Pimephales promelas (fathead minnow): 120493398
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Entry
120493398 CDS
T08155
Symbol
six1b
Name
(RefSeq) homeobox protein six1b
KO
K15614
homeobox protein SIX1
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprm03000
]
120493398 (six1b)
Transcription factors [BR:
pprm03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
120493398 (six1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SIX1_SD
Homeobox_KN
Homeodomain
HTH_3
YdaS_toxin
HTH_72
Phage_mat-A
Motif
Other DBs
NCBI-GeneID:
120493398
NCBI-ProteinID:
XP_039547914
LinkDB
All DBs
Position
Unknown
AA seq
284 aa
AA seq
DB search
MSMLPSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHR
GNFRELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRT
IWDGEETSYCFKEKSRGVLREWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR
AAEAKERENSENNNTGANKQNQLSPLDGGKSLMSSSEDEFSPPQSPDQNSVLLLQGNMSH
PGASAYSMTGLGAAQSVHGMQGHPHQLQDSLLGPLTSSLVDLGS
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatgctgccttctttcgggtttactcaggagcaagtcgcgtgtgtttgtgaggtg
ctgcaacaaggggggaaccttgagcgtctcggccgttttctgtggtctcttccggcctgc
gaccatctccacaagaacgagagcgtcctcaaagccaaggctgtagtcgcctttcatcgt
ggaaacttcagggaactttataagatactagagagtcaccagttctctccacacaaccac
ccgaagctgcagcagctgtggcttaaggcccattacgttgaggctgagaagctgaggggg
cgaccgctgggagcggtggggaaataccgagtgcgcaggaaatttcctctgccacgcaca
atatgggacggcgaggagaccagctactgttttaaggagaaatcccgcggtgtgctgcgg
gagtggtacacgcacaacccctatccatctcctcgggaaaagagggagttggctgaggcc
acagggctgaccaccacccaagttagcaactggtttaaaaacagacggcagagggatcgc
gcagcggaggcaaaagaaagggagaacagcgaaaacaacaacacgggcgcgaacaaacag
aaccagctttcaccgctggacggcgggaagtccctgatgtcaagctcggaggacgagttc
tcgcccccgcagagtcctgaccagaactccgtgctcctgctccagggtaatatgagccac
cccggcgcgtccgcgtattccatgaccggcctaggcgccgcgcagtcggtacacggcatg
caaggacacccacatcaactccaggattctttactgggacctttaacttcaagcctggtg
gacctcggttcttaa
DBGET
integrated database retrieval system
