Pimephales promelas (fathead minnow): 120493737
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Entry
120493737 CDS
T08155
Symbol
znfx1
Name
(RefSeq) NFX1-type zinc finger-containing protein 1
KO
K27391
NFX1-type zinc finger-containing protein 1
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
120493737 (znfx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
AAA_11
ZnF_RZ-type
AAA_19
AAA_30
ResIII
DEAD
SLFN-g3_helicase
AAA_22
PhoH
AAA_16
nSTAND3
Motif
Other DBs
NCBI-GeneID:
120493737
NCBI-ProteinID:
XP_039548470
LinkDB
All DBs
Position
Unknown
AA seq
1952 aa
AA seq
DB search
MSNPRGGGQQRGRGGFSGPQRRDGSVPGRRQASRSPNRTRGRGGGQGEGGGRGQGDRSQR
YPDEKAQGSRGGRGGDGRGRGLWRGENAPHLHRPVIRGRPTNGPPSLRAFGRPVSGFNPT
LLNHPFQARVNHTEHTHHQRASRSMTDLSASPQGEEPQRGREEAMRGRGGFGRGRGRWRD
GTPEVRKLGYRTLEGLLEKEASEVAITLSSSSGLKNLLEENPMRSDLVQLICQVLCKAFQ
SRIDRKNVMHLAHVFKDSTFFRNLLPYHVTGMMSDYKQDRRDQYPQHVSNIISLLSHVLN
MFPHSSVQSVSMLVALLKPTINQLRASGVDILDSTDGDLEKVQDMVDHLQEKSREGTLRT
DNYSFLAADEDAPPGEEDFRTMSIYPTFDEFHLDQRPFLRPNIMSQSFPNARIYLDTHFR
LLREDFVRPLREGVKQILRDNTDGVPINKRRFDDIRVYTDTRLLLPLCTSTGIAYKVQFD
PQPLKFVRWENSKRLIYGSLVCLSMDNFETFLFATVADRDPKFLKHGLVNLSFSSESRER
MAMVQPSDTFLMVETTAYFEAYRYVLEGLQEEDENDVPFQRYIVECNTEVDPPAYLRVEG
RSYDLSCITAEGQEKIPPFNPLTQHAWPDEETMGLDESQLQALKLALTNELAIIQGPPGT
GKTHVGLKIAQALLENNKAWSQDCPMLVVCYTNHALDQFLEGIHGFLKKGIVRVGGRSNS
ETLKSFGLRELTRAANFRKGLPHHLRKAHHRIYTEMEQAEELLKRQTAQLECSLRGVLRE
DFLERYISSEHWDSLCLQPVYDDFERVGKKKKHSMIAEWLGIGSNISLQGPQLTFGADEN
EAQLEDEELIDIEEEAELIQAERILLDSDHRDKDRQKLKRDEKTIADMAEEMLSLNLNDT
EPQPDQSRNQSQAQAEEWQVQGHQKKKMKQMVRKELRKTSALSEAQERHIRDVWSLSQID
KWKLYRLWLLRYRTDLRNQSLAAEQLYQDAAERLNEIRRREDLCVLKQALVVGMTTTGAA
KYRQALQELRPRLVIVEEAAEVLEAHTITTLSKACQHLILIGDHQQLRPSATVYDLAKNF
NLEVSMFERLVKVNFPFVRLNYQHRMRPSIARLLTPHIYETLENHPSVLEYDNVKGLLTN
LFFVDHSQSEEEIKDGRSHQNPHEAHFVVELCRYLLNQDYKPSQITILTTYTGQLHCLRK
LMPSPLFTGVKVHVVDKYQGEENDIIILSLVRSNSQGRVGFLNISNRVCVALSRAKMGLY
CIGNMDMLSSVKLWSNILHTLREADQIGPALTLSCQNHPDKRIQASCGNDFKGAPEGGCD
QPCEYRLECGHVCTRMCHPYDAEHKKYKCMKDCPKVKCELGHKCMKRCYQECGECRVLVN
KIIPSCQHNQEVPCHQDPATFECQEDCQKTLPCGHPCKATCGVSCTSQCMTRVQMELRCG
HVQKEPCYISRDHKNEPNCRQKCGTTLKCGHTCPGSCHACYQGRLHRGCTHKCQATLVCS
HPCREPCVRDCPPCSSLCENRCLHSICKKTCGQPCARCIEPCEWQCPHYTCTKLCHEPCD
RPPCSVPCNKELPCGHRCIGLCGDPCPKKCRVCNKDEVTEIFFGNEDEPDACFIQLEDCR
HLFEAKGMDQYMSLDEDQASGLDQRAIKLKECPRCRTPIRRNLRYGTHINRSLAAIEMVK
EKINGLPDVIKQKQEVLRLQLVEQINLKNHLPKEFDSIREKLNTNDLSLQQLWHLENLMS
FLESIGKLKEMQKERMTPQDNFKFSRKLEEVLKFLLDRNQRFFDQQVEDLERELKRLSYL
AELNVRCKKSEFKLFDDVLASEVQLLREILEDTLPFSEGLERTVKKKFTELDAKLPVSGL
GITDDERVMILKAIGLNKGHWYKCPNGHVYAIGECGGAMEQSKCPECNADIGGTNHTLLQ
GNDVASEMDGAQHAAWSDAANMGNYNLMDFED
NT seq
5859 nt
NT seq
+upstream
nt +downstream
nt
atgtccaatccaagaggaggaggtcaacaaagaggaagaggaggcttcagtggccctcaa
agaagagatggttctgtgcctggtcgaagacaagcaagtaggtctcccaatcgaaccaga
ggaagaggaggtggccaaggcgagggaggaggaagaggtcaaggtgacaggagtcaaaga
tatccggatgaaaaagcacaaggctcaagaggaggtagaggaggagatggaagaggtcga
ggactgtggagaggagaaaacgcaccacatctccaccgccctgtgataaggggacgccca
acaaatggtcccccatccttacgagcatttgggagacctgtttctgggttcaatccaact
cttctaaatcatccttttcaggctcgtgtgaaccacactgaacacacacaccaccaacga
gccagtagaagcatgacggacttaagtgccagtccacaaggtgaagaacctcaaagagga
cgagaagaagctatgagaggtagagggggtttcgggagaggaagaggacgatggagagac
ggcacacctgaggtacgcaaactggggtatagaacgctcgaaggtctactggagaaagaa
gcgtccgaggtggccatcaccctttcatctagcagtgggcttaagaatctgcttgaggag
aatccaatgagaagcgacttggtgcaattgatctgtcaggttctctgcaaggcctttcag
tctcgaatcgaccgcaagaacgtcatgcatttggcccacgtcttcaaggactcgacgttt
ttccgtaacctcttgccctatcatgtgacgggaatgatgtcagattacaagcaagaccga
agggatcagtatccccaacatgtgagcaacatcatcagccttctctctcatgttctcaac
atgtttccacacagctctgtccagtctgtgtcaatgttggttgctcttttgaaaccaacc
atcaaccagttgcgtgcctctggtgtggatattctcgacagtaccgatggggacttggag
aaggtgcaggatatggtggaccatctccaagagaagtcaagggaaggcaccttgcggacc
gacaactactctttcctggcagctgatgaagatgctccacctggggaggaagacttcagg
acgatgagcatctatccaacctttgatgagttccacctagaccagaggcctttcctgaga
cccaacataatgtctcaaagcttccctaacgctcgcatctatctggacacacacttccga
cttctgcgtgaagatttcgtgaggccactgcgagagggcgtcaagcagatcctgcgcgat
aatactgatggggtaccaataaacaagaggcgttttgatgacatcagagtctacactgac
acccgattgctgttaccactctgcacatccacgggaatcgcctacaaagtgcagtttgac
ccacagcctcttaagtttgtccggtgggaaaattccaaacgtcttatttacggatccctt
gtgtgtctctccatggacaacttcgagaccttcctgtttgcaaccgtggccgatcgggac
ccaaagtttctaaagcatgggctggtgaatctgtctttttcttctgaaagcagggaaaga
atggccatggttcagccctcagacaccttcctgatggtcgagaccacagcttactttgag
gcctaccgatacgtcctagaaggtctccaagaggaagacgaaaatgatgttccctttcaa
aggtacatagtggagtgcaacactgaggtagatcctccggcttaccttcgggtggaggga
aggtcatacgacctgtcgtgcattacggcagaaggacaggagaagatcccacccttcaac
cccctgacccaacacgcctggcctgatgaggaaacaatgggtctcgatgaaagccaactt
caagcactaaaactggctttaaccaatgagctggccatcatacagggaccaccaggcaca
gggaagacacatgttggactaaagatcgctcaggctttgctagagaataataaggcctgg
tctcaggattgtcctatgctggtggtctgctataccaatcatgctcttgaccagtttctc
gaaggtatccatggcttcttaaagaagggcattgtaagagttggaggacgaagtaacagt
gaaactctgaagagtttcggtctaagggagctgaccagggctgcgaacttccggaaaggt
ttgccacatcatctgaggaaagcccatcataggatctacacagagatggagcaggcggag
gagctcttaaagagacagaccgcacagctcgagtgcagtttgcgtggcgttctcagagaa
gactttctggaaagatacatctcttctgagcactgggacagtctgtgtctacagccagtg
tatgacgactttgaaagagtggggaagaagaagaagcattcaatgatagcagagtggctc
ggcatcgggtccaatatttctctgcaggggccacaattaacatttggagcagatgaaaac
gaggcacaactagaggacgaggaactgatagatatagaagaagaggcagaactgatccag
gccgagaggatattgttggattcagatcatcgggataaagaccggcagaaactgaaacgg
gatgagaaaaccatcgctgacatggctgaggagatgttgtctttgaacctgaatgatact
gaacctcaaccagaccagagtcgcaatcagagccaggctcaggctgaggaatggcaggtg
caaggccaccagaagaaaaaaatgaagcaaatggttcgaaaagagctgaggaagacttcc
gccctgagtgaggcacaagaaaggcatatcagagatgtgtggagcctgagtcagatagac
aaatggaaactgtatcgtctttggcttttgcgctatcggacggatcttcgcaatcaaagc
ctggccgctgagcagctctatcaggatgcagcggagcggctaaatgagatccgccgtcgt
gaggatctgtgtgtgttgaagcaggcgctggtcgtcggtatgaccacaacaggagctgct
aagtacagacaggcacttcaggagctgcggcccagactggtgatcgtggaggaggcggcg
gaggtgttggaggcgcacaccatcaccaccctcagcaaagcctgccagcacctcatactg
atcggagatcaccagcagctgaggcctagcgcaacagtgtacgatcttgccaagaatttc
aatctggaagtgtcgatgtttgagaggcttgtcaaagtgaacttcccgtttgtgcgcctc
aactaccagcatcgcatgaggccaagcatcgctcgactcttgactcctcatatctatgaa
actctggaaaaccacccctctgtgctggagtatgacaatgtcaaggggcttctgacaaat
ctcttttttgtggatcattctcaaagtgaggaagagattaaggatggacggagccaccag
aatcctcacgaagcacattttgttgttgagctttgccggtacttgcttaaccaggactac
aagccctcccagattaccattctcacaacctacaccggacaacttcactgtctgcgtaag
ctcatgccctctccacttttcactggcgtcaaagtccatgtcgttgacaaataccaaggg
gaggagaatgatatcatcatattgtctctggtgcgcagcaacagtcaggggagggtcggc
ttcctgaacatatcaaaccgagtctgtgttgctctctctcgtgctaagatgggtctttat
tgtattgggaatatggacatgcttagctcggttaaactgtggagcaacatccttcacact
ctgagagaggcggatcaaattggtcctgctttgacgttgagctgtcagaaccatccggat
aaacggatccaggcgtcctgcgggaatgacttcaaaggtgctcctgagggtggttgcgat
cagccctgcgagtaccgcctggagtgtggccacgtgtgcacccgtatgtgccacccatac
gatgctgagcacaagaaatacaagtgcatgaaagattgtccaaaggtgaagtgtgaactg
ggccacaaatgcatgaagcgctgttaccaagagtgcggtgaatgccgggtactcgtaaac
aagataataccgtcatgccagcacaatcaggaggtgccctgccaccaagaccctgccaca
tttgagtgccaagaggactgccagaagaccctaccatgcggccatccatgcaaggcgacc
tgtggcgtttcctgcacctcacagtgcatgacaagagttcagatggagctaagatgtgga
cacgtccaaaaagaaccatgctatatttccagggaccacaaaaatgagccaaactgcaga
cagaaatgtggcaccaccttgaaatgtggccacacttgcccaggatcttgccatgcatgc
tatcaaggtcgcctgcatagaggatgcacccacaaatgccaagcaaccctcgtgtgttct
catccctgtcgggaaccctgtgtcagagattgtccaccatgttcctcactttgcgagaac
cgttgcctccacagcatctgtaagaagacttgtggacagccttgcgcccgctgcatcgaa
ccctgtgaatggcagtgccctcattacacctgcaccaagctttgtcacgaaccgtgtgat
cgcccaccttgttcagttccctgtaacaaagaattaccctgcggacatcgttgcataggc
ctatgcggagacccttgtcccaaaaagtgtcgcgtttgcaacaaggatgaggtcacggag
atcttcttcggcaatgaagacgaaccggatgcttgttttattcagctagaagattgcagg
cacttgtttgaggctaaaggaatggatcaatacatgagtctcgacgaagaccaagcttct
ggattggatcaaagggcaattaaactcaaggagtgcccaaggtgtcgcactcccatccgt
agaaaccttcggtatggcactcacatcaaccgcagcctggcagccatcgagatggtcaag
gagaagatcaatggtttgcctgatgttatcaagcaaaagcaggaagtcctacgtttgcaa
ctggttgagcaaatcaacttgaagaatcatcttcccaaagagttcgactccattcgtgag
aagctcaacacaaatgacctttcattacaacaactttggcatctcgagaatttgatgagc
ttcctcgagagcattgggaaactgaaagaaatgcagaaagaacgtatgacaccacaagac
aattttaagttctcccgcaaactcgaagaagttttgaaattcctcttggatcgaaatcag
aggttttttgaccagcaggttgaagatctcgaacgtgaattgaagagactttcctacctg
gctgagctcaacgtgcgctgcaagaaatctgaatttaaactttttgacgacgttcttgcc
agcgaagtccaactgttaagagagatcctggaggacaccttgcctttctctgagggtcta
gaacgtacagtcaagaaaaagttcacagagctggatgctaagcttccggtcagtggcctg
gggatcactgacgatgagagggtgatgatactcaaagccatcggtttgaataaagggcat
tggtacaaatgtcccaacggacacgtgtatgcaattggtgagtgtgggggtgctatggaa
caaagcaaatgtccagaatgcaacgctgatattggaggtactaatcacacactccttcag
ggaaatgatgtggcgtctgagatggatggtgcacaacatgctgcctggtcagatgctgcc
aacatgggaaactataacctgatggactttgaagattga
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integrated database retrieval system
