Pimephales promelas (fathead minnow): 120493378
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Entry
120493378 CDS
T08155
Symbol
tprb
Name
(RefSeq) LOW QUALITY PROTEIN: translocated promoter region b, nuclear basket protein
KO
K09291
nucleoprotein TPR
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120493378 (tprb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pprm03019
]
120493378 (tprb)
Messenger RNA biogenesis [BR:
pprm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
120493378 (tprb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_MLP1_2
Cation_ATPase
Motif
Other DBs
NCBI-GeneID:
120493378
NCBI-ProteinID:
XP_039547886
LinkDB
All DBs
Position
Unknown
AA seq
2351 aa
AA seq
DB search
MAAVLQQILERSEISKLQKTVLTKLEKYISDQQCEVDFLKAQQEQYRVDSEQQYFDIEKR
FAESQSQFVSQTQEHQILKQDYCKLEEELKSLRDNNKEQASSYTKLESQQNELSKAKDEL
EAEKRELVRTLERRSQEMEQQSEDLKRLNDRLLEVNAERMQLQLKLDGSEASEVSIKYKE
QRMEQEKDLLQGQVTWLNTELKAKSEALLSLSRQRGNEILELQCNLNNKEDEITHLKDQV
TSLKASNENLQKQAEEMITKMREAKEQQASLEEKFSNELNANIKLSNLYKGAAADAEAKG
EELSRAVEELHKLLKEAGEAHKALEVKMAELEGRKDKEITELKGKISSQEKELENANELL
SDTKHRGTASILAEEHVTTMSPTAAAVAKIKPGMKLTEIYTAYVETQEQLQREKLETKQL
NKYLDDIVQEMEAKAPILKRKSEEYERTQKSVSSLSSKLQQAVMEVHRRQKEADEVNKRA
SVLERDNQRFEVQLADMAQQVRVLLIELEEARGNHVMREEDEMCSADVSSTSEVISQHLV
TFRGIEELQQQNQRLLVALRDLSEAKEKDELEVDTMKRSEVEKYLEDLQRELEQLKEKRA
QDLQKVDAVARQRDMFRMLLTQATGVTFPQGAVAEELILTSTPRRSPAVTPTAGTPTGLD
ATAIESTESVEAKAALKQLQEIFVAYKKEKNESEKALTEQSEKLQDQVTELRSENTKIST
QLEFTSKRYEMLQDNVEGYRKEIASLNEKTQKQAAAIQLSEQTIHTLTQDRRAATEKLTI
AESEAANLRKERDMLKMVEIRLTQEKEIFQAQQLGQNMLLTNLKSIQATLERSETETRQR
LTAQIEKQEREIAQLQKRLENEVEQKHLLARNQDMQLMDAKKKLETQTAQHHRTREQLGA
AQLELNNLRLQISSGETRLVSPTVHTGLQGGEGDMEALRAQLKQAENKVEELEERLKNTT
DSMEQYKAISLSLEESLDKEKQVTEQVRSSVETQMEEAXEQYKQLEQKLLEMDKVKQSLQ
EEKNKAVVAVEQELSELKKSLSSLQSEHKSVLERASVAAAQEQQAILDSQQQAKMAAEAQ
DKYEREMLLHAANVEALQAAKAQALQVSLLRQQLEEKVQSTSAQLLEARVSWEEQEKILK
EEQCKIESRCEDLQRQNTLLHEQIQTLSGQMASQLQRAANESPLNVSLTEEGKSQDQLLE
ILRFVRREKEIAESRFEVVQGESLRHRLRVEHLERELKDVQESLSAERERMQVTAKTLSQ
HDELMKKTETMNVLMETNKMLREEKEKLEQELQDTQAKVRKMELDILPMQESNAELSEKS
GMLQAEKKLLEEDIKRWKARTQHLVSQQKDTDPEEYKRMHSEREAHLKRIQQLVEETSRF
KAEAARSGSSVTMLQSQVQNLRENLGKVMVERDNLKKDQEAKNVDIQEKLKTITQVKKIG
RRYKTQYEELKVKYDKSVADAASAPAQDQEAQQASVQEVQGLKESLNQSENRTRELEGHL
ENLNRTVGEREAEARSAQEQASRLQGEVMRLRQELQDKSSQEERLKQQLSDKEERTKKAI
VMAKQKISQLSGVKGQLQKENEELKQQKEELEVRVSALKSQYEGRLNRQERELRDLREQQ
ERHGEQRDEQPEQGSSKTQEPQRTTEQRQISLKSTPVAERGSASTSEPPTANIKPTPLAA
TPSKPPAIPGNKSTPRASIKPMITPAPVPTPTPTATVMPTTQVESQEPMQSSESPLEHMT
VYGSASGSVRSTSPNVQTNLAQPLLNVQQQSQATAFIQPTQQQTQPPAEPSNQEPPAAVM
HPTSQLDRPLSTSSGLWSATASTSTASAVTASPSSALSKRAREEEQESADTQSQDEPSDS
PICKRVRIHRVEEEMLAEDSTEAEGVVPGDNQEAPDAVQELESYATLEMMDVEPGPSQSV
PLDRLLPHSSDTHRSPEEPDHHVIVIVSDTESEGDHEDESEEEEEEEEEQDYEEEEDEEE
EEEEDDDEEDGGIGEEGEESNEESGSRDGNEVYEGDDTEGPDPTDPGTETEESIGATDST
QRMADSQSFETSTLEMFDAPVTSSAPRPPQSPRRPQHPLPPRLNILAQPSQELGPPAQVQ
RLPVRRQSVGRGLQLTSGMASSAQHFFEDDDRMVPSTPTLIPPRSDGFPEAIHSPQVAGV
SRFRFGPSDDLPQTSSSHSDLVQLPSQGMYDSSVFLGAHEEESGGRSVPTTPLQIAAPVT
ILSETLPSEANELASQSVPTVSTSTPGLSAPAGTSGMEERDDMLMDAGDSTEASLEAVSQ
TEAEEAAQTADESSLPSTSQEPSSSSADTSSSQPPKARTGFSRQWTSGRGSRSFVKRGGQ
GVMGVRGRFAR
NT seq
7056 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgtgttgcagcaaatattggagcggtcggagatatcgaaactccagaaaact
gtattgactaaattagagaagtacatttctgaccagcaatgtgaagtagattttctgaag
gcacaacaggagcaataccgtgtggatagtgaacaacaatattttgacatcgagaaaagg
ttcgctgaaagtcagtctcagtttgtgtcccagacccaagagcatcagatcctgaaacaa
gattactgcaaacttgaagaagagctgaaatccttacgagacaataataaggagcaagct
tcttcatacacaaaactagaatcacaacagaatgaactttctaaagccaaagatgagctt
gaggcagaaaaacgagagcttgtacggacattggaaagaagatcccaggagatggaacaa
caaagtgaggacctgaaacgtcttaatgatagattgttggaagtcaatgctgagaggatg
cagcttcaactaaaactggatgggtccgaagcctctgaggtctcaatcaagtataaagag
cagcgaatggagcaggagaaagatctacttcagggtcaagtaacctggctgaacaccgag
cttaaggctaaaagcgaagcgctgctgtctctttcccggcagagaggcaatgagatactg
gagctccaatgcaaccttaataacaaggaggatgagatcacccacctaaaagatcaggtg
accagtctgaaggcatccaatgagaaccttcagaagcaagcagaggagatgatcaccaag
atgagagaggcaaaagaacagcaagccagtttggaggagaagttcagtaatgaactcaat
gccaatatcaagctctcaaatttgtataagggagcagcagctgatgccgaggccaagggt
gaggagctcagcagagctgttgaggagcttcataagctacttaaagaggccggagaggcg
cacaaagctctggaagtgaagatggcagagctggagggtcgtaaagataaggaaatcact
gaactgaaagggaaaataagcagccaggagaaagagcttgaaaatgcaaatgagctgctg
tcagacaccaaacacagaggaactgcttcaattcttgcagaggagcatgtgacaacaatg
tcccccaccgcagctgcagttgctaaaatcaaaccaggcatgaaactcacagagatatat
acagcatatgtagagactcaagaacaactacaacgggagaaactagagaccaaacaactg
aacaagtacctggatgatattgtgcaggagatggaagcaaaggcacccatcttgaaaaga
aagagtgaggagtatgagcgcacgcaaaagtctgtttccagtctgtcttctaaactacag
caagctgtcatggaggtccaccgccgacagaaagaagcagatgaagtcaacaaacgtgca
tctgtgttggagagagataaccagaggtttgaggtgcagctggctgacatggctcaacag
gtgcgggtcctcctcattgagctggaggaagcacgtggtaaccatgtgatgcgtgaggag
gatgagatgtgttcagcagatgtaagcagcacttcggaggtgatttctcagcacctggtc
accttccgtggtattgaagagctgcaacagcagaaccagcgactcctagtggcactcaga
gacctcagcgaggctaaagagaaggatgagttggaggtagacaccatgaaacgcagtgag
gtggagaaatatctcgaggatcttcaacgtgaattggagcagctgaaggaaaagagagct
caggacctgcagaaggttgacgctgtggcacgacagagggacatgttccgcatgcttctg
acccaggccactggagtcacctttccacagggtgctgttgctgaggagcttattctaacc
tccactccccgccgttctccagccgtcacacctactgcaggcacccctacaggactggat
gccacggcgatagaatccactgagtcagtagaggccaaggctgcactgaagcagcttcag
gaaatctttgtggcctataagaaggaaaaaaatgagtctgaaaaggctctgactgagcaa
agtgagaaactgcaggatcaagtaactgaacttcgatctgaaaacaccaagatttccaca
cagctggaattcacctctaaacggtatgagatgctccaggataatgtggagggataccgt
aaggagattgcctctctgaatgagaagacccagaaacaggctgcagcaattcagctgagc
gaacagaccatacacaccctcacccaggaccggcgagcagcaaccgagaaactcaccatt
gctgagtctgaagcagcaaacctgcgtaaagagagagacatgctgaagatggtggagatc
agactgacccaggagaaagagatcttccaggcccaacagctcggccagaacatgctactg
accaacctcaaatcaatacaggcaactctagagcgctctgagactgagaccagacagcgg
ctgactgctcagattgagaagcaggagcgagagattgctcagctccagaaaagactcgag
aatgaggtggaacagaagcacttgctggcacgcaatcaagacatgcagctgatggatgct
aagaagaagctggagacacaaacagctcagcaccacaggacaagagaacagttgggtgct
gcccaacttgagcttaacaatctgaggcttcagatcagtagtggggagacccggctggtt
tccccgacagttcatacaggcctgcagggtggtgagggggacatggaggctctgcgtgcc
cagctgaagcaggctgagaacaaggtagaagagcttgaagagcgactgaagaacaccact
gacagtatggagcagtacaaagccattagccttagcctggaggaatccctggataaagag
aaacaggtaaccgagcaggtgcgttcatctgtggaaacccagatggaggaagctncagag
cagtataaacagctggagcagaaacttctggaaatggataaggtgaagcagagcttgcag
gaagagaaaaacaaagctgttgttgctgtggaacaagagctgagtgagctgaagaagtct
ttgagcagcctgcagtcagaacacaagagtgtccttgagagagcttctgttgctgctgca
caggagcagcaggccatcctggacagtcagcagcaggctaagatggcagctgaggcgcag
gataaatatgagagggaaatgttgttgcatgcggccaacgtggaagcactgcaggctgcc
aaagctcaggctctgcaggtgtctcttctcagacagcagctggaggagaaagttcagagc
accagcgcacagctgctggaggctcgtgtctcctgggaagagcaagaaaagattctcaag
gaggagcagtgtaagatagagtctcgctgtgaagatctgcaaaggcagaacacactcctc
catgagcagatacagactctgagtggacagatggccagtcagctacagagagccgccaat
gagagtcctctcaacgtctctctgactgaggagggcaagtctcaggatcaactcctggaa
atactcaggtttgtgcgacgggaaaaggagatcgcagagtctcggtttgaggtggtccag
ggggagagtctgaggcaccggctgagagtggagcatctggaaagagagctgaaggatgtt
caggagagtcttagtgcagagagagagaggatgcaggtgactgcaaagactctgtcccag
catgatgagctcatgaagaagacggagaccatgaatgtgctaatggagactaataagatg
ctgagggaggagaaagagaaactggagcaggagctgcaggatactcaagccaaggtgcgt
aaaatggagttggacatattgcctatgcaggagtccaatgcagagctcagtgagaagagt
ggtatgctacaggcagagaagaagcttctggaagaagacatcaaacgctggaaagctcgc
actcagcacctggtaagccagcagaaagacactgacccagaagagtacaagcgcatgcac
tctgagagggaagcacatctcaaacgcatccagcagcttgttgaggagactagccggttt
aaagctgaggctgccaggagtggtagctctgtgactatgctgcagtctcaggttcagaac
ctaagggaaaacctggggaaggtgatggtggagagggacaacctgaagaaagaccaggag
gccaaaaatgtggacatccaggagaaactaaaaaccatcacacaagttaaaaagattggt
cggcgttataaaacccagtatgaggagctcaaggttaaatatgacaagtcggtagccgat
gctgcatctgccccagcccaggatcaagaggcacaacaggcatcagttcaagaagttcag
ggcctcaaagagtccctcaaccaatcagagaacaggacaagagaactggaaggccatctg
gagaatctcaatcgaactgtaggtgagcgggaagcagaggcacgcagtgcacaggaacag
gcctctcgccttcagggggaggtaatgcgtcttagacaggagcttcaagataaatcttct
caggaggagcggctcaaacagcagctgagtgacaaggaggagaggaccaagaaggccata
gtaatggccaagcagaagatcagccagcttagtggtgtaaagggtcagcttcagaaagaa
aatgaggagttgaagcaacaaaaagaggaattggaagtacgagtgagtgcactaaagtct
cagtacgaggggcgtctgaacagacaggaaagggagctgcgagacctccgtgagcagcag
gagagacatggagaacagagagacgaacaaccagaacagggctccagcaagacccaggaa
cctcaaaggacaacagaacagcgacagatctctctcaagtccactccagtggcagaaaga
ggaagtgcaagcacttcagagcctccaactgctaatataaagcccacaccactggcggca
acccccagcaagcctccagccatcccaggaaacaaatccaccccaagggccagcatcaaa
cctatgatcactcctgccccagtgcccactcctacacccactgctacagtcatgcccacc
actcaggtggagagccaagagcccatgcagtcatctgagagcccgctagagcatatgact
gtctatggcagtgccagcggttcagtgcggtccaccagccctaatgttcagaccaacctg
gctcaacctctcctgaatgtccaacagcagagccaagccactgcgttcattcagcccact
caacaacaaacccaaccccctgctgaaccatccaatcaggaacctccagctgctgtaatg
cacccaacctcacaattagacaggcctctttctacatcctcggggctatggagtgccacc
gctagcacaagcactgccagtgcagtgaccgcgtctcctagtagtgccttgagtaaacgc
gcccgtgaagaggaacaagagtctgctgacacacagtcccaggatgagcccagtgactct
cccatttgcaagagggtccgaattcatagggtggaggaagagatgttggctgaggacagc
actgaggctgaaggcgttgtaccaggtgacaaccaggaggcccctgacgctgtacaggag
ttggagagctatgctactttggagatgatggatgtggaaccagggccatctcagtctgtg
cctttagatcgacttctgcctcattcctctgacacgcatcgaagcccggaggagcccgat
caccacgtcatagtcattgttagtgacacagagagtgagggagaccacgaagatgaatcg
gaggaggaagaagaggaggaggaagagcaggattatgaagaggaggaggatgaggaagag
gaggaggaagaggatgatgatgaggaggatggagggattggggaagagggagaagagagc
aacgaagagagcggcagcagagatggcaatgaggtctacgagggagacgacacagagggc
cccgatcccacagatccaggcactgagacggaggaaagtattggagcgacagactccacc
caacgcatggcagattctcagagctttgaaacaagcacattggagatgtttgatgcaccg
gtcaccagctctgctcctcgacctccacaatcacccaggagacctcaacatcctctgcca
cctcgacttaacatcttggcccaaccttctcaggagttgggacctcctgctcaagtccag
cgtctcccagttcgtcggcagtcagtgggacgaggacttcagcttacctctggaatggcc
agtagtgcacagcatttctttgaggacgatgacaggatggttcccagtacccctacactc
attcctccgcgttcggatggatttccggaagcaatccattctccacaggtcgcaggcgta
tcacgattccgattcggtccttcagatgacctcccgcagaccagctcctctcactctgac
cttgtccagctgccctcacaaggcatgtatgatagttctgttttccttggagctcatgag
gaggagtcagggggccgcagtgtccccacaaccccactacagatcgctgctcctgtgaca
attttatcagagactctgccatctgaagcaaatgagcttgcttctcagtctgtgcccaca
gtgagcacctccacaccaggcctcagcgctcctgcaggcactagtgggatggaggagaga
gacgacatgttaatggacgcaggagacagtactgaagcttcacttgaggctgtgtcacag
actgaggcagaggaagcagcccagacagcagatgagtctagtctgccttccacaagccag
gaaccttcatctagttctgcagacacaagcagctctcagcctcctaaagccagaacaggg
tttagcagacaatggactagtgggcgtggttctcggagttttgtaaagaggggtggacaa
ggtgtcatgggtgtgaggggtcgttttgccaggtga
DBGET
integrated database retrieval system
