Pimephales promelas (fathead minnow): 120492327
Help
Entry
120492327 CDS
T08155
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
pprm04054
]
120492327
Pattern recognition receptors [BR:
pprm04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
120492327
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
NLRC4_HD2
FISNA
PRY
NOD2_WH
LRR_6
SPRY
LRR_4
Motif
Other DBs
NCBI-GeneID:
120492327
NCBI-ProteinID:
XP_039546497
LinkDB
All DBs
Position
Unknown
AA seq
1068 aa
AA seq
DB search
MSHPVFLFHWKLQLILSSAACKMSLYEKRGEEEEEDEDVNTHKSASPEPSCVSIKSDVSM
DPPPKFSDGAVTSDPEVMRDDVIRSVTCTDSDCQAFIRQIVREQHKASMKNKYERLFEGT
KLQENQTLLNRIYTQLYIIEGESEGVNEEHEVLQMEKTARTQDITIFCNDIFNPLHQPGY
WEKDKIKTVLTKGIAGIGKTVSVQKFILDWAEGKANQDVDFMFVLPFRELNLIKDHHYSL
HRLLLDFHPELQDLDSKIYEECKVVVIFDGLDESSMTLMFTDDKKVCDVNESSSVGVLMS
NLIRGELLPSALIWITSRPAAANQIPSKYINRLTEIQGFNEPQKEEYFRKRICDKLQVSR
IISHIRRSRSLRIMCHIPVFCWISATVLQNILKQDDSAEIPQTLTEMYIHFLLTQINTRN
QKYDERNPEKLLKSNRDVIVKLAELAFKQLMKGNVIFYEEDLTESGIDVIDASVYSGICT
EIFKEESVIHQRKVYCFIHLTFQEFLAALYLFYCHFFKNKKSLQSFLNKRYHRYSRINSL
YELLKAAVSESLQSANGHLDIFLRFLLGISLESNQRLLKDLLTHTVNKSETIMKITHYIK
NKIKDDDDCLSADRSINMFLCLLEMKDQTLYREIQQFLKSENHSVNRLSPSQCSTLAYIL
QISEEVLDEFDLKKYNTSDEGRRRLIPAVLNFRKALFADCNLTDQCCESLSSSLQSSNSL
RELDLSHNYLQDSGVKLLSNGLKSVHSHCRLNILRLAECYLTDQCCESLSSYLQSSNSSL
RELDLSNNDLQDSGVKLLSDGLKSSHCQLNILRLSGCMVTEEGCCFLASSLSSNPSHLRE
LDLSYNHPGQSLVKLLSDPNNRLDKLNVDHGGEFTITTGQQKYACDLTLDLNTVNTHLAL
SERNRTVTHVEKKQSYPDHPERFNKCYQVLCREGLSGRCYWEAEWSGREVYVSVTYKEIN
RKGLSNDCVFGYNEKSWSMNCFYDGFTVKHNDKITVISVPSRRSNRVGVYLNWPAGTLSF
FSVSDTHTLTHLHSFNSTFTEPLYAGFGVYSGSSVSLCEIKQLSVRNN
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaccctgtcttcctgtttcattggaaattacagctcattctaagtagtgccgcc
tgtaaaatgagtctctatgagaagaggggggaggaggaggaggaggacgaagatgttaac
acacacaaatcagcatctccagaacccagctgtgtgtctattaagagtgacgtatccatg
gatcctccccctaaattcagtgatggagcagtgacttctgaccctgaagtaatgagagat
gatgtgatcagatcagtgacctgcactgactctgactgtcaggccttcatcaggcagata
gtcagagaacaacacaaagccagcatgaagaacaaatatgagagattatttgagggaaca
aaactacaagagaatcaaaccctcctgaacaggatctacacacagctctacatcattgaa
ggggagagtgaaggggtgaatgaagaacatgaggtattacagatggagaaaacagctaga
acacaagacattacaatcttctgcaatgacatctttaaccccttacatcaaccaggatat
tgggagaaagacaaaatcaagactgttcttactaaaggcatcgctggaattggaaaaact
gtctctgtgcagaaattcattctggactgggctgagggaaaagccaatcaagatgtagat
tttatgtttgtgcttccatttcgagagttgaacttgattaaagatcaccactacagtctt
cacagacttctgctggacttccatcctgaacttcaagatctagactcaaagatttatgaa
gagtgtaaagttgtagttatctttgatggtctggatgaaagcagcatgacactgatgttc
acagatgataagaaagtttgtgatgtgaatgagtcttcatctgtgggtgtgttgatgtca
aacctcatcagaggagagctgcttccctctgctctcatctggatcacctccagaccagca
gcagccaatcagatcccctcaaaatacattaaccgtctgacagaaattcagggattcaat
gagcctcagaaggaggaatatttcaggaagagaatttgtgacaagcttcaagtcagcaga
atcatctcacatattagaagatcaagaagccttcgcatcatgtgtcacatacccgtcttc
tgctggatctcagccactgtgcttcaaaacatcctgaaacaagatgacagtgcagaaatc
cctcaaactctgactgaaatgtacatccacttcctgctgactcagatcaacacgaggaat
cagaagtacgatgagagaaatccagagaagctcctgaagtccaacagagacgtgattgtg
aagcttgccgagctggcgttcaaacaactaatgaaaggaaatgtgattttctatgaggag
gacctaactgagagtggcatagatgtcattgacgcctcagtgtattctgggatttgcact
gagatctttaaagaggaatctgttattcatcagaggaaagtctactgcttcattcatctg
acctttcaggagtttctagctgctttatatctgttttactgccattttttcaagaataag
aaatcactgcagtcgtttctgaataagagatatcaccgctacagtcggataaactctttg
tatgagttattaaaagcagcagtttctgaatccttacagagtgcaaatggacacctggat
attttcctgcgattcctgctgggcatctcattggagtcaaatcagagactcttaaaggat
cttctcacacacacagtgaacaaatcagagaccatcatgaaaatcacacattacattaaa
aacaaaattaaggatgatgatgattgtctctcagcggacagaagcatcaatatgttcctc
tgtctgctggaaatgaaggatcagactctgtacagagagattcagcagtttctgaagtca
gaaaatcactcagtgaatcgactctctccatctcaatgctccacattagcctacattctt
cagatatcagaggaggtgctggatgagtttgatctgaagaaatacaacacatccgatgag
ggtagaaggagactgataccagctgtgctgaacttcagaaaagctctttttgccgactgt
aatctcactgatcagtgctgtgaaagtttgtcttcatctctacaatcatcgaactcactg
agagagctggacctgagtcacaattacctacaggattcaggagtgaagttgctctctaat
ggactgaagagtgtccattcacactgtcgactcaacatactgagacttgctgagtgttat
ctcactgatcagtgctgtgaaagtctgtcttcatatctacaatcatcaaattcctcactg
agagaactggaccttagtaacaatgacctgcaggattcaggagtgaagctgctctctgat
ggactgaagagttcacattgtcaacttaacatactgagattatctggctgtatggtgaca
gaggaaggctgttgttttctggcttcatctctgagttcaaacccttcacacctgagagag
ctggatctgagctacaatcacccagggcaatcattggtcaagctgctctctgatccaaac
aatagactggacaaactcaatgtggatcatggaggagagttcacaatcacaacaggacaa
cagaaatatgcatgtgatctcacactggatttaaacacagtaaacactcatctcgctctg
tctgagaggaacaggacagttacacatgtagaaaagaagcagtcgtatcctgatcatcca
gagagatttaataagtgttatcaggttctgtgtagagagggtctgtctggacgctgttac
tgggaggctgaatggagcgggagggaggtttatgtatcagtgacatataaagaaatcaac
aggaaaggcttgagtaatgactgtgtgtttggatacaatgaaaagtcctggagtatgaac
tgtttttatgatggtttcactgtcaaacacaatgataagatcacagtaatatctgtccct
tcacgtcgctcgaacagagtaggagtgtatctgaactggccggctggcactctgtccttt
ttcagcgtctctgacacacacacactcacgcacttacacagtttcaacagcacgttcact
gaacccctctatgctggatttggggtttattctggtagttcagtgtctctgtgtgagata
aaacagctttctgtgagaaacaactga
DBGET
integrated database retrieval system
