Pimephales promelas (fathead minnow): 120493482
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Entry
120493482 CDS
T08155
Symbol
slc24a1
Name
(RefSeq) sodium/potassium/calcium exchanger 1 isoform X1
KO
K13749
solute carrier family 24 (sodium/potassium/calcium exchanger), member 1
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
120493482 (slc24a1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pprm02000
]
120493482 (slc24a1)
Transporters [BR:
pprm02000
]
Solute carrier family (SLC)
SLC24: Na+/(Ca2+-K+) exchanger
120493482 (slc24a1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Na_Ca_ex
BUD22
Cwf_Cwc_15
HAM1_N
PPP4R2
Motif
Other DBs
NCBI-GeneID:
120493482
NCBI-ProteinID:
XP_039548044
LinkDB
All DBs
Position
Unknown
AA seq
732 aa
AA seq
DB search
MFLTRRKRLQLSRIIFLLSGVFLCSLYQLTIRARLPDPWPEPQRAGDLEDGSGLALDAGL
LEMPEVVTNLTNVEPKSTDHTDVAQPSETATDRPIQTTSTTEEPTTTANRTIVHCIYVDP
NLPKPTPVPTPETDTTTLVPNTTASSPGEAPHMKGEYPVDIFSIEDRRRGWVSLHIFGMI
YMFVSLAIVCDEFFVPTLGVITDKLAISDDVAGATFMAAGGSAPELFTSLIGVFISHSNV
GIGTIVGSAVFNILFVIGMCALFSREMLYLTWWPLFRDVSFYIVDLIMLIIFFLDNTIMW
WESMMLVSGYALYVIFMKYNVQIERAFKYQLMKHKNIVKVIAVEEPEKDNGTSAEENRPP
KPEDTDRLKLKPTLQRGGSSASLHNSTMRNTIFQLMIHTLDPLGEESVFNGDAKARSSLG
CKVKFKDKAQILNDMARGKVENKKKEKSGEGEGQTEQQPKEDAAPGAKEEDAGQKPEAQK
EGDAAAEGGSEKPGGSDDSEDDEEDDSDEESDEDSDDDDDEDEEEGEEPLSLEWPDTRRK
QATYLFLLPIVFPLWLTVPDVRNPASKKFFVITFLGSIVWIAIFSYLMVWWAHQVGETIG
ISEEIMGLTILAAGTSIPDLITSVIVARKGLGDMAVSSSVGSNIFDITMGLPVPWLMYSL
YHSFAPVTVSSNGLFCAIVLLFLMLLFVIISIAACKWRMNKVLGFTMFILYFVFLVLSVM
LEDRIIVCPVSI
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgttcctgactcgaagaaagagacttcagctcagccggattatatttcttctgtctggg
gttttcctttgttctttatatcaactcactatcagagccagacttccagacccctggccc
gagccccagagagcaggagacctcgaagatggctccggacttgctctggatgcaggactg
ttggagatgccagaggttgtgactaatttgaccaatgttgagccaaagagcaccgaccac
acagatgtggcccagccgtcagagacagcaacagatagacccatccaaacaacgtctaca
acagaggagcctacaacaaccgcaaacaggacaattgtccactgcatttatgtggatcct
aaccttccaaaacccaccccggttcccactccagaaaccgatacgaccactctggtgccc
aacactacagcatccagccctggagaagcaccacacatgaagggcgagtacccggtggac
atcttctccattgaggatcgacgcagaggctgggtctcgctccacatctttggaatgata
tacatgtttgtttctttggccattgtctgcgatgagtttttcgtccctacgttgggggtc
atcacagacaaactggccatctcagacgatgtggccggggcgacctttatggccgctgga
ggctctgctcccgaacttttcacttccttgatcggtgtcttcatttctcatagcaacgtg
ggcattggaaccattgttggctcggctgtctttaacatcctatttgtgatcggaatgtgt
gcgctgttttcccgggagatgctttacctcacctggtggcctctctttcgggacgtgtcg
ttctacatcgtcgatctcatcatgctcatcatcttcttcttggacaacaccattatgtgg
tgggagagtatgatgctggtgagcggttatgctctctatgttattttcatgaagtacaat
gttcagatagagcgcgcctttaaatatcagctcatgaaacacaagaacattgtgaaagtc
atcgcggtggaagaacctgagaaggacaacgggacttcggctgaagagaacaggccgcct
aaaccagaagacacggatcgactaaagctgaagcccactttgcagcgcgggggcagttct
gcctctctgcacaacagcaccatgaggaacaccatcttccaactgatgattcacacactg
gatcctcttggtgaggagtcagtgtttaatggagatgcaaaggctagaagctctttggga
tgtaaagtgaaatttaaagacaaggctcagattttgaacgacatggcccgggggaaggta
gaaaacaaaaagaaggaaaaatctggtgaaggtgaaggtcaaacggagcagcagcccaag
gaagacgcggctccaggagccaaggaagaagacgccggtcaaaagcctgaggcacaaaag
gaaggagacgccgcagcagaaggaggctcagagaagccaggaggttcagatgattcagag
gatgatgaggaagatgacagtgatgaagagagcgatgaagacagtgatgatgacgatgat
gaagatgaggaagaaggagaagaacctctgtccttagagtggccagacaccagacgcaaa
caggccacatatttgtttctattgcccattgtctttccactgtggctgacagttccagat
gtcagaaaccctgcatccaagaagttctttgtcattaccttccttggctcaatagtatgg
attgctatattttcctatctcatggtgtggtgggcacatcaggtgggtgagacaattggc
atatctgaggagatcatgggtcttaccattctggctgcaggaacatcaattcctgatcta
atcaccagtgtgattgtggctcgaaaaggcttgggagacatggctgtctccagctctgta
ggcagcaacatatttgacatcaccatgggactgccggtgccatggctgatgtactcgctc
taccattcctttgccccagtgactgtgagtagtaatgggctattctgtgccattgtactg
ctcttcctcatgctcctcttcgtcattatctccatcgctgcctgtaagtggaggatgaat
aaagtgttgggattcaccatgttcatcctgtactttgtattcctggtgctcagtgtcatg
ctagaagatcgaatcattgtatgtcccgtgtccatctga
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