Pimephales promelas (fathead minnow): 120493738
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Entry
120493738 CDS
T08155
Symbol
fip1l1a
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
120493738 (fip1l1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pprm03019
]
120493738 (fip1l1a)
Messenger RNA biogenesis [BR:
pprm03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
120493738 (fip1l1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
120493738
NCBI-ProteinID:
XP_039548472
LinkDB
All DBs
Position
Unknown
AA seq
465 aa
AA seq
DB search
MSTREVEKTADESTDDETDWLYGDDNFEEEETTEKEVFSALIGDVDGVNRLNYQESESDS
DDDDVCVTIGDIKTGGSQGLSFGSNSINLNIKSSVSGSKSRGLDVDAEGSVLQVDVESFE
EKPWRKPGADLSDYFNYGFNEDTWKAYCDKQRRLRMSLEILSLSSSNKIMVHQSSSDLSE
YSSRKSSGSINVIGGHAGTISRVEGRRRHSADENNIQVVSEQSSDTKISSPKQMPFFPPN
IPPPPFPPPSISTTPPLIPPPGFPLPPGPPPPMIPTLDSSGRLAGGYDRRSAPPYPFTAG
VYSPVVGMASWPGVIESDKAWEDYPRHNKERVREKTRERGHKTERERDRERYRETDREHS
PSSQDHRSEEERASRHRDHSHHGSERYRESSGREGERDRHRERRHRERSEQHRSSRSGSS
RRRHDSGDADSHRRHRHKRSRHNRGSVQPSEECTANQENQSEATE
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgtccacacgagaggtagagaaaacagctgacgagagcactgatgacgagactgactgg
ctttatggagatgacaattttgaggaagaagagacaacagaaaaggaagtgttcagtgct
ctgattggtgatgtggatggtgtgaatagactcaactaccaggagagtgaatcagacagt
gatgatgatgatgtctgtgtgaccatcggtgacataaaaacaggcggatctcagggcttg
tcatttggttccaattccatcaatctgaacataaagtcctctgtatcaggctccaagtct
agagggctggatgtggatgctgaaggcagtgtcttgcaggtggatgtggagtcctttgag
gagaagccatggaggaaaccaggtgcggatctgtctgactactttaactatggttttaat
gaggacacctggaaggcatactgtgacaaacaaagacgattacgcatgagtctagagatc
ctgagcctgtcatcatccaacaaaataatggtgcatcagagttctagtgatctgtctgaa
tactcatccaggaaatcgagcggttcgatcaatgttatcggaggacatgcagggaccatc
agtcgagtggaaggccgaagacgtcacagcgctgacgaaaataacatccaggtcgtttca
gagcagtcctcggacacaaagatatcctccccaaagcagatgcccttctttcctccaaac
atcccacctccacctttccctcctccctccatcagcaccacacccccccttataccacca
cccggtttcccattacctcccggtccccctccacctatgataccaacattagatagtagt
ggacgtttggcaggaggctatgatcgacgctcagctccaccttacccttttactgcaggt
gtgtactcacctgtagtgggcatggcttcctggcctggtgtaatagaaagtgacaaggca
tgggaagactacccccgtcataacaaagaaagggtgagagagaaaaccagagaaagaggg
cacaagacagagcgagagcgtgacagagagcggtacagagaaacagatagagaacacagt
ccatcctcccaagaccacagaagtgaggaggagcgtgcatctcgacacagggatcacagt
catcacgggagcgagaggtacagggaaagctcgggaagagaaggagagagggacagacat
cgagaacgaagacacagagaaaggagtgaacaacacagatcctcacgcagtggcagcagt
aggaggcgtcatgatagtggtgacgcagatagccacaggagacacaggcacaaacgctcc
agacacaaccgaggaagcgttcagcccagcgaggagtgcactgcgaaccaggagaaccag
tcagaggccacagaataa
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