Pimephales promelas (fathead minnow): 120493480
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Entry
120493480 CDS
T08155
Symbol
dennd4a
Name
(RefSeq) C-myc promoter-binding protein isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pprm04131
]
120493480 (dennd4a)
Membrane trafficking [BR:
pprm04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
120493480 (dennd4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
PPR_3
PPR
PPR_long
Motif
Other DBs
NCBI-GeneID:
120493480
NCBI-ProteinID:
XP_039548039
LinkDB
All DBs
Position
Unknown
AA seq
1717 aa
AA seq
DB search
MGMKMEEKSLRVADYFVVAGLTDSSKPLDEYVHPEDGGHRSSAQLKAPITDVTVVIRSLG
EEVPRGFTCVECSPSGLSAELNGGSLMGPQIFLCYRRGRDKPPLTDLGVLYEWKEKLKPD
CQIIQTTPSGRPANISSSSSQRIYITYRRASENHSNSTLAVTDICVIIPGKGETPPHAFC
KVDKNLNSSMWGSSVYMCYKKSLAKTNTLAFTAGLLSRYPEEDYDSFPLPESVPLFCLPM
GVSIECWPSHTKYSLPVFSTFVLTGASGEKVYGAAIQFYEPYPEERLTEKQRSQLGLQAN
GLRPDGSMTVHTNKSICLLSHWPFFDAFRNFLTFLYRYSISGPHTLPIEKHISHFMHKVP
FPSSQRPRILVQLSPHDSLMLSQPVSSPLPLSGGRLSTLLLNLGPKNAVTLLVLAVTEHK
ILVHSLRPAVLTSVTEALVSMIFPFHWPCPYIPLCPLALADVLSAPCPFIVGVDSRYFDL
YEPPTDISCVDLDTNTITQKEERRSLTWKILPRKACKHLINTLSNLHQQLDEGYQLSREE
GQMEAFMTEREPGSGGKSLETLELEIQEAFLRFMAAILKGYRSYLLPITQAPSEKATDAS
SLFDLQGFLKSRDRSHQKFYSLMTKTQMFIRFIEECSFVSDKDASLAFFDDCVDKLFGTE
KGGKVDSDKPEDTRLIELDKSHRSEHTVYITPPELPALPEGEEPPMVHSYSGFPVLNTQL
CELQDGPRVPKATSAMRHISPISPAAIFRRSQQEIKSAQRMAKTYSSIPQMWSKCLLRHC
HGLWFICLPAYVSACHSKVRVLHTAYDVLRNIQDKKLQPPDEVCYRVLMQLCGQYGQPVL
AVRVLFEMKKAGVQPNAITYGYYNRAVLESTWPSSTRGGYFLWGKLRNVVRGVVLFKQVW
RRQTTQQKDTHLSDASDLDSVSHGSLDSSNDSAERASIDTDFTKMDSSDDRSSTGGQSDQ
GYDSLSKEEVRLGGGEEQNSSPDMKEKKDRNSCSMSQTVLSKIEDSSLLVRTHPSATNGE
TSHFLSEALPKTKRPNSLDIFGEKPVRPRTLDLTPNKMVEGLCTESVEALIETEAVGGVV
SPSKVAVERTASCMVAMEKSVAMEREHIGVERSVSCSGALGRVVKRTGIEAGFDPLSLMV
AETNVHRDNADTPTARRDLAEEIHHYMNNMSSPLSQRSLSVDLKGHQTPSPHSSPCSSQL
QPQPRTRLFSSPSLPQGRVRRVREPRPTSLASPSSPTPSSFSMDSLLTPTLDVFKSSFLS
AGKGVAEKASRLYSRLSSQTSIAQDLNSDRVSVSSLGSGDPDCSSLMESDSCVDPEGLSS
PQRDAIQPVMRPKRSPYRSGHCLESPSAAPRLFRQSSLTGPSLTITKALQTSDVCSDSSF
TQSTQNYAIEVRMSSCSHCNTCESLVYDEEIMAGWTADDSNLNSTCPFCGSPFLPLLNVE
IRNLGDQERSPSQDTHTCQTDTEDEVPQVYDVTGNLSCNGKKDPEPVTVPYLSPLVLWKE
LESLLENEGDQAISSAAIVDHHPIVFWNLVWCFRRLDLPSSLPGLYLSSKHYSKVAQPLQ
SFASEDSKNVLVQILWDNPRLHQDPIQPCYLLWKSYCANPAGSAALWEEEQAVSLELLQG
VVKSIQRNDVYQPMSQILQILGTRLGFKRQRSLYRDILFLSLVALGKSSISIDAFDREYK
MAYDRLTPSQVKMTHNCDRPPSAGVMECRRTFGLPNL
NT seq
5154 nt
NT seq
+upstream
nt +downstream
nt
atggggatgaaaatggaggagaaaagccttcgtgtagcagactactttgttgtggcagga
ctcaccgactcctctaagcctcttgatgaatatgtccacccggaagatggtggtcaccgg
agctcagcacagctcaaggcacccatcactgatgtgacggtggtgattcgctcactaggt
gaagaggtacctcgaggctttacctgtgtggaatgctccccctctggactctctgccgaa
ctgaatggaggaagtctcatggggccgcagatcttcctctgctacaggagaggcagagac
aaaccgccactcacagacctgggcgtcctttatgagtggaaggagaaattgaagccggac
tgtcaaataatacagaccacgccctctggccgccccgccaatatcagtagctcctcttct
caaaggatctacatcacatatcggcgtgcctctgaaaatcactctaactccacactggct
gtcacagacatctgtgtcattattcctggcaagggagagacaccaccacatgctttctgc
aaagtggacaagaacctcaacagcagtatgtggggatcctctgtgtacatgtgctacaaa
aaatctttggccaaaaccaacacacttgcattcacagcaggtcttttgtccagatatcca
gaggaggactacgattcctttcctttgcccgaatccgtgcccctattttgcctaccgatg
ggagtgtccattgagtgctggccctctcataccaaatactctcttcccgtcttttcaaca
ttcgttctcacaggcgcctctggagaaaaggtttatggtgccgccatacagttttatgag
ccctatccagaagagcgtttgactgagaagcagcgatctcagctcggcctgcaggctaac
ggactcaggcccgatggatccatgactgtccacaccaacaaaagcatctgccttctctct
cactggcccttttttgatgctttccgtaacttcctgaccttcctctacagatactccatc
tcaggtccacacactcttcccattgagaagcatatttcccatttcatgcacaaggttcct
tttccttcctctcaaaggccacggatcctggtgcagctgtctccacatgatagcctgatg
ctgagccagcctgtttcctctccgctccctctgagtggcggaaggctctccacactactg
ttgaacctcggcccgaagaatgcagtgaccctgcttgtgttagctgtgactgaacacaag
atcctggtgcactccttacgtccggccgttcttaccagcgtcaccgaggccctggtatcg
atgatttttcccttccactggccatgtccatacattcctctctgcccgctggccctggca
gatgtgctcagtgctccatgtcctttcatcgtaggggtggattcgcggtactttgacctc
tatgagccaccgacggacataagctgtgtggatctggacaccaacactataactcaaaaa
gaagagcgcagatccctgacctggaagatcctgccaagaaaagcctgtaaacatttgatc
aacaccctcagcaatctccaccagcaactggatgagggttatcagctaagccgtgaggaa
ggacagatggaggccttcatgaccgagcgagaacctggcagtggtgggaagagtctggaa
accttggagctggagatccaggaggcttttctgcgctttatggctgccatcttgaagggc
taccgctcgtacctgttgcccatcactcaagctccgtctgagaaagcaactgacgccagt
tcactctttgatttgcaaggctttttgaagagtcgtgatcgatcacaccaaaagttttac
tccctcatgaccaagactcagatgttcattcgtttcatcgaagagtgctcttttgtcagc
gataaggatgcgagccttgctttctttgatgactgtgttgacaagttgttcggcacagag
aaaggagggaaggtggacagcgataagccagaggacacaaggcttattgaacttgacaaa
tcccaccgtagcgagcacacggtctacatcaccccaccagagctgccggcacttccagag
ggagaggagccacctatggttcatagctacagtgggttccctgtactgaacacccaactc
tgtgagcttcaggatggtcccagagtccccaaagcaacatcagccatgagacacatcagt
cccatcagcccagctgctattttcaggcgctcccaacaggagatcaaatcagcccagagg
atggctaagacgtactcctccatcccacagatgtggtccaagtgtcttctcaggcattgt
cacggtctgtggttcatctgcttgcccgcgtatgtcagtgcctgtcactctaaggtgcgt
gtgctgcatactgcctacgacgtgctgagaaatatccaggacaaaaagttgcagccccct
gatgaggtgtgttaccgggtcctgatgcagctgtgtgggcagtatggacagcctgttctg
gctgtccgggttctttttgagatgaagaaagccggagtgcagcctaatgccataacctat
ggatactacaacagggccgttctggagagcacatggccttcctcaaccagagggggatac
ttcctgtggggaaagttgagaaatgtggttcggggtgtggtgctgttcaaacaagtatgg
aggaggcagaccacccaacagaaagacacccatctctctgatgccagtgatctcgacagt
gtcagccatggcagtctggacagctctaacgattctgcagagcgagcttccattgatact
gacttcactaaaatggattccagtgatgacagatccagcacaggtggtcagtctgatcag
ggctatgactctctgtctaaagaggaggtgaggttaggaggaggtgaggagcagaactca
tctccagacatgaaagagaagaaggacagaaactcttgctcaatgtctcagactgtcctt
tcaaagatcgaggattcatcccttctggttagaacccatccatctgcaaccaatggtgaa
accagtcatttcctttctgaagccctcccaaagacaaaaaggccaaactccctggatatt
ttcggagaaaagcctgtaaggcccagaacactggatctaaccccgaataagatggtagaa
ggactctgtactgaatctgttgaagcactgatagaaacggaagcagtggggggcgttgtg
agcccatctaaagttgccgtggagaggactgctagctgcatggttgccatggaaaagagt
gttgccatggagagggagcacatcggcgtggagaggagcgtgagctgcagcggcgctctt
ggtcgagtggttaagaggacgggtattgaagcagggtttgatcctctgtccctcatggtg
gctgagactaacgtccacagggataatgcggacacccccaccgcccgccgagacctggct
gaggagattcatcactacatgaacaacatgagtagcccgttaagccagcggtctctcagt
gtggacctcaaggggcaccagaccccgtccccacacagctctccctgctcctctcagctc
caacctcagccacgaacacgactcttctcctcgccttcccttcctcagggacgagtgcga
agggtcagggagccgcggcccacctccctggcctccccttcctcacctactccctcctct
ttctccatggactctctgctcaccccgaccctggacgtgttcaagagcagcttcctctct
gctgggaagggcgtcgctgagaaagccagccgactgtattcacggctttcctcccagacg
tccattgcacaggatttaaactctgaccgggtcagtgtgtcttcactggggtcaggtgac
cctgattgctcctctctgatggagagtgactcctgtgtagatcctgaggggctctcttcc
ccccagcgtgatgccattcagcccgtcatgcgtcccaaaagaagcccttacaggagcggc
cactgcctagaaagcccatccgcagcacctcgactcttccgccagtcctcgctcactggt
ccatcactgactataacgaaagctctgcagacctcagacgtgtgttcagattccagcttc
actcagtccacgcagaattacgccattgaagtacgtatgtccagttgttcacactgtaac
acctgtgagagtttggtgtatgatgaagagatcatggctggttggacagctgacgactcc
aacctcaatagcacgtgccctttttgtggctctccatttctgcccctgctcaatgtggaa
atcagaaacctgggtgaccaggaaagatccccctctcaagacacacatacttgccagaca
gacactgaagatgaagttccacaagtttatgatgtcactggcaatctatcctgcaatggc
aaaaaagacccggagccagtcaccgttccctacctgagtcctctggtgctttggaaagaa
ctggagagcttgctggaaaacgagggagatcaggccatctcatctgcagctattgtggat
catcaccccattgtgttctggaatctggtgtggtgtttccgtaggctggacctgcccagc
agcctgcccggactctatctgagctccaaacactacagcaaagttgctcagcctctgcaa
agttttgcatcagaagacagtaaaaatgtcttggtccagatcctgtgggacaaccccaga
ctgcatcaggaccccattcagccctgctacttgctctggaaatcatattgtgcaaatcct
gcgggatctgccgccctgtgggaggaggagcaggctgtgagcttagagctgctgcagggg
gtcgtgaagagcatccagaggaacgatgtctatcagcccatgagtcagatactgcagata
ctgggcaccagattgggcttcaaaaggcaacggagcttatatagagacatcctgttcctg
tctttagtggctttgggcaagagtagcataagtatcgatgccttcgaccgtgaatacaaa
atggcatatgaccgtttgacacccagccaggtcaaaatgacccacaattgtgaccggcca
cccagcgctggagtcatggagtgcaggagaacatttgggctgcccaatctgtga
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integrated database retrieval system
