Pimephales promelas (fathead minnow): 120493671
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Entry
120493671 CDS
T08155
Symbol
tdrd6
Name
(RefSeq) tudor domain-containing 6 isoform X1
KO
K18405
tudor domain-containing protein 1/4/6/7
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pprm03036
]
120493671 (tdrd6)
Chromosome and associated proteins [BR:
pprm03036
]
Eukaryotic type
Gene silencing
piRNA pathway
120493671 (tdrd6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TUDOR
SGF29_Tudor
Motif
Other DBs
NCBI-GeneID:
120493671
NCBI-ProteinID:
XP_039548347
LinkDB
All DBs
Position
Unknown
AA seq
2231 aa
AA seq
DB search
MCSIPGLPSTGSNVPVLITRVNLNPSCVLVEFWGNFDQDRKFAYQQLKKEIQYPRESFSE
SDGNPGDLCLVQVYETWYRARIVSRDTEEYSVFLIDEGRTLCATVNTLAWGKSDFFYLPP
EVEFCVLSNVLPLSPENKWSAMAFEFMKTFCGRRVNALVQDVLVPHRTFLLDIPCLSRQM
FEMGFAKKLSSDRFKDFVARSLQTNNGTGEPQRISSIRPKPVESIEQMEKQQAYMYPELQ
TDTVETVMVTEVTSPFRIFCQLKVFSQELKKLTEQITRHYEGRVGRNFARPENLGSPCAS
RGSDGKWYRSVLQQVMSANNVVEVLQVDYGKKQFVQVENVRPLAPEFFRMPVVTYVCSLH
GIVDRGVGWTASQIDYLKSLLLNRTVIAKFQYQSLSEGVHYVMLYGEENTNINKLFELKQ
KCSLDSEMTLADFAVQKSPSQNSKILETTETYSGETYSDLKGNKPVFFTESLAPNTSHLA
VVQHVDSPGKFWVQTQNYADEFDQLMNDLGNLYINPTSAEGLIRKPVVGLLCAAKAQDGV
FYRAAVSKVIDKKAEVYFLDYGNTELVDCFNLRQLPLRFQQLPAVAVKCSLHGIKSRLKH
WDERATLFFSKLVEDKKLELHVQDKHQDTHMVQLVDPSLDGENDVNKLLCKANFADSEKS
IVDSSVVRSCGFKITNTSGIFYTDTQPQTPSSSSAVVESASVFKEYLFPIGSSLEVTVSY
IESPNDFWCQKAQNAACLEVLMQDIQRFYAHSEFQPPLEAACVARHPETGIWYRALVIQK
HQTPHVEVLFVDYGQTKKVAIEDLRKINPAFLKMKGQAFRCSLYNLIHPVSHSALDWSPE
ATLQFQEFVDTAASMNVPLKCTIFAVMYDSQKVVFNVVDLETPFQSICNLLVQRRLADRA
PSKRAPLPPFRLDTYYYSTHGVKTGCEEEVTVTCVKSVTQFFCHLARNSDEIEKLASKVN
SLCRQLELTKCPQTFGTVCFAKYTDGLWYRGQIKSSKPSVVINFVDYGDTLEVEKSDLLP
VPIEAGEIMSVPVQAIECGLSDMPENVPDAVENWFQNFADSHCFTALIVAKEPAGKLMVE
LYEGKTKVNALIRQKFHNEIHTIEPSPLKGYSSKNRAQVQAESFGKESSSGLKRDRTDQV
QQSRESHAAQRGNIESKQPQSKWGFHTDGRPEPTRDFGTIHNSQRQNEPQRKSNDRADAR
HPCASVKTDDVKPKSQALLRESALPGKLIKPGIEAEVFISHCNSPCSFFVQFAADEDDIY
SLVEKLNADQSRCANIDSSEIHEGDLVCAMFPDDNSWYRAAVRKNTDKIDVEFVDFGNTA
VISASKICRLDQSFASFPRYSIHCSVHKLDVDGVDQEIAPNFKQVIDQNIEKVMCTFVKM
SGTVWEVKLNVNGVVLGSTCRHEVAPAAELLTTGVKHQMSNTKVFTRYKDPDISAGQMIN
GYPSFIKGPQLFWCQYAEMDKLQEISDALKNAGNASDTTLSEDSVPPGSACIALFNEDNL
WYRAKVTSRDLDTVSVTFVDYGNESKVNVGDIKALPPELSDVPPQAFNCQLEGFDLSKGF
WDKKAEDAFFDLVNDKLFNITVEKMGDSETPHFVKLDCNGVLINDAMRSYWKSQIPETPS
DEHLREAEVVSANDFVAAEVNIDSEVTLDADTELVDDKMCSSVLEMHHSEQEKLDLLKDT
EPGNEAQDGPLEITTENVASSDTLSLVPSETQSNLVTTCIKEDEPVSGSTSPSDTTNQHA
FAKETDVDPETTCITEDETVSCSTSPSDTKYQHAFAKEIDVLLDTTCITEDETVSGSTSP
FESTNQLAFVKETDVDPDTTCIKEDETVSGSTNPSDTTNQHTVGEETDVNPTPFPVVLPQ
QSEGATSSISSENVESFLMNNTDSQLCIEEPNSTSFEIIQSDLGYLRRSTEKKPVGSDCV
IWSHVRRSWCPARVLKVSEDAALVLLVEHDSEVVVDPLNIFEILPENPLQTSSIEAAVPS
DLSKGAHTLLKNHASKVNDEDAESGTTVALESEPNDEEKMLIDQMDPGDELADQPQDKGC
GSCSIVLVEDSGVEDALGEGALVQVLSSEPDDSQDDLNTSAGEQRDDCTEMSTRVDLLMD
FLDVAPRDKVQHAHETEHETNTLSKAFNMDVTEDLIVLTSDDGAESDSASDGTLQGDVMD
MEIYPDPEESSCLQDKSNASDSTNSENLQVTHLTLRVEDASDDDVIFVGVLQESQAEVGE
PESEKEKQKRD
NT seq
6696 nt
NT seq
+upstream
nt +downstream
nt
atgtgttctataccggggctcccatcaacaggttcaaatgtacctgtacttattaccaga
gttaatctgaatccatcatgtgttcttgtagagttttggggaaattttgaccaagaccgg
aaatttgcttatcagcagctgaagaaggagatacaataccccagagagagtttctctgaa
tcagatggaaaccctggtgacttgtgccttgtacaagtgtatgaaacatggtatagagcc
cgtatagtttccagagacactgaagagtacagcgtgtttttaattgatgaaggccgaaca
ctgtgtgccactgttaacactctagcatggggaaaaagtgactttttctatcttccccct
gaagttgaattctgtgttcttagcaatgtgttaccactgtctcctgaaaataaatggtca
gcaatggccttcgagttcatgaagaccttctgtggtcgaagagtcaatgctttggttcaa
gatgttcttgtgcctcatcgaacattccttcttgacattccttgtctgtccagacagatg
tttgaaatgggctttgcaaagaaattgtccagtgatcggttcaaggatttcgttgcaaga
tctttacagaccaacaatggaactggagaacctcagagaatttcttccattaggccaaaa
ccagttgagagtattgagcaaatggagaagcaacaggcctacatgtacccagagctgcaa
actgatactgttgagactgtcatggtcacagaagtaacaagtccatttcgaatattctgt
caacttaaggttttctctcaggagctgaaaaagttaaccgaacagataactcggcattat
gagggaagagttggcagaaattttgcaagacctgagaatttgggcagcccgtgtgcatca
agaggaagtgacggcaaatggtatcgttcagttctgcagcaggtcatgtctgccaacaat
gtggttgaggttttgcaggtggattatgggaagaaacaatttgtacaagttgagaatgtc
agacctcttgcccctgaattcttcaggatgcctgtcgtaacgtacgtgtgctcccttcat
ggaatagtcgacagaggtgtcggttggacagcttcacagattgattatctgaaatcgctc
ctgctcaaccgcacagtgattgccaagtttcagtatcaaagcctttctgaaggtgttcac
tatgtcatgctttatggagaggagaacacaaacatcaacaaattgtttgaactgaaacag
aaatgttcactcgactctgaaatgactcttgcagatttcgctgttcagaagagcccatct
caaaacagcaagattttggagacaacagaaacctactctggcgaaacctactctgacctt
aaagggaacaaaccagtctttttcacagaaagtctcgcaccgaacacttcacatctggct
gttgtgcagcacgttgacagccctggaaagttttgggttcaaactcagaattacgctgat
gaattcgaccagctaatgaatgaccttggaaatctgtacattaatccaacaagcgctgaa
gggttgataagaaagcctgttgttggtctcctctgtgcagctaaagcccaagatggtgtg
ttctacagagcagctgtctctaaggtaattgacaagaaagcagaagtttacttcctcgac
tacggcaacacagaacttgttgattgtttcaacctccgacaattgcctctgagattccag
cagctgccagctgtggcggtaaagtgctccctccatggcattaaatccagactgaaacac
tgggacgagagggctacgttgttcttttcaaaacttgtcgaagacaaaaaacttgaattg
cacgtacaagacaagcatcaagacactcacatggttcaattagtggacccgagtttagat
ggagaaaatgatgtgaataagttgttgtgcaaagcaaattttgccgatagtgaaaagagc
attgtggatagttctgttgtaagatcttgtggttttaaaatcacaaacacctctggcata
ttctatacagacactcaacctcagacgccttccagttcttctgccgtggtggaaagtgca
tcggttttcaaggaatacttgtttccaattggaagttcactggaggtaaccgtatcctac
attgagagtccaaatgacttctggtgtcaaaaagcccaaaatgctgcatgcttagaagtg
ctaatgcaagatattcagcgtttctatgctcacagtgaatttcagccacctttggaagca
gcttgtgttgctcgtcatcctgaaactgggatctggtacagagccttggtcattcaaaag
caccaaacgcctcatgttgaggtcttgttcgttgactatgggcagacaaagaaagttgcc
attgaagatcttcgaaagatcaatccagcattcttgaagatgaaaggacaagcctttcga
tgtagtctatataatctgatccacccggtttcccactcagctttagattggagccctgaa
gccacactacagtttcaagagtttgttgatactgcagcatccatgaacgtgcctttgaaa
tgcactatttttgctgtaatgtatgattcccagaaagttgtgtttaatgtggtggacttg
gagaccccattccaaagcatttgcaatctccttgtccagaggcgtctagctgatcgtgca
ccctctaagagagcgcctctcccaccctttcgcctggacacctactattattcaacacac
ggagtcaagactggatgtgaagaggaagtgactgtcacctgtgtgaaaagtgtcactcag
ttcttttgccatctcgccaggaattcagatgagattgagaaactggcaagcaaggtcaat
tccctatgccgtcaactagagttgaccaagtgtcctcagacttttggaaccgtttgcttt
gcaaaatacaccgatggactttggtatagaggccagataaagtcttcaaaaccgtcagtg
gtgatcaattttgtggattatggtgacacattggaagttgaaaaatcagacttgctgcca
gttccaattgaagcaggagagattatgtccgtcccagtgcaggcaattgaatgtgggttg
tcggacatgccagaaaatgtgccagatgcagtggaaaattggtttcagaattttgcggac
agccattgttttactgctttgattgtggcaaaagaacctgcaggaaagcttatggtggaa
ctttatgagggaaaaactaaagtaaatgcactgatcagacagaagtttcacaatgaaatc
catacaattgaaccaagcccactcaaaggatatagttcaaagaaccgtgcacaagttcag
gcagagagctttggaaaagaaagttccagtggtcttaagagagatcgcacagaccaagtt
caacagtcccgggaaagtcatgcagcacaacgaggaaacattgaatcaaaacagccacaa
agcaagtggggatttcatacagatggtagaccagaaccaacaagagattttgggacaatc
cataattctcagaggcaaaatgaaccacaaagaaagtccaatgatagagctgatgcacgc
cacccatgtgcatctgtcaaaactgatgatgttaaaccaaagtcccaggctcttctcaga
gaatcggcgctcccagggaaattaataaaacctggtatagaagctgaggtattcatctct
cattgcaatagcccttgtagcttctttgttcagtttgcggcagatgaggatgacatttac
tcacttgtagagaagttgaatgctgaccagtcgaggtgcgcaaacattgattctagtgag
attcatgagggagacctggtctgtgcaatgtttcctgatgataactcttggtaccgtgca
gcagtgcgaaaaaacactgacaaaattgacgttgaatttgttgactttggaaacacggct
gtgatttctgcctcaaaaatatgtcgtcttgatcaatcatttgcttcgtttcctaggtac
agcatccactgctctgtacataaactagatgttgacggcgtagaccaagaaattgcaccc
aacttcaaacaagtaattgatcaaaacattgaaaaggtcatgtgcacgttcgttaaaatg
tcagggactgtgtgggaagtgaaactcaatgttaatggtgtagtgctggggtccacctgc
aggcatgaagttgcaccagcagctgagcttttgactacaggtgtcaagcatcagatgtcc
aataccaaggtctttacccgttacaaggaccctgacatatcagctggtcaaatgatcaat
ggatacccctcatttatcaagggtcctcagctcttctggtgccaatatgcggaaatggac
aaacttcaagagatttcagatgctttaaagaatgctggtaatgcatcagatacaactttg
agtgaggactctgtgccacctggaagtgcttgcattgctctcttcaatgaagacaatttg
tggtatcgagctaaagtaacatctagggaccttgacaccgtctcagttacctttgtagac
tatggaaatgaatcaaaagtcaatgtgggtgacatcaaagcacttccacccgagctatca
gatgtgccccctcaggcatttaactgccagcttgaaggttttgacctttccaagggtttc
tgggataagaaggcagaagatgctttttttgatctagttaatgacaagctttttaatatc
actgttgaaaaaatgggggactctgaaaccccacacttcgtcaagctagattgtaatggt
gttttaatcaatgatgccatgagaagctattggaaaagtcaaattcctgaaactccatca
gatgaacacttacgtgaagcagaagtggtgtctgccaatgactttgtggctgctgaagtt
aatatcgactctgaagttacccttgatgcagacactgagcttgttgacgacaaaatgtgc
tcttcagttcttgaaatgcatcattccgaacaagagaagcttgatttactgaaagataca
gaacctggaaatgaagctcaagatggcccacttgagattactactgaaaatgttgcctca
tctgatactttgagtttagtgccctctgaaacacaaagcaacctggttaccacatgcatc
aaagaagatgaaccagtttcaggttccacaagtccatctgacacaacaaaccagcatgcc
tttgctaaagagacagatgttgaccctgaaaccacatgcatcacagaagatgaaacagtt
tcatgttccacaagtccatctgacacaaaataccagcatgcctttgctaaagagatagat
gttctcctggataccacatgcatcacagaagatgaaacggtttcaggttccaccagtcca
tttgaatcaacaaaccagcttgcctttgttaaagagacagatgttgacccggataccaca
tgcatcaaagaagatgaaaccgtttcaggttccacaaatccatctgacacaacaaaccag
cataccgttggtgaagagacagatgttaacccaacaccttttcctgtagttttgccacag
caatctgagggagcaacatctagtatctcctcagagaatgtagaaagcttcttgatgaat
aacactgattctcaattatgcattgaggaaccaaattcaacatcatttgagatcattcag
tcagacttgggctatttgaggcgatcaacagagaagaagcctgttgggtcagattgtgtg
atctggtctcatgtaaggaggagttggtgcccagcacgggttttaaaagtttctgaagat
gcggcattggttttgcttgtggagcatgattctgaggtggtggtagatccactcaacatc
tttgaaattctgccagagaatccattgcagacttcaagcattgaagctgcagttcctagt
gatctaagcaagggagcacataccttattgaagaaccatgcttcaaaggtaaatgacgaa
gatgcagaaagtggaactacagttgctttggagtctgaaccaaatgatgaagaaaaaatg
ctcattgaccaaatggatccaggtgatgaacttgcagaccagcctcaagacaaggggtgt
gggtcctgctccattgttttggttgaagattctggggttgaagatgcattgggggaaggt
gcacttgttcaagtactgagttctgaaccggatgactcccaagatgacttgaatacttca
gctggagagcaaagagatgactgtaccgagatgagtaccagagtggatttactgatggat
ttccttgatgttgctccccgtgataaggtacagcatgcacatgagactgagcatgaaacg
aataccttatccaaggcgtttaatatggatgttactgaagatctcattgttctgaccagt
gatgatggagcagagtctgactcagcatctgatggcacgcttcagggagatgtgatggac
atggaaatctatcctgatcctgaagaatcttcatgcttacaagataagtcaaatgcatct
gatagcaccaactcggagaatctacaagtcactcatctgaccctgagagttgaggacgca
tctgacgacgatgtcatttttgttggtgttttgcaagaatcccaggcagaagtaggtgag
ccggagagtgaaaaagaaaaacagaaacgtgactaa
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integrated database retrieval system
