Pimephales promelas (fathead minnow): 120493762
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Entry
120493762 CDS
T08155
Symbol
pdgfra
Name
(RefSeq) platelet-derived growth factor receptor alpha
KO
K04363
platelet-derived growth factor receptor alpha [EC:
2.7.10.1
]
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04010
MAPK signaling pathway
pprm04020
Calcium signaling pathway
pprm04144
Endocytosis
pprm04510
Focal adhesion
pprm04540
Gap junction
pprm04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
120493762 (pdgfra)
04020 Calcium signaling pathway
120493762 (pdgfra)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120493762 (pdgfra)
09144 Cellular community - eukaryotes
04510 Focal adhesion
120493762 (pdgfra)
04540 Gap junction
120493762 (pdgfra)
09142 Cell motility
04810 Regulation of actin cytoskeleton
120493762 (pdgfra)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pprm01001
]
120493762 (pdgfra)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
pprm04090
]
120493762 (pdgfra)
Enzymes [BR:
pprm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
120493762 (pdgfra)
Protein kinases [BR:
pprm01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
120493762 (pdgfra)
CD molecules [BR:
pprm04090
]
Proteins
120493762 (pdgfra)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
ig
Ig_2
VEGFR-1-like_Ig-like
VEGFR1-3_N_Ig-like
V-set
GBD_ATRN
Kinase-like
Motif
Other DBs
NCBI-GeneID:
120493762
NCBI-ProteinID:
XP_039548533
LinkDB
All DBs
Position
Unknown
AA seq
1461 aa
AA seq
DB search
MGFLETHLVLGIVLLGAFSDVSKPWPVINSDKKEFILTPHSEFNITCSGESRVRWAEPLP
DNSEMHSGFNHSTLVITDVEALNTRLYACEYVDHPERYADIYVFVPDPEVPFVSEPVVDT
NEMGIIIPCLATNPHSQVILRDLQSGDEVSLFYDHKIGFIGIISPGQYVCETSVNGKEVR
SSVYTVTDDEDDKQHENEEEQQGFSMQLRASMDSVKEGDAVNLTCETPPGKAFHQQWLHP
QNQAREAVPIKLAFPDKVQYILNIPKSSVADTGRYECSVTNQINGQTKSSSLWITVHESS
FVEVISNGIGPAEVASLLEEKEFTIYIDADPEPKVRWFKDGLQLDDRYISTKTTHLGGLR
YENILVFRHPIEEDSGIYEVVASTGSRTSRFSFKLLVEAIYPELPQSVLAPVMWPQRESM
EVSLHSTFRLTCRGQAELTWDSPVNLHDQTNSEKKGLFISTVTVGNATAAHTGKYSCSYE
FSNNTEKTTIYIYVPDPQTPFVPFMIPFENHVLSHDEMEIPCRVTDPDASVSLIHIETNQ
VLPSAYDSKRGFVGLFSAGTYVCRALINGQNYDSTQYIVHGWTGGSDLRVELRAEKKALL
AGETITVDCVARGSMMLEDHWKYPGKLADRGVKTVKESERDLEIHYTLRVTNASPKDSGV
YACSITNINSNESQTKELTITVYDHEFVHINPLIGPVETTRLDEVREFRVDIESLPAPKV
TWLKDGSVLGDVAAEISTILLEISDTSYQAVLTLIRAKAEDSGNYTIRAEIGSLTTSYNF
YLQVKVPPVIVDLIDIQHGSAAGQEVVCTVGGSPVPDVDWYICKNIKHCANDSSQWIPLP
INSTDITVELQMDVDNHIESHIIFHHLESTIAVRCMARNDMGAVSREVKLVSNGPHSELT
VAAAVLVLLVIVVISLIVLLIIWKQKPRYEIRWRVIESVSPDGHEYIYVDPMQLPYDSRW
EFSRDSLVLGRVLGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELK
IMTHLGPHLNIVNLLGACTKSGPIYIITEYCFYGDLVNYLHKNRDGFLSRHTEKGKKDLD
IFGINPADESSRSYVILSFEGKGDYMDMKQADTMQYVPMLEMSEASKYSPIQRSDYDHPP
TYRQSIDGEVENLLSDDTNEGLTTVDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLSQ
GKIVKICDFGLARDIMHDNNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEI
FSLGGTPYPGMVVDSSFYNKIKSGYRMAKPEHASSEVYELMMKCWNSEPEKRPSFHSLSD
TVTSLLPSGYKRCYERVNHDFLKSDHPAVTRVQCIDNDDEYMGVLYKNQGKLKDRESGFD
EQRLSSDSGYIIPLPDLDPLSNEDYSKRNRHSSQTSDESAIETGSSSSMTKREGETLEDI
TLLDEMCLDSESGDLVEDSFL
NT seq
4386 nt
NT seq
+upstream
nt +downstream
nt
atgggattcctggagacacatctcgttttggggattgtcttactaggggcattttcagat
gtttcaaaaccttggccggtcattaattcagataaaaaagaatttattctgacacctcat
tcggagttcaacatcacatgctctggagaaagcagagtgagatgggccgagccattaccg
gacaacagcgaaatgcattccgggtttaatcacagtactttggtgatcactgatgttgag
gcattaaacacacgtctctatgcctgcgaatatgtggatcatcccgaaagatacgctgat
atctacgtttttgttccagatcctgaggttccattcgtgtctgaacctgttgttgacaca
aatgagatgggcataattatcccatgtctcgctacaaacccacattctcaagtgattctc
agagacctgcagagtggggatgaggtttctctgttttacgaccacaagatcggctttatc
ggcataatatcaccaggtcaatacgtttgcgagacgagcgtgaatggcaaagaagtgagg
agcagcgtttatactgtgacggatgacgaagatgataaacagcatgagaacgaggaagaa
cagcagggcttcagcatgcagctaagagccagtatggattctgtgaaagagggggatgct
gtcaatctcacctgtgagactcctcctggaaaggctttccaccagcagtggctgcatccc
caaaaccaggccagagaggctgttccgataaagttagctttcccagacaaggttcagtac
atcctcaacatcccaaaatcctctgtggcagacactggacgctacgagtgttctgtaacc
aaccagatcaatggacaaaccaaatccagcagcctgtggatcacagtccacgagagctct
tttgtggaagtaatatctaatggtattgggccagcggaagttgcgtctcttctggaggaa
aaagagttcaccatttacattgatgctgaccctgagccaaaggtcaggtggtttaaagat
ggccttcagctggatgaccgctacatctccaccaagaccactcatctgggtggcctcaga
tatgagaatattctggtcttccggcatcccatagaagaggacagtggcatctatgaggtt
gttgcgtcgactggctccaggacttcaagattttcattcaaactgctggttgaggccata
taccctgagctgccacagtcagtgctggctccagtgatgtggccccagagggagagcatg
gaggtgtctctccactcaactttcagactcacatgtcgaggtcaggccgagctcacttgg
gacagccctgttaatcttcatgatcagaccaactctgaaaagaaaggactcttcatctcc
actgtgactgttggcaatgcgacagctgctcacacaggaaaatacagctgcagctatgaa
ttcagcaacaacactgagaagaccaccatctacatctatgtgccagacccacaaacgccg
tttgtaccattcatgatacctttcgaaaaccacgttttgagtcatgatgaaatggagatt
ccctgccgtgtgacagaccccgacgccagcgtctctctgattcacattgagaccaatcag
gttctgcccagtgcctatgacagcaagagaggtttcgttggcctcttcagcgctggcacg
tatgtctgcagagccctcattaatggacagaattatgacagcacacagtacatcgttcat
ggctggacaggagggtctgatttgagggttgagctacgagcggagaagaaggctctgctg
gcgggtgagacaatcactgttgactgtgtggccagaggcagcatgatgttggaggatcac
tggaaataccctgggaaactggcggatagaggagtaaagaccgtgaaggagagtgagcga
gatcttgagatccattatactctgagagtgactaatgcctcaccgaaagacagcggcgtc
tacgcctgctccatcactaacattaacagcaacgagagccaaaccaaagagctcactatt
accgtctatgatcatgagtttgtgcacataaacccattgattggtccagtggagactact
aggctggatgaggtgcgagagttcagggtggacatagagtctttacccgcccctaaagtc
acatggttaaaggacggttccgttctgggagacgttgctgcagagatcagcaccatcctc
ctggaaatcagcgataccagttaccaggctgtgttgaccctgatcagggctaaagcagag
gacagtgggaactataccatcagggcagaaataggcagcctaactaccagctacaatttc
taccttcaggttaaagttccccctgtgattgtggacctgattgacatccaacatggctct
gctgcaggtcaggaagtggtgtgtactgttggcggctcccctgtcccggacgtggactgg
tatatctgcaaaaacattaaacactgtgccaacgattcctcccagtggataccgcttccg
atcaactctacggacatcactgtggaactccaaatggatgtggacaaccacatcgagagt
cacatcattttccaccatcttgagagcacgattgctgtgcgctgtatggccagaaatgac
atgggtgctgtttcacgggaggttaaacttgtgtcaaatggtccgcactcagagctcact
gtggctgctgctgttctggtgctgctggtcattgtcgtcatctcactcattgtgctgctc
attatctggaaacagaaacctcgttatgagatcagatggcgtgtgattgaatcggtcagt
ccggacggtcacgaatacatctatgtcgatcccatgcagcttccatatgattcccgctgg
gagttctctcgagatagccttgttctgggtcgtgtcctgggctcaggagcgtttgggaaa
gtggtggagggcactgcttacggactcagtcgttctcaacctgtgatgaaagtggctgta
aaaatgcttaaaccaacagcacgctccagtgagaaacaggctttgatgtcagagctgaaa
attatgacccacctgggccctcacctaaacatcgtcaatcttctgggagcgtgcaccaaa
tcaggaccaatctacatcatcacagagtattgtttctatggagacctggtgaattacctg
cataagaacagagatggttttctcagccgccacacagaaaagggcaagaaagatctagac
atctttggcatcaaccctgccgatgagagcagtaggagctacgtcatcctgtcttttgag
gggaaaggtgattatatggacatgaagcaagcagacaccatgcaatatgtccccatgctg
gaaatgagtgaagcttcaaaatactctcccatccagagatcagactatgaccatcctccc
acttacagacagtcaattgacggtgaagttgagaaccttctctcagatgacaccaatgaa
ggcctgacgacagtggacctcctcagcttcacctatcaggtggctcgaggaatggagttc
ttggcctctaagaactgtgtacacagagacttggctgcacgtaatgtcctgctgtctcaa
ggcaagatagtgaagatctgtgacttcgggctggccagagatatcatgcacgataacaac
tatgtctccaaaggaagtacttttcttccagtgaagtggatggcccctgagagtattttt
gataacctgtacactacactcagtgacgtctggtcttatggcatcttattatgggagatc
ttctctcttggagggacaccttatccaggtatggttgtggattccagcttctacaacaag
atcaagagtggataccgaatggcgaaacccgagcatgcttccagtgaagtttatgagctt
atgatgaagtgttggaacagtgaaccagagaagagaccgtctttccacagcctgagtgat
acggtgacctctctgctgccctcaggatataagaggtgttatgaacgtgtgaatcatgac
ttcctgaagagcgatcaccccgctgtgactcgggtgcagtgtattgacaatgatgatgag
tacatgggcgtgctctacaagaaccagggcaaactaaaggaccgcgagagcggctttgat
gaacaaagactcagctctgacagcggttacatcattcctctgccggacctcgacccactg
tcaaatgaagactacagcaagaggaaccgccacagctctcagacgtcggatgaaagcgca
atagagacaggctctagcagctccatgaccaagcgtgaaggagagaccctggaggacatc
accttgctggacgagatgtgcttagactcagagtcaggagacctggtggaggacagtttc
ctgtaa
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integrated database retrieval system
