Pimephales promelas (fathead minnow): 120493080
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Entry
120493080 CDS
T08155
Symbol
farp2
Name
(RefSeq) FERM, ARHGEF and pleckstrin domain-containing protein 2 isoform X1
KO
K06082
FERM, RhoGEF and pleckstrin domain protein 2
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
120493080 (farp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
PH
FERM_C
FERM_M
FA
FERM_N
SOS1_NGEF_PH
PH_13
IQ_SEC7_PH
RHG20_PH
PH_11
PH_20
Motif
Other DBs
NCBI-GeneID:
120493080
NCBI-ProteinID:
XP_039547450
LinkDB
All DBs
Position
Unknown
AA seq
1053 aa
AA seq
DB search
MGEIEGTYRSLQTPAGTRLGAQNNTGISTLEPGQSLSSAMGAGGKGHKGLQIRVQGLDDV
QEFYELESKADGQALFSEVFRRINLIESDYFGLEFQNLHMNWVWLDPTKLIMKQVRRPMN
TLFRLSVKFFPPDPGQLQEEFSRYLFSLQIKRDLIDGRLNCTENTAALLASHLVQSEIGD
YDDIADREFLKMNKLLPYQERVQEKIMELHRRHTGQTPAESDFQVLEIARKLEMYGVRFH
PAADREGTKINLAVAHMGLQVFQGHTKINTFNWSKIRKLSFKRKRFLIKLHPEVHGPHQD
TLEFLMASRDQCKIFWKNCVEHHSFFRLLDQPLPKSKAIFFSRGSSFRYSGRTQKQLVEY
VRDSGMRRTPYQRRNSKVRMSTRSLVSDVLKQNLSFNDSLRAPVCPSSVTASFHSLHAPS
LPMRTETPNQPLNLQQMHQPPRAPSPTQQDSMQDSIQNSQSTYAFPDSLTAIDSPQLSSF
NVKGALCQSPSFQMSTLSLPGQSPSPLNSPILNEVGTARLEEDEEGRRKRYPTDKAYFIA
KEILTTERTYLKDLEVITVWFRSAVIKENAMPEGLMTLLFSNIDPIYEFHRGFLKEIDQR
LALWEGRSNAHVKGDYQRIGDVMLRNMCALKEFTGYLQKHDEVLTELEKATKRVKKLETV
YKEFELQKVCYLPLNTFLLKPIQRLMHYKLILERLCKHYAPQHKDFDDCREALKEVAEIA
AQLQSSLIRLENFQKLTELQRDLIGIENLTAPGREFVREGCLYKLTKKGLQQRMFFLFSD
MLLYTSKGVTATNQFKVHGQLPLHGMILIVLDAPVEESENEWSVPHCFTIYSAQRTIVVA
ASSKVEMNKWIEDLNMAIEMSKKCQEKSDLLLDPSLCDRSNRSSDEVSLEQESEDDMNSS
RCSLDKQSHHRANTTMHVCWHRNTSVSMSDHSLAVENQLSGYLLRKFKNSNGWQKLWVVF
TNFCLFFYKTHQDDFPLASLPLLGYTVSTPGESDSIHKEYVFKLQFKSHVYFFRAESEYT
FERWMEVIKSAASSTGRMSLLVPKGPVEMNGGS
NT seq
3162 nt
NT seq
+upstream
nt +downstream
nt
atgggtgagattgagggcacctaccgctccttgcagacccctgcagggacacggctcgga
gctcagaacaacaccggcatcagcaccctggagcccgggcagagcctcagttcggctatg
ggagcaggagggaaaggccacaagggccttcagatccgtgtccagggcttggacgatgtt
caggagttctatgagcttgagtcaaaagcagatgggcaagctcttttctctgaggtgttc
agacggatcaatctcattgagagcgattactttggtctggagttccagaacctgcatatg
aactgggtttggctggatcccaccaagctcataatgaaacaagtgagacggccgatgaac
acactctttcggctgtcagtgaagttctttcctcctgatcctggtcagcttcaggaggag
ttttctaggtacttgttttctctgcaaatcaagagggatctaatagatggtcgactgaac
tgtacagaaaacaccgccgccttgcttgcctctcatttggtgcaatctgagatcggtgac
tatgatgatatagcagacagggagtttctgaagatgaataaattgctgccatatcaggaa
cgtgtgcaagaaaagatcatggagctccaccgcagacacacggggcagaccccagcagaa
tcagatttccaggtcctggagattgctcgtaaactggagatgtatggggtacgctttcat
cccgctgctgaccgagaaggcaccaagatcaacctggctgtagcacacatgggcctgcag
gtctttcagggccacaccaaaataaacaccttcaactggtccaagattcggaagctgagc
ttcaagagaaaacgatttctaattaaactgcacccagaagttcatggtcctcatcaggac
acactggaatttctcatggccagtcgagaccagtgtaagatcttctggaagaactgtgtg
gaacatcactcgtttttccgtctgttagaccagcctctgcccaaatccaaagccatcttc
ttcagcagaggatcctccttcagatacagtgggaggacgcaaaaacagcttgttgagtat
gtgagggacagcgggatgagaagaactccttaccagaggaggaacagtaaggttcgcatg
tcgacacgttccttggtttctgatgtgctcaaacagaatctgtcttttaacgacagtcta
agggctccagtgtgtccttcctctgtcaccgcctccttccactccctgcatgcccccagc
ttacccatgcggacagagactccgaaccagcctctgaatctccaacagatgcatcagcct
ccaagagcccccagcccaactcagcaggactccatgcaggactccatccagaactcccaa
tccacctacgccttcccagactcgctgacagccattgacagcccacagctgtcttccttc
aatgtcaagggtgctctgtgtcagtcgccctccttccagatgtccaccctcagtcttccc
ggccagtcaccctcgcccctgaacagccccatcttgaatgaggtgggcaccgccagacta
gaggaagatgaagagggcaggaggaagagatatcccacagacaaagcctacttcattgct
aaagagattctgacaacagaacggacttacctgaaggatctggaggtcatcacagtgtgg
ttccgcagtgcagtgattaaagaaaacgcaatgcctgagggtctcatgaccctcctgttc
tccaacatcgaccccatatatgaattccacagaggctttctcaaagagattgaccaaagg
ctggctctctgggaggggcgctctaacgctcatgtaaaaggagattaccaacgaattgga
gatgtaatgctgcgcaacatgtgtgctctgaaggagttcacaggttacctgcagaagcac
gatgaggtgttaaccgagcttgagaaagccacaaagcgtgtgaagaagttggagacggtg
tataaggagtttgagctacagaaggtgtgctacctacccctcaacaccttcctgctgaaa
cccatccagagactcatgcactacaaactcatcctggagcgcctgtgtaagcattacgcc
cctcagcacaaagacttcgatgactgcagagaggccttgaaagaagttgcagagattgct
gctcagctgcagagcagtctgattcgactggagaactttcagaagctgacagaacttcag
agggatctgattggcattgagaacctcacggctccaggaagagaatttgtcagggaaggt
tgtctttacaagctcaccaagaagggtctgcagcagaggatgttttttcttttttcagat
atgctgctgtacacgagcaaaggggtgaccgcaaccaatcagttcaaagttcatggacag
cttcctctgcatgggatgattctcattgtgctggacgctccggtggaggagagtgagaat
gagtggtctgtccctcactgtttcaccatatattctgctcagcggaccattgtggtggca
gccagctccaaagtggagatgaacaaatggatcgaagatctaaacatggctattgaaatg
tcaaagaaatgtcaggagaaatccgatcttctgttggacccaagcctgtgtgatcgctcc
aacagatcatccgatgaggtgtctctggagcaggagtcagaggatgacatgaactcctcc
cgctgctccctggacaagcagagccaccacagggccaacaccaccatgcatgtgtgctgg
caccgcaacaccagcgtctctatgtctgaccacagcctagccgtagagaaccagctgtcc
ggttacctccttaggaagttcaagaacagcaacggctggcagaaactctgggtcgtcttt
accaacttctgcctgttcttttacaagacacatcaggatgacttccctctagccagtctt
ccgttgctaggttacacagtcagcaccccaggggaatcggatagcatccataaggagtac
gtcttcaagctgcagttcaaatcccatgtttacttcttcagggcagagagcgagtataca
tttgaaagatggatggaggtgatcaaaagtgcagcgagctccacgggacgcatgagtctt
ctcgtacccaaaggcccagtagagatgaacggggggagctga
DBGET
integrated database retrieval system
