Pimephales promelas (fathead minnow): 120493461 Help Entry 120493461         CDS       T08155                                  Symbol sf3b3 Name (RefSeq) splicing factor 3B subunit 3   KO K12830   splicing factor 3B subunit 3 Organism pprm  Pimephales promelas (fathead minnow) Pathway pprm03040   Spliceosome Brite KEGG Orthology (KO) [BR:pprm00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     120493461 (sf3b3)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:pprm03021]     120493461 (sf3b3)    03041 Spliceosome [BR:pprm03041]     120493461 (sf3b3)    03036 Chromosome and associated proteins [BR:pprm03036]     120493461 (sf3b3) Transcription machinery [BR:pprm03021]  Eukaryotic type   RNA polymerase II system    Coactivators     SAGA/TFTC/STAGA complex      120493461 (sf3b3) Spliceosome [BR:pprm03041]  Complex A   U2 snRNP components    U2 snRNP specific factors     120493461 (sf3b3)  Complex B     120493461 (sf3b3)  Complex C    U2 SnRNP specific factors     120493461 (sf3b3) Chromosome and associated proteins [BR:pprm03036]  Eukaryotic type   Histone modification proteins    HAT complexes     STAGA complex      120493461 (sf3b3)     TFTC complex      120493461 (sf3b3) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Beta-prop_RSE1_1st Beta-prop_RSE1_2nd CPSF_A Motif Other DBs NCBI-GeneID:  120493461 NCBI-ProteinID:  XP_039548000 LinkDB All DBs Position Unknown AA seq 1217 aa AA seqDB search MFLYNLTLQRATGISHAIHGNFSGTKQQEIVVSRGKILELLRPDANTGKVHTLLTMEVFG VIRSLMAFRLTGGTKDYVVVGSDSGRIVILEYHPSKNMFEKIHQETFGKSGCRRIVPGQF LAVDPKGRAVMIGATEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEALEEHGNFLITVPG GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF FLAQTEQGDIFKVTLETDEEMVTEIRMKYFDTIPVATAMCVLKTGFLFVSSEFGNHYLYQ IAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDEQENLSPIMSCQIADLANEDT PQLYVACGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHVEDEFDAYIIVSFVN ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGEDALVQVYPDGIRHIRADKRVNEWKTPG KKTIVRCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ RSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGVEKQDELGEKGTI GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSW LSYSYQSRFHLTPLSYETLEYASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFP LQYTPRKFVIHPETNNLILIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAA AFLNENLPEAIFGAPKAGSGQWASLVRMINPIQGNTLDLVQLEQNEAAFSVAICRFSGGG DDWYVLVGVARDMILNPRSVGGGYIYTYRLTGGGDKLEFLHKTPVEDVPLAIAPFQGRVL IGVGKLLRIYDLGKKKLLRKCENKHVPNLVTGIHTIGQRVIVSDVQESLFWVRYRRNENQ LIIFADDTYPRWVTTACLLDYDTMAAADKFGNICVVRLPPNTSDDVDEDPTGNKALWDRG LLNGASQKAEVIINYHIGETLLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDF FQHLEMHMRSEFPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMDPHKQKSVSEELDRT PPEVSKKLEDIRTRYAF NT seq 3654 nt NT seq  +upstreamnt  +downstreamnt atgtttctgtacaacctgaccctgcagcgggcaactggcatctcccatgccatccatggc aacttctcaggaactaaacagcaggagattgttgtttcccgtgggaaaatcctggaactg ctgcgtcctgatgccaacacagggaaggtccacactctgcttactatggaggtgtttggt gtaatccggtccctcatggccttcaggctaacaggtggaactaaagactatgttgtggtg gggagtgactctggacgtattgtgatcctggagtaccatccctccaagaacatgtttgaa aagatccaccaggagacgtttggcaagagtggctgcagacgtatcgtgcctgggcagttc ctcgctgtggacccaaaaggcagagctgttatgataggtgccacagaaaagcagaagttg gtatacatcctgaacagagatgcagctgcccgccttaccatctcctcccctctagaggcc cataaggctaatacacttgtctaccatgtggttggtgtggacgtgggctttgagaacccc atgtttgcctgcctggagatggactatgaggaggcagataatgatcccaccggagaagct gcggcaaacacacagcagactctgaccttttatgagttggacttgggcctcaaccatgtc gttcgcaagtacagtgaggcactggaagaacacggcaacttcctcatcacagttccggga ggttcggatggtcccagcggtgtgctcatttgctctgagaactatatcacctacaaaaac tttggtgaccagccggacatccgttgcccaatcccacgcaggaggaatgacctggacgat cctgagagaggcatgatctttgtctgctctgctacccacaagaccaaatccatgtttttc tttctagcccagacagaacaaggtgacatcttcaaggttacactggaaactgatgaggag atggtgaccgagatcaggatgaagtatttcgataccattccagtggccacagccatgtgt gttttgaagactggcttcttgtttgtttcttcagaatttggaaaccactacctgtatcag attgcccacttgggtgatgatgatgaggaacctgagttttcttctgctatgcctctggag gaaggagacacattcttttttcaaccacgtccccttaagaaccttgtgctagtggacgag caagaaaatctttcccccatcatgtcctgccagattgctgatttggctaatgaagatacc ccgcagctgtatgtggcatgtggcagaggaccccgatctacactgagagttttgagacat ggactggaggtgtcagaaatggcggtttctgaactgcctggtaaccctaatgctgtgtgg actgtcaggagacatgtagaagatgagtttgatgcctacatcattgtgtctttcgttaat gccaccctggtgctttctattggagagactgtggaagaagtaacagactctggcttcttg ggcacaacacctaccctgtcctgctcgttacttggggaagatgcacttgtgcaagtctat cccgatgggatccgtcacatccgtgcggataagagagtgaatgaatggaagactccaggg aagaaaacaattgtccgatgtgctgtcaatcagaggcaggtggtcattgctttgaccgga ggagaactggtctactttgagatggacccgtccgggcagctaaatgaatacaccgaaagg aaggagatgtctgcagatgtggtgtgcatgagtttggcaaatgtgccacctggtgaacag cgttctcgtttcttggcagttggattggtggacaatactgttcgtatcatctccttggat ccatctgactgtctgcagccattgagtatgcaggctcttcccgcccagccggagtctctt tgtattgtggagatgggtggagttgaaaaacaagatgaattaggagaaaagggcaccatc ggcttcctatacctcaacattggcctgcagaacggagtgttactgcgtactgttttggat ccagtgaccggggacctgtctgatactcgaactcggtatctcggctctcgtcccgtcaag cttttcagagtccggatgcagggccaagaagctgttctggccatgtccagtcgttcctgg ctgagttactcataccagtctcgtttccacctgacccccctgtcttatgaaaccttagag tatgcatcaggcttcgcttctgaacagtgtcctgagggtattgtcgccatttccaccaac acactgagaattttagctcttgagaaactgggtgccgtcttcaaccaggtggcattccca ctgcagtatacacctcgcaagtttgtcatccacccagaaacgaacaacctgatcctgatt gagacggaccacaatgcctacactgaagctaccaaagcccagcgcaagcagcagatggct gaggaaatggtggaggcagcgggggaagatgagcgagagctagctgcagaaatggcagca gctttcttgaatgagaacctgccagaagccatctttggggcacctaaagcaggttctggg cagtgggcttctctagtacgcatgatcaaccccatccagggcaatacactggatctggtg cagctggagcagaacgaggcagctttcagtgtggccatatgccgcttttccggtggaggc gatgactggtatgtgttagtgggcgttgccagagatatgatactaaatccacgctccgtt ggtggaggatatatttatacttatcggctaactggaggtggggacaagctggagttttta cacaagacacctgtggaggatgtacccctggctatcgctccctttcagggacgagtgttg attggagtgggcaaactcttgcgcatctatgacttgggaaagaagaaacttctccgcaag tgtgaaaacaagcatgttcctaacttggtgactggcatccacactattgggcagcgtgtg attgtgtctgatgttcaggagagtctattctgggtgcgctacaggcgcaacgagaaccag ctcatcatctttgctgacgatacatatcctcgttgggtcacaaccgcctgcctgctcgat tatgacaccatggctgctgcggataagtttggaaatatttgtgttgttcgcctgcccccc aataccagcgatgatgttgatgaggaccccacagggaacaaggcattatgggacagaggc ttgctcaatggagcatcacaaaaggctgaggtgattattaactatcacataggagagact ttgctgtccctccagaaaaccaccctcatccctggaggatcagagtctctggtgtacacc acgctatcgggaggcattggcatcctggtgccgttcacctctcacgaggatcatgacttc ttccagcacttggagatgcacatgcgctctgagtttccccctctgtgtggtcgtgatcat ctcagcttccgctcatattatttcccagtgaagaatgtgatcgatggagacctgtgtgag cagtttaactccatggacccccataagcagaagagtgtctctgaggagttggaccgcacc cctccggaggtgtcgaagaaattggaagacatcagaacacgctatgccttctag

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