Pimephales promelas (fathead minnow): 120493293
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Entry
120493293 CDS
T08155
Symbol
lft1
Name
(RefSeq) lefty1
KO
K04668
left-right determination factor
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
120493293 (lft1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
pprm04052
]
120493293 (lft1)
Cytokines and neuropeptides [BR:
pprm04052
]
Cytokines
Transforming growth factors (RSTK binding)
120493293 (lft1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TGFb_propeptide
TGF_beta
EcpB_C
Motif
Other DBs
NCBI-GeneID:
120493293
NCBI-ProteinID:
XP_039547738
LinkDB
All DBs
Position
Unknown
AA seq
358 aa
AA seq
DB search
MSSIRSACLLCAALFAMVRGFTHEDMKEALLNKLGLNEVPRIHKRDLENLVIPAHIKNKY
ISMLKLHHARKRRSLPSLAGILRGIPGNADISGEFVYSDTTRQRVVFEMTSRIPENSEVT
MAELKLFKKAPHKRSVPERKGHRPVNNARVSIYWVEPLEDGSNRTSLVDSRLIPIHETGW
KSFDVTQAVHYWSKSRMEMPMHLEVWIEGERPGSYAAEMAKCVHFTTQDANDNTLGKPEL
VLYTLNLEEFGSSGDCETNKDSERCCREKYFINFRALTWTQYWIIEPSGYQAFRCNGGCR
QPKRNYGYGERKCVVVESAPLPMMYLVKKGDYTEIEVAEFPNMIVEQCGCAMDNISVV
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcaatccgttccgcttgcctcctttgcgcagcacttttcgcgatggtgaggggt
ttcacccacgaagacatgaaagaggctctgctgaacaaattgggacttaatgaagttccg
agaattcacaaaagggatctggagaaccttgtgattccagcgcacattaagaacaaatat
atttccatgctgaaattgcaccacgcaaggaaacggcgctcgcttcccagtttagccggc
atcctgaggggaattcctggcaatgcagacatttctggtgaatttgtatattctgacacg
acacgtcaacgtgtggtctttgagatgacatcaagaatccctgagaacagtgaagtgacc
atggcagaactgaaactgttcaagaaagccccacataagcgctccgtcccagagagaaag
ggccacaggcccgtcaacaacgccagggtcagcatctattgggtagaacctctggaagac
gggtccaacagaacttcactagtggattccagattgattcccattcacgaaaccggctgg
aagagctttgatgtcacccaggcagtacactattggtcgaaaagccgaatggagatgccc
atgcaccttgaggtgtggatcgagggcgagagacccggcagttacgcggcagagatggcc
aagtgtgtccacttcacaactcaagatgcaaacgacaacactctgggaaaacctgagctt
gttctttacaccctcaacctcgaagaatttgggtctagtggagactgtgaaaccaacaaa
gacagtgaaaggtgctgcagggaaaaatacttcatcaatttccgagccttgacttggacc
cagtactggatcatcgaaccgtctgggtatcaggcgttccggtgcaacggcggctgccgg
cagcccaagcgcaactacggctacggagagagaaagtgcgtagttgtggagagcgcgccg
ctaccgatgatgtatttagtgaaaaagggagattatactgaaattgaggtggctgaattc
ccaaacatgattgttgaacaatgtggatgcgcaatggataatatttcagttgtatga
DBGET
integrated database retrieval system