Pimephales promelas (fathead minnow): 120493279
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Entry
120493279 CDS
T08155
Symbol
siah1
Name
(RefSeq) E3 ubiquitin-protein ligase Siah1 isoform X1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04115
p53 signaling pathway
pprm04120
Ubiquitin mediated proteolysis
pprm04137
Mitophagy - animal
pprm04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120493279 (siah1)
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
120493279 (siah1)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
120493279 (siah1)
09143 Cell growth and death
04115 p53 signaling pathway
120493279 (siah1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pprm04121
]
120493279 (siah1)
Enzymes [BR:
pprm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120493279 (siah1)
Ubiquitin system [BR:
pprm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
120493279 (siah1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
Trm112p
Motif
Other DBs
NCBI-GeneID:
120493279
NCBI-ProteinID:
XP_039547709
LinkDB
All DBs
Position
Unknown
AA seq
334 aa
AA seq
DB search
MSATVRLQPVYSWKGVLKLFSCIAARTASKPKEVHTFQGKKKDLLGNHMDEEMSRQTATA
LPTGTSKCPPSQRVPTLSGTTASNSDLASLFECPVCFDYVLPPILQCQSGHLVCSNCRPK
LTCCPTCRGPLGSIRNLAMEKVANSVLFPCKYASSGCEVTLPHTDKAEHEELCEFRPYSC
PCPGASCKWQGSLDAVMPHLLHQHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGFH
FMLVLEKQEKYDGHQQFFAIVQLIGTRKQAENFAYRLELNGHRRRLTWEATPRSIHEGIA
TAIMNSDCLVFDTSIAQLFAENGNLGINVTISMC
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctacggttagactacagcctgtgtactcatggaagggggtgctcaagctcttc
tcttgcatagctgcccgaactgctagtaaacctaaagaggtccacacatttcaaggaaaa
aagaaagacttacttgggaatcatatggacgaagaaatgagtcgccagactgccacagcg
ctgcccacaggaacctccaagtgtcccccttctcagcgcgtcccaaccttgtcaggcacc
accgcatccaacagtgacctcgccagcctatttgagtgtcctgtctgttttgactatgtg
ctgccgcccatcctgcagtgccagagtggccatttggtttgtagcaactgtcggcccaaa
ctcacctgctgccccacctgcagaggcccacttgggtcaatccgcaatttggccatggag
aaagtggccaactcggttcttttcccctgcaagtatgcctcatcaggctgcgaagttact
ctaccgcatacagacaaggctgaacacgaggagctttgtgaattccggccatactcttgc
ccttgtcctggcgcatcctgcaagtggcagggatctctcgatgccgtcatgcctcacttg
ctgcaccagcacaagtccataaccacgctacaaggtgaggatattgtcttcctggccaca
gacatcaacttgcctggggcagtggactgggtcatgatgcagtcgtgcttcggcttccat
tttatgctcgtgctggagaagcaggagaaatatgacggccaccagcagttctttgccatc
gtgcagctgatcggcacacggaaacaagcggaaaacttcgcctaccggttggagttgaac
ggccaccggcggcgactcacctgggaggcgacgccacgttccatccatgagggcattgcc
actgccatcatgaacagtgactgcctggtgtttgacacctctattgctcagctgtttgca
gagaatggcaacctgggtatcaatgtcaccatatccatgtgctga
DBGET
integrated database retrieval system
