Pimephales promelas (fathead minnow): 120492751
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Entry
120492751 CDS
T08155
Symbol
cdhr5a
Name
(RefSeq) cadherin-related family member 5 isoform X1
KO
K16505
cadherin-related family member 5
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pprm04515
]
120492751 (cdhr5a)
Cell adhesion molecules [BR:
pprm04515
]
Cadherins
Cadherin related
120492751 (cdhr5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Glycophorin_A
Motif
Other DBs
NCBI-GeneID:
120492751
NCBI-ProteinID:
XP_039546930
LinkDB
All DBs
Position
Unknown
AA seq
706 aa
AA seq
DB search
MQLKRKSTTTIFGCVFALFIPKICFADKICTAPSEPVTIKENNTDDTLVVHINVTTKDVT
LNLTENPGNAFYLRGSELIAKKGLDFETLSGPEELTVQVRCNKTGYRSITLIVIVRVENI
NDNYPSFGQSEYTLNVNELTPVNTSIGLIEAVDDDSEVLYYSIEPTLNRYFRLENMYTPK
ILVNKVLDYDVIQQVKLLLYAQDTPLPLQHTPLPSQPSERSFTATATITVNIKDIDNRPP
WFQPCTRVTSGNAKICLSLGYRGRVNLTEKQDGALQLQPGPVYARDGDKSRNEEISYKIV
RGNEDNIFQIDENSGNISMLKPADIAGPISLLVLASQVLNRDQFATTSVTIDVMKKSRNP
PRFEKERYEGYVYISSGPENMVLRDRTTNRPFRVRARDEDFASGINPDIRYEVQYSSYVN
ITTDGFILLKKAVRTDSFALQLRAVDVSTGESGTAALAVLVIPSAGVQSPDESFRAGDMA
LLGFVMAALLVLCLIVIGYLISRVKKGNPDAFKSECLGSCLKFTQPPNRPRPRDSMQFNN
DGFLNEGDTGRSRARRAELREGRLDAVQAARVRVIPRERLRHCRSCGLQTSFNHSHHSPV
VQTKGKANKQRVKSILAKERRKDDGHKSVWFKESEDSSDIEVEIIPDTIGIKPEDEVEKG
EGDFASHPLEDSQMELGDLIMSNIQDLSSREISDGRDGLNTDRKDP
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgcaattaaagcgtaaatccacaacaaccatcttcggctgtgtatttgcattattcatc
cccaaaatctgctttgctgacaaaatttgtacagccccttcagagcctgtgacgattaaa
gagaacaacacagatgacacacttgttgtccatatcaatgtaacaacaaaggatgtaacg
ctgaatctcacagagaatcctggaaacgcgttctatctgagaggttcagaactgatagca
aagaaaggcctggactttgaaacactttcaggtcccgaagagctaactgtgcaggtccgg
tgtaataaaactggctacagaagtatcactctgattgtgattgttcgtgttgagaatatc
aatgacaactatccatcatttggtcagagcgagtacacacttaacgtaaatgagctcaca
ccagttaataccagcattggcctgattgaagcagtcgatgatgattctgaggttctgtat
tattcgatagaaccaactttgaacagatacttcagacttgagaacatgtatacaccaaaa
atcctcgtgaacaaagttttagattacgatgtcatccaacaagtgaaactgctcttgtat
gcgcaggatactccactgccattgcaacatactccactgccatcacagccgagtgaacgc
tccttcacagctacagcaaccatcaccgtcaatattaaagatattgataaccgtcctccg
tggtttcaaccatgtacaagagtgacctctggtaatgccaaaatctgcctgagcctcggc
tacaggggcagggtgaacttaacagagaagcaggacggagccttgcaattgcagccaggt
ccagtgtatgccagagatggagataaaagcagaaatgaagagataagctataaaattgtt
cgaggaaatgaagacaacatatttcagatcgatgagaactccggcaacatttccatgctg
aaacccgcagatatagcaggcccaatctccctcttagttttggcttcccaggtattaaac
cgagatcagtttgccaccacttcagtcaccattgatgtaatgaaaaagagcagaaatcct
ccgaggtttgagaaagaacgatatgaagggtatgtctacattagttcagggcctgaaaac
atggtgctaagagacaggacgaccaacagacccttcagagtcagagcaagggatgaagat
ttcgcaagtggaatcaatcctgacataagatatgaggtgcaatacagcagctatgtcaat
atcacaacagatgggttcatacttttgaagaaagcagttcggaccgattccttcgctttg
cagcttcgtgcggtggacgtgtccactggtgagtcagggacagctgctctcgctgtcctt
gtcataccatccgcgggggtccagtcgcccgacgagagcttccgcgcaggagacatggct
ttactgggcttcgtaatggccgctttactggtgctctgcctcattgtgatcggctatctg
atatcccgtgtcaagaaggggaatcctgacgcgttcaagtctgagtgtttagggtcatgc
ttgaagtttactcagccccctaacaggccaagaccgagagatagcatgcagttcaacaat
gatggtttcttaaatgaaggagacactgggagatccagagccaggcgagctgaactgaga
gaagggagactggatgcggttcaagcagcaagagtgcgagtgattccccgtgaaagactg
aggcactgccgatcctgtggactccagacgagtttcaaccattcccatcacagtccggtc
gtccaaaccaaagggaaggccaataagcagagagtcaagtccattctggctaaagagagg
aggaaggatgacggacacaagagcgtctggttcaaggagagcgaggattcttcagatatc
gaggtggagatcatccctgacactatagggattaagcctgaagacgaggtggagaaaggc
gaaggggatttcgcttcccatccactggaagacagtcaaatggaactgggggatttgatc
atgtcgaatatacaggacttgagtagcagggagatttctgacggcagagacggactgaat
acagacagaaaggatccgtga
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