Pimephales promelas (fathead minnow): 120493421
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Entry
120493421 CDS
T08155
Name
(RefSeq) denticleless protein homolog isoform X1
KO
K11790
denticleless
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pprm04121
]
120493421
Ubiquitin system [BR:
pprm04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
120493421
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_DCAF12
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_WDR19_1st
WD40_RFWD3
ANAPC4_WD40
Beta-prop_HPS5
Beta-prop_DCAF4
Beta-prop_SPT8
NBCH_WD40
WDR90_beta-prop_4th
PEP5_VPS11_N
MIOS_WD40
Beta-prop_WDR11_1st
DUF2844
TAF1C_beta-prop
VPS11_N
Motif
Other DBs
NCBI-GeneID:
120493421
NCBI-ProteinID:
XP_039547946
LinkDB
All DBs
Position
Unknown
AA seq
656 aa
AA seq
DB search
MTLFHHVVDRGVIKRRFNAGERRGYPLSSLLDGYQCARQDEHISYGASAAAVPPFGCTFS
SAPGQQNSLAVANEEGFVTIFNTREKKSSVLKEWQAHDNAVFDIAWVPGTNSLVTASGDQ
TARLWDVITADLLGTFKGHQCSLKSVAFSKQERAVFSTGGRDGNIMIWDTRCSKKDGFYR
QVKQISGAHMKPERYTPQNKKRRGMAPPVDSQQGVTVVLFCDENKLISSGAVDGIIKMWD
LRKNYTAYYHNPLPLQTYPYPGSCTRKLGYSGLSLDSTGSRLFSNCTDDNIYMFNISGLK
TTPVAVFSGHSNSSFYVKSSVSPDDQFLASGSSDHQAYIWKISDPKQAPMMLQGHSQEVT
SVAWCPTDFTKIASCSDDNTVRIWRLNRRPESENSSNRDANIVGWTLRKVQSPTRTPGRY
NPVELTPAKSPGSERVVSLASPQPASCAPTGADLPLPSNTSAPSAKLSSPKIPSIQQWVS
RSSSPGHQGTSPLRKVLTPVLQGPSSERRAKRRLETGDCASSGLGGEGEGVSELYPDVKR
SRSSVSAENCSEEKGELFSLKTDERLCSTGQAGAGKENSSPRRNDWLSVISQRFKGSTQP
KSPNGSSKRQDARTHSAPAAISPRPMTVISPTPNKKASPSRPMKKISSYFMKRTQD
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgactctttttcaccatgttgttgatcgaggagttataaaaagacggttcaatgcaggc
gagcgtcgaggctatccgctgtcctctctgctggacgggtatcagtgcgcgcgacaggac
gaacacatttcatatggagcctcggctgctgctgtcccgccgtttgggtgcacgttttcc
tctgctcctggtcaacagaacagccttgctgttgcaaatgaagaagggtttgtgaccatc
ttcaataccagagaaaaaaagagctcggtcctgaaagagtggcaggcacatgataatgct
gtttttgatatagcctgggttcctggtacaaacagcttggtaaccgcctctggtgaccaa
accgcccgtctgtgggatgttatcactgctgacctgctgggaacttttaaaggacatcaa
tgcagtcttaaatcggttgctttttccaagcaagagagagctgtgtttagcactggaggc
agagatgggaatatcatgatttgggatacaagatgcagtaaaaaagatggtttctacagg
caagtaaaacagatcagtggtgcccatatgaaacctgaaagatatacacctcaaaacaag
aagaggcgtgggatggcgccccctgtggactcccagcagggtgtgacagtggttctgttc
tgcgacgagaacaagctcatctcctcgggagcagtcgacgggatcattaaaatgtgggat
ttacggaagaactacactgcgtactaccacaaccccctccctctacagacctatccctac
ccaggctcctgcacacgcaaactaggatattctggactgtcactggactctactggctcc
agactgttctccaactgcacagatgacaatatctacatgttcaatatcagtggattgaaa
accactccagttgctgtgttcagtggccacagtaactcctcattttatgtgaagtccagt
gtcagcccagatgaccagttcctggccagtggttcgagcgaccatcaagcttacatatgg
aagatttcagacccaaaacaagctcccatgatgcttcagggccatagtcaggaagtcaca
tcagtggcctggtgccccaccgatttcaccaagatcgcttcctgttctgatgacaacacc
gttaggatttggcgcctgaaccgcagaccagagagcgaaaactcatcgaaccgagacgca
aacattgtaggctggacacttcgtaaagtccagtcaccaaccagaacacctggccgttac
aaccccgttgagctcactccagccaaaagtcctggttcagagagggtggtttctctggct
tcaccccagcctgcttcttgtgctcctacgggtgccgatttacccctcccatcaaacacc
tctgcaccttcagccaagctcagcagccccaaaatcccctctatccagcagtgggtcagc
cgcagcagctccccgggtcaccagggcacgtctcctctccgtaaggtgctcacgccagtc
ctccagggcccttcatcagagcgccgtgcaaagcgacggctagagacgggtgattgcgct
agctctggtttgggaggggagggtgaaggggtgtctgaattgtatcccgacgttaagcgg
agcaggagttcggtgagcgcagagaactgttctgaggagaaaggtgaactattcagtttg
aaaacagatgagaggctctgctcgactggtcaagccggcgctggcaaggagaacagctct
ccgagaaggaatgattggctgtcggttatcagtcagagatttaaaggatcgactcaaccc
aaaagcccaaacggcagcagcaaacggcaagatgcaagaacacacagcgctccagcagca
atatcaccgcgtcccatgacggtcatctctccaacaccaaacaagaaagcatcaccctcc
agacccatgaaaaaaatctcaagctacttcatgaaaagaacccaagactaa
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integrated database retrieval system
