Pimephales promelas (fathead minnow): 120492667
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Entry
120492667 CDS
T08155
Symbol
kars1
Name
(RefSeq) lysine--tRNA ligase isoform X1
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
120492667 (kars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pprm01007
]
120492667 (kars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pprm03016
]
120492667 (kars1)
Enzymes [BR:
pprm01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
120492667 (kars1)
Amino acid related enzymes [BR:
pprm01007
]
Aminoacyl-tRNA synthetase
Class II (A)
120492667 (kars1)
Transfer RNA biogenesis [BR:
pprm03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
120492667 (kars1)
Prokaryotic type
Other AARSs
120492667 (kars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
DUF374
Motif
Other DBs
NCBI-GeneID:
120492667
NCBI-ProteinID:
XP_039546792
LinkDB
All DBs
Position
Unknown
AA seq
601 aa
AA seq
DB search
MLTLVRICRLQAFRAQTFALPSSQTLPLLIQGSRWRSGKSELKRRMKAEKKAAEKEAKVK
EQQEQETNDKPEQNAFGADEETLDPNQYFKIRSQAIQALKGTAEDPYPHKFHVDLSLMEF
IERYSHLQPGDHLTDVVLSLSGRVHAKRASGAKLLFYDLRGEGVKLQVMANSRNYKSEED
FVHINNKLRRGDIIGVRGNPGKTKKGELSIIPVEMTLLSPCLHMLPHLHFGLKDKETRFR
QRYLDLILNDTVRQKFVTRSKIITYLRSFLDQLGFLEIETPMMNLIPGGAVAKPFVTYHN
ELNMNLYMRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNPEFTTCEFYMAYADYH
DLMEITEKLLSGMVKHVTGGYKVTYHPDGPEGQAQEIDFTPPFRRISMTRDLEKELGVKF
PAPDTYDSDETRKFLDDLCVQKEVECPPPRTTARLLDKLVGDFLEVKCMNPTFICDHPQI
MSPLAKGHRAQKGLTERFELFVMKKEICNAYTELNDPVRQRELFEQQAKAKAEGDDEAMF
IDETFCTALEYGLPPTAGWGMGIDRLTMFLTDSNNIKEVLLFPAMKPEDNKAASPAEGTS
V
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgttgactctggtcagaatatgcaggctgcaagcgttcagggcgcagacgtttgctctt
cccagttcgcaaaccctgcctttgcttattcaaggaagtcgctggagaagtggcaaaagt
gagttgaaaaggcgcatgaaagctgagaagaaggcagctgagaaggaagccaaggtcaaa
gaacagcaggaacaggagaccaatgacaagccagagcaaaatgcatttggggccgatgag
gaaaccctggacccaaatcaatacttcaagatccgttctcaagccattcaagccttgaag
ggaacagctgaagacccgtaccctcacaagttccatgtggacttgtcgcttatggagttc
attgagcgatatagccatcttcagccaggggaccacttgactgatgttgtcctcagttta
tcaggtcgtgtccacgctaagagggcttcaggtgccaagctgctgttctatgacctgcga
ggagaaggggtcaagctgcaggtcatggccaactccaggaactacaaatcagaagaagat
tttgtgcacattaacaacaaattaaggcgcggggacatcattggtgtccgggggaaccct
ggcaagacaaagaagggcgagttgagcatcatcccagtggagatgacactgttgtctccg
tgccttcatatgcttccccaccttcactttggcttgaaagacaaggaaaccaggttccga
cagcgatatctggacctgattcttaatgacaccgtgcgacagaagtttgttacccgttcc
aagattatcacttatctccgcagttttctggaccagcttgggtttcttgagattgaaacg
ccaatgatgaatctgatacctggtggagctgtagcaaaaccttttgtcacctaccacaat
gagctcaatatgaacctctacatgagaattgctcctgagctttaccataagatgctggta
gtcggtgggatcgaccgtgtgtatgagatcgggcgtcagttccgtaatgaaggcatcgat
ctcacccacaaccccgagttcaccacatgcgagttctacatggcttatgcggactatcat
gacctgatggaaatcacagagaagcttctctcaggaatggtgaagcacgtgaccggaggc
tataaggtgacgtatcatcctgatggtccagaaggacaagcccaagaaatagacttcact
cctcccttcagacggatcagcatgacccgagacctggagaaggaattgggagtgaagttt
ccagctcctgacacctacgacagtgatgaaacgcgcaagttcttagacgacctttgtgtt
cagaaagaagttgaatgccctcctcctaggacgactgctcgtcttcttgataagttggtg
ggagacttcctggaggtgaaatgcatgaacccaacattcatctgtgatcatccacagatc
atgagtcctctagcaaaagggcacagagcacagaaaggtctgaccgagcgcttcgaactc
tttgtgatgaagaaggagatctgcaatgcctacaccgagttgaacgatcccgtcagacaa
cgagaactgtttgagcagcaggctaaggccaaggcggagggtgacgatgaggcgatgttt
attgatgagaccttctgcactgccttggagtacgggcttccacccacggcaggatggggc
atgggcatcgaccggctcaccatgttcctcacagactccaacaacatcaaggaggtgctt
ctcttccctgctatgaaacctgaagataataaagcagcttcacctgcagagggcacatcc
gtgtaa
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