcctctcaagactgcaagggatctctcc
tcatcttcctctccctcttctgccaacaaccaggcttcggcagagaggatacaaatggag
gcagattgcatgggagatgcccataccccaatggacatggatgaaagacatatcaagcag
gagaatggcaagttagatgagaccactgtaaagaagggaggagctcaaaaaggctcatac
ccctgccgattttgtgaccaggtctttgcgttctctagtgcgctgcaggcacacatgcga
tatcatttgggcatcctaccccaccaatgcaatatctgtgactatgttgctccagacaag
gccacattgatccgtcatttgagaacgcacagtggtgagcggccctatgtctgccggatc
tgtcattacccatttacggtcaaggccaactgtgagcggcatcttcgcaaaaagcacatg
aaaaacaatcgcagggagattgagaaaaacatcaagtatgttacctcgtccacgtccaca
gctgatgtactggagcaggctgggactagtgaaactacgtgccgcttctgtggggaggac
ctcaagaccttccgggccctgcagattcacttgcgaacgcataacggctgccagcgaaag
ccatttgagtgcaagcgttgtggggcagccttccttgccaagcgtaactgcatccatcac
cttctcaaacaacatccagaggtccaagagcaggatattgaagagcacataatcactctt
ctagctgcctcaacccaaaatagcccaaacccatctcctctcaatggggtatctcctagc
actgtggggaagcccatcaaggtggaagacctcaacttctacggcgtggatatggatcaa
cctctggacttctctaacaaaagtcgcgggggaagcagtgtcggaagtgtgagtggatca
cccgggatcaaaatggagcccgtctcctacgactcttccatggaacccattgacctctct
attcctaagaatcctctgaaaaagcttaaacaagacattgaggctgcattcccaagagag
attaagaaagaactttcaaccattagcatccttgctcaggctcttcagactgataagtcc
attgatgagaaaccccaaccgcttggatgctaccaggtccccgtagccttgacctccctt
accggtagcgcaaatcccgcaggaagatccttgcgtctaaagcccctgcttcctaaacct
tcctctgctgctgagaaggagcttccaccactggcatccattgctcagatcatttcctct
gtttctggtgcccctgaccttctaaaacgtgacaacactaatggccttcaggctgattct
gagactcatggcaagcaagagtcaacagataccttgatagaggagctctctgtagagagc
tccaagaagaggtccaggaaaagagcttccagaagcatagcgaaagagaaaactgggata
aatgccacagacctgagtattgatttggagtctagtggggagtttgcaagtgttgagaga
atgttggcgaacactgatgccaacaagttcagtgcctatcttcagaccaacacgattgag
ttggcaagaaaagatgggcagcagcctggtgcttgtgacgagaaagaggtgaaagatgag
aaacacttgccagtctggcagactactcaaccccatcagtccaaagggaagaagaatgca
tactcaaactctgtgcaaaagatgacttgccctttttgtcccagggttttcccttgggcc
agttcgcttcagcgccacatgttaacacacacaggtcagaagccatatccttgtccccaa
tgtgatgccttcttctcgaccaagtccaactgtgagcgacatcttttacgcaaacatggc
gtttccaaccgagtgcttaggcgcaatggtggaatacccaagtgtaaagacgccgaggaa
ggttcacaagagagtgcagagagcacatctgaaacagaccttcctgtgagtgaggcaatg
gatctcacaagatcagaccctgagaagcctgaagtaatggacgctgaaaaaccctcacca
gctaagccgacagaagcaaccgttgtagagcctattcctcaccaagaggaggacccgaca
gctctcgagtcatcgaagcgcagcgactcagaaaatgaggatggtgattcccacagcaat
aagacccttgacttgacgtttgtctccaagccaaaggactttacgatctctgagaaagac
cagccacagtcctcccctgcagcagatggtgacatgtctgataaaactcctcaagatgag
tccaaattcacctgcaaaagttgcaagaagagtttccgctacgctgccaccctgaccaga
catgagaaagttcatcagcaggatgaagcgtcagactcggctaatggacctgcgcaaagc
cttacaaaatcggccgatccaatcgtgccttgtgaaaataagaaagaggttacagaagaa
gaggtggaaggtttaaagaagaccacatctgagaacgagggaacgggcagtgtggtggag
agtggatcggaggaagataaggaggagaggagtgatgaagaggaagctgcaactgaacca
aagagtgccgagcgagaaagcgaagaactcggcagcaagccagacaagaggaaaaaggtg
tgcaatatatgcaacaaacgtttctggagccttcaggatctcaccagacacatgcgctct
cacacaggtgagaggccttacaagtgtcagacatgcgagcgcaccttcaccctcaagcac
agtttggtccgacatcagcgtatccaccagaagctacgtggagtggatagtgatggttcg
acctgtggggccgcaggtggacccgacgaggagggcttcagcgggcgatcggctagcgaa
ggcgagtgcacacccaccagcaccaatccaccctccgagaacgaaagtgaaataacagac
actgttaagggggaaccaacctcgatggataaagaggaccgtgtacccgctgtggaaact
gaagagttgaaactaacttccgagacgggaccagaaacgcccaaagaaccttcagcagag
gaacaagcatccgattcatctgacgtggagccgtcgggggggttcatccaaggtttactg
gagatccacaccaatcccactactgagcacatgttgcccacctctgaaccgccactgctt
ggggtgaagtga
DBGET
integrated database retrieval system
