Pimephales promelas (fathead minnow): 120493341
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Entry
120493341 CDS
T08155
Name
(RefSeq) denticleless protein homolog isoform X1
KO
K11790
denticleless
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pprm04121
]
120493341
Ubiquitin system [BR:
pprm04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
120493341
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_IFT122_1st
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
WD40_Gbeta
DSE1_N
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR3_2nd
EIF3I
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_NOL10_N
Beta-prop_EML
Beta-prop_Aladin
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_DCAF12
Beta-prop_WDR41
ASA1
Beta-prop_SCAP
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
CFAP251_N
WD40_RFWD3
Beta-prop_WDR19_1st
ANAPC4_WD40
Beta-prop_DCAF4
Beta-prop_SPT8
NBCH_WD40
WDR90_beta-prop_4th
DNAI3_WD
PEP5_VPS11_N
MIOS_WD40
Beta-prop_WDR11_1st
DUF2844
TAF1C_beta-prop
Beta-prop_Nup120_160
VPS11_N
Motif
Other DBs
NCBI-GeneID:
120493341
NCBI-ProteinID:
XP_039547803
LinkDB
All DBs
Position
Unknown
AA seq
657 aa
AA seq
DB search
MTLFHHVVDRGVIKRRFNAGERRGYPLSSLLDGYQCARQDEHISYGASAAAVPPFGCTFS
SAPGQQNSLAVANEEGFVTIFNTREKKSSVLKEWQAHDNAVFDIAWVPGTNSLVTASGDQ
TARLWDVITADLLGTFKGHQCSLKSVAFSKQERAVFSTGGRDGNIMIWDTRCSKKDGFYR
QVKQISGAHMKPERYTPQNKKRRGMAPPVDSQQGVTVVLFCDENKLISSGAVDGIIKMWD
LRKNYTAYYHNPLPLQTYPYPGSCTRKLGYSGLSLDSTGSRLFSNCTDDNIYMFNISGLK
TTPVAVFSGHSNSSFYVKSSVSPDDQFLASGSSDHQAYIWKISDPKQAPMMLQGHSQEVT
SVAWCPTDFTKIASCSDDNTVRIWRLKRRPDSENSSNRDANIVGWTLRKVQSPTRTPGRY
NPVELTPAKSPGSERVVSLASPQPASCAPTGADLPLPSNTSAPSAKLSSPKIPSSIQQWV
SRSSSPRHQGTSPLRKVLTPVLQGPSSERRAKRRLETGDCASSGLGGEGEGVSELYPDVK
RSRSSVSAENCSEEKGELFSLKTDERLCSTGQAGAGKENSSPRRNDWLSVISQRFKGSTQ
PKSPNGSSKRQDARTHSAPAAISPRPMTVISPTPNKKASPSRPMKKISSYFMKRTQD
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgactctttttcaccatgttgttgatcgaggagttataaaaagacggttcaatgcaggc
gagcgtcgaggctatccgctgtcctctctgctggacgggtatcagtgcgcgcgacaggac
gaacacatttcatatggagcctcggctgctgctgtcccgccgtttgggtgcacgttttcc
tctgctcctggtcaacagaacagccttgctgttgcaaatgaagaagggtttgtgaccatc
ttcaataccagagaaaaaaagagctcggtcctgaaagagtggcaggcacatgataatgct
gtttttgatattgcctgggttcctggtacaaacagcttggtaaccgcctctggtgaccaa
accgcccgtctgtgggatgttatcactgctgacctgctgggaacttttaaaggacatcaa
tgcagtcttaaatcggttgctttttccaagcaagagagagctgtgtttagcactggaggc
agagatgggaatatcatgatttgggatacaagatgcagtaaaaaagatggtttctacagg
caagtaaaacagatcagtggtgcccatatgaaacctgaaagatatacacctcaaaacaag
aagaggcgtgggatggcgccccctgtggactcccagcagggtgtgacagtggttctcttc
tgcgatgagaacaagctcatctcctcgggagcagtcgacgggatcattaaaatgtgggat
ttgcggaagaactacactgcgtactaccacaaccccctccctctacagacctatccctac
ccaggctcctgcacacgcaaactaggatattctggactgtcactggactctactggctcc
agactgttctccaactgcacagatgacaatatctacatgttcaatatcagtggattgaaa
accactccagttgctgtgttcagtggccacagtaactcctcattttatgtgaagtccagt
gtcagcccagatgaccagttcctggccagtggttcgagcgaccatcaagcttacatatgg
aagatttcagacccaaaacaagctcccatgatgcttcagggccatagtcaggaagtcaca
tcagtggcctggtgccccaccgatttcaccaagatcgcttcctgttctgatgacaacacc
gttaggatttggcgcctgaaacgcagaccagatagcgaaaactcatcgaaccgagacgca
aacatcgtaggctggacacttcgtaaagtccagtcaccaaccagaacacctggccgttac
aaccccgttgagctcactccagccaaaagtcctggttcagagagggtggtttctctggct
tcaccccagcctgcttcttgtgctcctacgggtgccgatttacccctcccatcaaacacc
tctgcaccttcagccaagctcagcagccccaaaatcccctcgtctatccagcagtgggtc
agccgcagcagctccccgcgtcaccagggcacgtctcctctccgtaaggtgctcacgcca
gtcctccagggcccttcatcagagcgccgtgcaaagcgacggctagagacgggtgattgc
gctagctctggtttgggaggggagggtgaaggggtgtctgaattgtatcccgacgttaag
cggagcaggagttcggtgagcgcagagaactgttctgaggagaaaggtgaactattcagt
ttgaaaacagatgagaggctctgctcgactggtcaagccggcgctggcaaggagaacagc
tctccgagaaggaatgattggctgtcggttatcagtcagagatttaaaggatcgactcaa
cccaaaagcccaaacggcagcagcaaacggcaagatgcaagaacacacagcgctccagca
gcgatatcaccgcgtcccatgacggtcatctctccaacaccaaacaagaaagcatcaccc
tccagacccatgaaaaaaatctcaagctacttcatgaaaagaacccaagactga
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integrated database retrieval system
