Pimephales promelas (fathead minnow): 120492651 Help Entry 120492651         CDS       T08155                                  Symbol neo1a Name (RefSeq) LOW QUALITY PROTEIN: neogenin 1a   KO K06766   neogenin Organism pprm  Pimephales promelas (fathead minnow) Pathway pprm04350   TGF-beta signaling pathway pprm04514   Cell adhesion molecules Brite KEGG Orthology (KO) [BR:pprm00001]  09130 Environmental Information Processing   09132 Signal transduction    04350 TGF-beta signaling pathway     120492651 (neo1a)   09133 Signaling molecules and interaction    04514 Cell adhesion molecules     120492651 (neo1a)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04515 Cell adhesion molecules [BR:pprm04515]     120492651 (neo1a) Cell adhesion molecules [BR:pprm04515]  Immunoglobulin superfamily   DCC/UNC5 family    120492651 (neo1a) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Neogenin_C fn3 I-set Ig_3 Ig_2 ig Pur_ac_phosph_N Ig_DSCAM-DSCAML_C V-set Tissue_fac fn3_2 SusE Arylsulfotran_N EphA2_TM Motif Other DBs NCBI-GeneID:  120492651 NCBI-ProteinID:  XP_039546755 LinkDB All DBs Position Unknown AA seq 1422 aa AA seqDB search MAERGARLLLSLFCLTITLSHADKGSALRDFSPFQFSTEPSDTLVVRGAPALLNCSVHAE SPAKIEWKKDGSFLSLASDDRRQVLADGSLLISSVVHSKHNKPDEGVYQCVATIDNLGTI VSRTARLNVAGIPRFLSQPEAASVRVGDSHVMNCEVNPDLVSFIRWEVNKQPLELDQRVF VLASGALVISNSSEADTGPYRCVIENAGPIKTSEEAHLHVLPESGEERTLEFLLEPQPVI KVVGESVLLPCVVTGYPTASVTWMHRDQLIEDSTGRFEVLGGGSLQIFNLTEEDAGVYNC LADNINGSIEAQAELTLRAPPHFLKKPANVYAHEATDVIFECEVTGSPAPTIKWVKNGDA VIPSDYFKIIKEQNLQVLGLVKSDEGFYQCLAENDAGNVQSSAQLIILDQGSRVGAGPKP SGPRDVVASLVSTRFIKLTWRVPAEPHGEDVTYSVYYSLEGTNRERMVNTSRPGEMQVTI QNLMPDSTYAFRVVAHNRNGPGESSAPLRVATQPEVQVPGPAPNLHAVVTSPTTVSLSWD VPLIGNGEILNYKIYHMEKGMDTEQDLDVNTLSYTMTGLKKFTEYSFRVVAYNKHGPGVS TEDLSVRTYSDVPSAPPQNMTVEVLNSKSIMIRWQPPPAEAQNGEIIGYKIRYRKGTRKS EVAEITSGSQLYQLIDGLQRGTEYMLRVAAISVNGTGPATDWVTAETFESDLDETRVPDV PSSLHVRPLVNSIVVSWTPPENQDIVVRGYTIGYGIGSPHAQTIKVDYKQRYYTIENLNP SSHYVITLKAYNNVGEGIPVYESAITRPQSDPIDPDVDLYELFHAPYTPVPEPLPMLPPV GVQASVLGHDNIKVTWADNSLPKNQKITDARYYTVRWKTNIPANTKFKVANTTTLSHTVV GLKPNTLYEFSVMVTKARRTSTWSMTAHGTTFETIPSSAPKDVTVVSKEGRPRTIIVNWQ PPSEANGKITGYIIYYSTDVNAVVHDWVIEPVVGNRLTHQIQELTLDTTYYFKIQARNSK GMGPMSEAVQFRTPKAEPSDKMANDQASGPVKVGRPPSPDQGFGPGGKPDMSGTGDNHIL VIVIIVSVGAFTIIVVVVGAFLCTRRTTTQQKKKRAACKSANGSHKYKGNSKDLKPPDLW IHHERLELKPIDKSPETNPVMTDTPIPRSSKTXHPVDGSMDPMLQRRNSYRGHESEDSMS TLAGRRGMRPKMMMPFDVQPPQPVISAHPIHSLDNHHHHYHLGSLASPTRGYLHHQSSTR SIATPISHLDRAESTESVRNTPSADLLPPSGQPSCTTDLSETDISYHSSVTEEEPAFGTP TAHVRPTHPLKSFAVPAVPAHPMYDSALPSTPLLSQTVKTASIGTLGRTRTPMPVIVPSA PDGSEGIRLHEDAGSNYETDELTEEMAHLEGLMKDLNAITTA NT seq 4269 nt NT seq  +upstreamnt  +downstreamnt atggcggagcggggagcccggctgctcctctctcttttctgcctcacgatcacactttca catgctgacaaaggatcagcattgagggacttcagcccattccagttctccacggagccg tcggatacgctggttgtgcggggagcgccggcgttgctcaactgctcggtccacgccgag tctcctgccaagatcgaatggaagaaagacggctctttcctcagcctggcctcagatgat cgcaggcaggtcctggccgacggttccctgctcatcagctcagtggtccactctaaacac aataaacccgatgaaggggtttaccaatgcgtggccactatagacaacctgggcaccatc gttagccgtacagctagactcaatgtagcaggaataccgcggttcctcagtcagccggaa gcggcgtcggtgcgggtcggggacagtcacgtgatgaactgcgaggtcaaccctgacctg gtgtccttcatccgctgggaagtgaacaagcagccgctggagctggatcagagagtgttt gtgctggccagtggagctctggtcatcagtaactccagcgaggccgacacgggcccgtac cgatgcgtgatcgagaatgccggacccatcaagaccagcgaagaggcgcacttacacgtt ctgccggaatccggagaggagaggaccctggagtttctcctggagcctcaaccggtgatt aaagtggtgggggagagcgtgctgctcccgtgtgtggtgacgggatatcccacagcctcc gtcacgtggatgcacagagaccagctcatcgaggacagcacgggccgcttcgaggtgctc ggcggaggcagtctgcagatcttcaatctcaccgaggaagacgccggtgtgtacaactgt ctggcagacaacatcaacggatccatcgaggcccaggctgagctcacgctgagagctccc cctcacttcctgaagaaacctgctaacgtatatgctcatgaagccacagacgtaatcttc gagtgtgaggtcaccggctcaccggctcccaccatcaaatgggtgaagaacggagatgcc gtcattcccagcgactatttcaagatcattaaggagcagaacttgcaggtgctgggactg gtcaagtcagatgaaggtttctatcagtgtttagctgagaatgacgctggtaatgtgcag tcgagtgctcagctcatcatactggatcaagggtcccgagtcggcgctggtcccaaaccc tccggcccgcgggacgtcgtggcctcgctggtgtccactcgcttcatcaaactgacctgg cgtgttcccgccgaaccacacggagaggacgtcacctactccgtctactacagcctggag ggcactaacagggagaggatggtgaacaccagtcgtccaggagagatgcaggtcaccatc cagaacctcatgccagactccacgtatgcctttcgtgtggtggcgcacaacagaaacggc cctggagagagttcagcgccgctgagagtggccacccagcctgaagtccaggttcctggt cctgctcctaaccttcatgcagtggtcacgtcccccaccacagtgagtctcagctgggac gtgcccctcataggcaatggagagatcctaaactacaagatctaccacatggagaagggc atggacactgagcaggatctggatgtgaacaccctgtcctacaccatgactggactgaag aagttcacggagtacagtttcagagtggtggcctacaacaaacatggacctggagtctcc actgaggacctttctgtgcgcacatactcggatgtccccagcgctccaccacagaacatg acggttgaagtgctgaactcgaagagcatcatgatcagatggcaacctccgccggcagag gctcagaacggcgagatcatcggctacaagatccgctacaggaaggggacgaggaagagc gaggtggcggagatcacttccggatcgcagctctatcagctcatagatggtctgcagcga ggcactgaatacatgttgcgagtggcggccatttcggtgaacggcacgggtcccgccaca gattgggtcacggctgagacgttcgagagcgatctggacgagacaagggtgccggacgtc cccagctccttacatgtgcggcctctggtgaacagcatcgtagtgagttggacgcccccg gagaaccaggacatcgtggtgaggggttacactatcggctatgggatcggcagccctcac gcacagaccattaaagtggactacaaacagagatactacaccatcgagaacttgaatccc agctcacactacgtcatcacactgaaggcctacaacaacgtgggggagggaatccctgtg tacgagagcgccatcacacgaccccagtcagaccccatagaccctgatgttgatttgtac gaacttttccatgctccatacactccagtaccagaacctttacccatgctgcctcctgtg ggcgttcaggcgtccgttctgggccacgacaacatcaaagtcacatgggcggacaactcg ctgcccaagaaccagaagatcacagatgcacgctattacacggtgcgctggaagaccaac atacctgcaaacacaaagtttaaggtggctaataccaccacactttctcacacggtggtg ggtcttaagcccaacactttgtatgagttctcggtcatggtgacgaaggcccggaggacc agcacctggagcatgacagcacatgggacaacttttgaaacaatcccaagttctgcacct aaagatgtgactgtagtgagcaaagagggacgaccacgaaccatcatcgtcaactggcag ccgccttcagaagccaatggcaagatcacaggatacataatttattacagcactgatgtg aatgcagtggttcatgattgggtcattgaaccagtagtgggaaacaggctaacccatcaa attcaggagctgacccttgataccacctactacttcaagatccaggcgcgcaactccaag gggatgggtcccatgtctgaagctgtccagtttcgcactcctaaagccgaaccctctgac aaaatggctaatgaccaagcttcaggaccagtgaaagtaggaagacccccgtcaccagat caaggctttggaccaggtgggaaaccagacatgtctggcactggtgataaccacatcctg gttattgtcatcattgtgtccgtgggagcatttaccatcattgtggtggtggttggcgcc ttcctgtgtacacgccgtaccacaacacagcagaagaagaaacgtgcagcctgcaagtcc gccaatggatcccacaagtataagggcaactccaaagatctgaagccaccagacctctgg atccaccacgaacgtttggagctaaagcctattgacaaatcgcccgaaaccaatccagta atgaccgacacgccaatcccccgatcctccaagacanntcaccccgttgacggttccatg gatcctatgctccagagacgtaactcgtaccgcggccatgaatcagaggacagcatgtct acactggcaggccgtcggggaatgagacctaaaatgatgatgccctttgatgtacaaccc cctcagcctgtgattagtgctcaccccatccattccctcgataaccatcaccatcattat cacttgggcagcctggcctcgccgacacgcggctatctccaccaccagagcagcacacgg tccatcgccacccccatctctcatctagacagggcagagtccacagagtctgtaaggaac acccctagtgccgacctgctcccaccgtctgggcagccctcctgtaccactgacctttca gagacagacattagctaccacagctcagtcactgaggaggagccagctttcggtacgccc acagcacacgttcgtcccacacaccctctcaagagttttgcagtgccggccgtcccagct caccccatgtatgactcggcattgcctagcactccattgctgtctcagacagttaaaaca gcctctatcggtacattgggaaggacgagaactccaatgcctgtcatagttccaagtgca ccggatggttcggaaggcatcagacttcatgaagatgcagggagtaattacgagacggat gagttgactgaggaaatggcccatctggagggcttaatgaaggacctaaacgccatcacg acagcctga

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