Pimephales promelas (fathead minnow): 120493157
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Entry
120493157 CDS
T08155
Symbol
atg4c
Name
(RefSeq) cysteine protease ATG4C isoform X1
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04136
Autophagy - other
pprm04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
120493157 (atg4c)
04136 Autophagy - other
120493157 (atg4c)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pprm01002
]
120493157 (atg4c)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pprm04131
]
120493157 (atg4c)
03029 Mitochondrial biogenesis [BR:
pprm03029
]
120493157 (atg4c)
Peptidases and inhibitors [BR:
pprm01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
120493157 (atg4c)
Membrane trafficking [BR:
pprm04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
120493157 (atg4c)
Mitochondrial biogenesis [BR:
pprm03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
120493157 (atg4c)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C54
Motif
Other DBs
NCBI-GeneID:
120493157
NCBI-ProteinID:
XP_039547589
LinkDB
All DBs
Position
Unknown
AA seq
477 aa
AA seq
DB search
MCCDGFCSVANIKMETKETDEVEKLKSKFMSAWNNVKYSWALKSKTAFSRNSPVFLLGKC
YHFKAVDDESPTESCSAEALDVDVVTGNVDGFRRDFTSRVWLTYREVFPALPGSTLTSDC
GWGCTIRAGQMILAQALMLHILGRDWTWSEALTLEPLDAETWTSSAARRLVATLEASIQG
ERVQVTLPLCPAQGGAEEADSYLQEAYHRTIVSWFGDGPSAQLGIHRLVQLGMTSGKQAG
DWYGPAVVAHILRKAVDEAADAMLKGISVYVAQDCTVYSADVIDSHSAQKSSHCDPQGLN
TGAVPDSRAVIILIPVRLGGEKINPEYLSFVKSILSLEYCIGIIGGKPKQAYYFVGFQDD
SLIYMDPHYCQSFVDVSTSDFPLQSFHCPSPKKMPFSKMDPSCTIGFYSKNVEHYERIFN
ELSKILEPSSKEKYPAFTFMKGHWKDYELSMAAEKREWPFIRDSRKAGTTSGDFVLL
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgtgctgtgatgggttctgctccgtggctaatattaaaatggagactaaagagaccgac
gaggtggagaaactgaagtccaagtttatgtcagcatggaacaatgtgaagtacagttgg
gctctcaaatcaaaaactgccttcagccgtaattctcctgttttcttgttggggaaatgc
taccacttcaaggctgtggatgatgaaagtcctactgagagttgttctgctgaggcatta
gatgtcgatgttgtcacaggcaatgttgatggatttcgaagggatttcacctcacgagtt
tggctgacctatcgagaagtgtttcccgcccttccaggctccacccttacttcagactgt
gggtggggttgtacaattcgggcagggcagatgatattggcccaggctctcatgcttcac
atcttgggtagagactggacctggtccgaagcactgaccttggagccgttggatgcagag
acatggaccagcagtgctgcacggagactggtggccacattagaggcctccattcaggga
gaaagagtacaggtcaccctgcctctctgtcctgctcaaggaggggctgaggaggccgac
tcatacctacaagaggcatatcatcgcaccattgtgtcctggtttggggacggaccatca
gcccagctgggcatccacagactagtgcagctaggaatgacttctggaaaacaggctgga
gattggtacggcccagcagtggtggcacacatactcagaaaagctgtggatgaggcagca
gatgcaatgctgaaagggataagtgtttatgtagcacaggactgcactgtgtacagtgct
gatgttattgatagccattcagcgcagaaaagcagccactgtgatcctcagggactcaat
actggagctgtccctgatagtagagctgtcatcatcctcattcctgtgagattgggtgga
gagaagatcaacccagaatacttaagctttgtcaagagcatattaagcttagagtactgt
atcggcatcattggaggaaagccaaagcaggcctactattttgttggatttcaagatgac
agcttgatttacatggatcctcattactgtcagtcttttgtggatgtcagcacaagcgat
ttccctctgcagtcctttcattgcccatcaccaaagaaaatgcctttcagtaaaatggac
ccgagctgtaccattggattctactcaaaaaatgtcgaacactatgaaagaattttcaac
gaactttcaaagatattggagccctcgtcgaaagagaagtaccctgcattcacctttatg
aagggacactggaaggattatgaactttcgatggctgcagaaaagcgagaatggcctttc
atcagggactcaagaaaagcagggacaacatcaggagactttgtgctgctctga
DBGET
integrated database retrieval system
