Pimephales promelas (fathead minnow): 120493853
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Entry
120493853 CDS
T08155
Symbol
casp8ap2
Name
(RefSeq) CASP8-associated protein 2
KO
K25593
CASP8-associated protein 2
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pprm03019
]
120493853 (casp8ap2)
Messenger RNA biogenesis [BR:
pprm03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
120493853 (casp8ap2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myb_DNA-binding_7
Motif
Other DBs
NCBI-GeneID:
120493853
NCBI-ProteinID:
XP_039548685
LinkDB
All DBs
Position
Unknown
AA seq
1999 aa
AA seq
DB search
MDFMDELGGDHIDQPSGKSLHYNEDSVDIYFGLENSPKGDGHRGEVNPLISPRTMESMDI
YEELIREEQEEKQATYNELKQKFDDAQKQVNELLSKLQLLETKNSSLSSENVLLKKNICS
LVKTARMEIVRKDEEISRLSNRSSRGSYAQNFRRSQMENGPANSRHSLNNPSSSVLGLQG
DRQDNTMTELNQHKGRNTVSDHPAYPPTAAPQPFEVLQRCPRTDIESPLNCQNRSAETLT
VQPEQDYGLYRTSGIIKNPSTVADVLNAPKTNNSGPRAPDTSTDCRFSSLKGNKNPPSKH
IGSLEKTQNCTITEKELAKDSSGSNENRNQQPEVTVVRTSSEHLISPSSLSHKALPPVSS
QPSKSSVKTAADVESETQSQGHMHNQNAEKNSRDARHSGLRSTDCTVVDEESHSQNHKCK
KTDSSSHRRNENKSSSTTRRSSRMERSKDHEQKRPKESERSKRGEGNSCSSSRERSSNIS
DNSKEYSRRSTKEMANKDEDKRSKKQVDVFDSRQAFSSPKLDSQRKDVNKGKSSRRIDEP
STKSKRSHCYDNSRMEDLKFPDKNGSTGKNGFEEKDIVKDRERKRGGHLKEHGVQKHGES
KHFLTKDDRKNSCKKHKNPRKDQDSKTQKDKHTEKDKRTEKDKHLESVQAELPSVVAVSI
DPCQTSKDNSPDRKLSFMETLNLTLSPLKKQKQSSESTEAIEAASEDASSYNSRLSNAGE
EFYVIDELKNSQQSDEDMEKTPEATTAGEKEDFTSSFKQSRQVVDLFTAVASEKPSAEQT
DMEVQEENATESQEAVDKVPWLVNTSEEKRGKTSDSNVLDKDLLSKLTPTRASPNHVCEN
DTEDSLGIINNAIVSITLPSKISEVVVSDNTPDSIVDGCQQQDHFATLSEETSHMEIQRN
PQANSQDLLPASKEICQDDVSCSEKAQSIPNINYSGRSVNVEVSSSTISVDQGDPSKVIC
DVEQVGTSKEDNKRAEETFEYSKSIKTQHTSENLKISEKSHQSPLWSQNTMAPNNSTTVE
EDIMPSSQPGFLEPDSTEKEEQDTKSLNPVVFCHDEDSMMLTLRNIRVIPEPISPLTSPV
RQVKKVQPQPAEKQPHVKSLHKDLSTVTTGSDKDEVNMDMNKENKSPDSSVTASSYKGTK
DTLSASGTEEDELEDGEIVSESEEEGPLFIQTPPREKEKPTSGTPSPKISAVRKRVSQKK
TCAPAKYSEQSKFSRSSASKDSPTSSKRRFKTVSPPFKAAVYTLDGFMDMLGSIRVELRK
KYMKLQKNVTKTAFCCIVEMSHASFTEFINAVDMDKLCCQGNDIKVRLNKIISSIMSKVS
KNGIVNRIFEQRAGDLKQKLWTFVDGQFDFLFKELKMALKSESEPSKNISNENKNATLKR
KEDESEVLGKVPCSTPGHLYLAKKSKVDTGSFVREAPANNLPRRGLGSRGKNIKAVMNED
DQPAKVTTSQQLPTSSSERSFQKGTSESDNRISSYVRRLSHNGSIQDKSDFEILTEQQTS
SLTFNLVSDSQMGEIFKCLLQGSDLLESSVPVGDNTSWPLSTPRKDGLPGDSLIGIMTPN
KTTPSKLITSWSSISPYKFASNSKMLLDPAILDESCLLEVPSNSEPCQLPVQSTVISQRS
FSILAEDLAVSLTIPSPLKSDSHLSFLHPGTGQPLSVPESVLSAHYSEDALLDGEDATEQ
DIHLSLDTDNSSSGSSPIRTWEGSDPSGFQFQPNLQMQAVVMERSNDHFIVRIRRTSTGP
IESKQNEGKAVPALPECLEPSLNPNLALTHDDLGPEPGEMLNKSPTKVIESCHIEDKARE
AQQSSQKSSPEGACDDNLSRSNTAPVSIEAFVTAPEESSATEAETTEMMSGNVKNTTQSP
SAPESKSKRVSKKRKEHQSEHQSEPKAKRQKVEEFQDKHSKSRHKKRSKSSKEKGVKTAM
PQVSPSSLSAKNVIRKKGEVVVAWTRDEDRDILIELKMKGTSPKTFAALSKRLKKSTEQV
EERFSQLMKLFKKKEKMEN
NT seq
6000 nt
NT seq
+upstream
nt +downstream
nt
atggattttatggatgaacttggtggagatcatattgatcagccctcaggtaaatctctg
cattacaatgaggactcggtggacatttactttggcttggagaacagccctaagggtgat
ggacacagaggtgaagtcaacccgttaatttccccacggacaatggaatcaatggatata
tatgaggaacttatcagggaagaacaagaagaaaagcaggcaacatacaatgagttaaag
caaaaatttgatgatgcacaaaaacaagttaatgaactgctctcaaagttacagctactg
gagacaaagaattcaagtttgagcagtgaaaacgtacttctgaagaagaacatttgttct
ctcgtcaagactgctagaatggagattgtgcgtaaggatgaggagattagcagactcagc
aataggtccagtcgaggaagttatgctcaaaatttccgtcgatctcaaatggaaaatggt
ccagcaaactcaaggcacagtttgaacaatccttcaagttctgttttaggattacaaggt
gatagacaagataatactatgactgaattaaatcaacacaagggcagaaacactgtgtcg
gatcaccctgcatatccgccaactgcagcaccacaaccatttgaggtgctccagagatgc
ccaagaactgatattgaaagtcctctgaactgtcagaacagatctgctgagaccctgact
gtccaaccagagcaagactacggactttacagaacatcagggattataaaaaatccctcc
acagttgcagatgtcttgaatgctcccaaaacgaataactctggaccgagagctcccgat
acaagtactgattgtcgattcagtagcttaaagggaaacaagaaccctccctcaaaacat
ataggcagtctagaaaaaacacagaattgcacaatcactgaaaaagagcttgcaaaagat
agttctgggtctaatgaaaacagaaatcagcagcctgaggttacagtcgttcgtactagt
tcagaacacttgataagcccttcctccctgtctcacaaagccttgccacctgtctcttca
cagccatccaaaagttcagttaagacggctgcagatgtggagagtgagacacagagtcaa
ggacacatgcataatcaaaatgcagaaaaaaatagcagagacgctagacactctggcttg
agaagtacagattgtactgtggtggatgaagaaagccattcccaaaaccacaaatgtaag
aaaacagattcaagtagccatagaaggaatgagaataaaagttccagtacaacgaggagg
agcagcagaatggaaagaagcaaagaccatgaacaaaagaggccaaaggagagtgagagg
agtaaaagaggtgagggtaacagctgcagtagtagtagagagagaagcagtaacatatca
gacaatagcaaagagtattcgcgaaggagtacaaaggagatggctaataaagatgaagat
aaaagatctaagaaacaagttgatgtctttgacagtaggcaagccttttcttctcccaaa
cttgattctcaaagaaaggatgttaataaggggaaatcatcgaggagaatcgatgagcca
tcaacaaaaagcaaacgttctcattgctatgataattctagaatggaggatttgaaattc
ccagacaaaaatggaagtactggaaagaacggttttgaagagaaggatatagtcaaggac
agagaaagaaaaagaggtggacatttgaaggagcatggggtgcagaagcatggagaatca
aaacattttcttaccaaagatgacagaaagaactcttgtaaaaaacacaaaaatcccaga
aaagatcaagatagtaagactcaaaaggacaaacatactgaaaaggacaaacgtactgaa
aaggacaaacatcttgaatctgttcaagcagagttaccatcagtggtagctgtcagcata
gacccctgccaaacatccaaggataatagtccagacagaaaactgagtttcatggagacg
ttgaacctcaccctatcgcctcttaaaaaacagaagcagtcctctgaatccacagaagcc
attgaagcagcatctgaagatgcctcctcatataacagcagattatccaacgctggggag
gaattctatgtcatcgatgaattaaagaacagccagcagagcgatgaggacatggaaaag
acccctgaggccacgactgcaggtgaaaaagaagactttaccagttctttcaaacagtct
agacaagttgttgatctcttcacagctgtagcctctgagaagccgtcagcagaacaaaca
gatatggaggtacaagaagagaatgccaccgaaagtcaagaggctgtggacaaagtgcca
tggcttgttaacacctcagaggagaaaagaggcaagacttcagattccaatgtgttagac
aaagacttgttatcaaaattaacccctacgagagcgtctccaaatcatgtctgtgagaat
gacacagaagactctttgggaattattaataatgccattgtctctatcactttgccctct
aaaatatcagaagtggtagtttcagataatactcctgattcaatagttgatggttgtcag
caacaagatcattttgccactttgtctgaggagacttctcacatggaaatccaaaggaat
cctcaggccaactctcaagatttattaccagcatcaaaagagatttgtcaagatgatgtt
tcatgctctgagaaggcacaaagtattcctaatattaattattctgggagatctgtcaac
gtggaagtttcgtctagtacaattagtgtagatcaaggtgacccgagcaaagttatttgt
gatgttgagcaagtgggcacttcaaaagaggacaataagagagcagaggaaacatttgaa
tattcaaaatcaattaaaacacagcacacatctgaaaatttgaaaatatctgaaaaatcc
catcaaagtccattatggagtcagaacacgatggctccaaataatagcaccactgtggaa
gaggatatcatgccatcatcacaacctggtttcttagagccagattccacagaaaaagaa
gaacaggacacaaagtcattgaaccctgttgtgttttgccacgatgaagactccatgatg
cttaccctgaggaacatcagagttattccagagcccatcagccctctcacaagcccagtc
cgtcaggtgaaaaaagtgcaacctcagcctgctgagaagcaacctcatgtcaaaagtctt
cacaaagatctatcaactgtaacaactggcagtgataaggatgaagtaaatatggacatg
aacaaggagaataaatcacctgactcttctgtcacagcttcttcctacaaagggacaaaa
gatactctctcggcttctggaactgaggaagatgagctggaggatggtgagatagtgagt
gagagtgaagaagaaggacctctgtttatacagactcctccaagagaaaaggaaaaacca
acctcagggactccaagtccaaagatatctgcagttcggaaaagagtgtcccaaaagaaa
acttgcgcccctgctaaatattcagagcaaagcaagttttcaaggtcgtctgcttctaag
gacagtcccacctctagtaagagacgctttaaaactgttagcccaccattcaaagcagcg
gtctatacgctagatggatttatggacatgttgggatctattcgagttgagttgaggaaa
aagtacatgaagcttcagaaaaatgtcactaagactgccttctgctgtatagtggaaatg
tctcatgcctcttttacagaatttatcaatgcggttgacatggataaattgtgctgccaa
ggtaatgacatcaaagttagactaaataagattatttcgtcaataatgagcaaggtcagc
aagaatggcatcgtcaatcgtatctttgagcagagagctggagacctcaagcaaaagttg
tggacatttgtggatgggcagtttgatttcttgttcaaggaactgaagatggcactcaaa
agtgagtctgagccttccaagaatatatcaaatgaaaataaaaatgcaacccttaaaaga
aaagaggatgagagtgaggtgctaggaaaagtaccatgtagcacacctgggcatctttac
cttgccaagaagtcgaaagttgacacaggaagtttcgtcagagaggcccctgcaaataat
ctgcctcgcaggggccttgggagccgaggtaaaaacattaaagctgtcatgaatgaagac
gatcagccggcaaaggtgacgacatcacaacagcttcctacttcatcctctgaaaggtct
ttccaaaaaggtacctcagaatctgacaatagaatctcttcctatgtccgacgtctctcc
cataatggatcgattcaggataagtcagactttgaaattctaactgagcagcagacatca
agcttaaccttcaacttggtctctgactctcaaatgggagagatattcaaatgtcttttg
caaggttctgatttgctcgaatccagtgtacctgttggtgacaatacaagttggccactc
agcacacctcgaaaagatgggcttccaggagatagtttgattgggattatgacccctaac
aagacaaccccatctaaattaatcacatcctggtcttccatttccccctacaagtttgct
tcaaacagcaaaatgctgttagacccagcaattctcgatgagagctgcttgttagaagtt
ccctctaattctgaaccatgccagcttcctgttcagtcaaccgtaatctctcaaaggtcc
ttctccatcttggcggaagatctagctgtctcccttaccattccctcaccattaaagtct
gatagccacttgagttttttgcaccctggaactggacagccattatctgtcccagagagt
gtcctcagtgcccattatagtgaagacgctcttcttgatggagaagatgccactgaacag
gacatccacctttctcttgacactgacaactccagtagtgggtcgagtcccatcaggaca
tgggagggctctgatccatcgggtttccaattccaacctaatttacaaatgcaggctgtg
gtaatggagaggtcaaatgatcatttcatcgtgcgaataagacggacatctactggccca
attgaaagtaaacaaaatgaagggaaagcagtaccagcattacctgaatgtttagagcca
tctctcaaccctaatcttgctctgacccatgacgacttgggtcctgaacctggagagatg
ttgaacaaaagccccaccaaggtaatagagtcatgtcacattgaagataaagcaagagaa
gctcaacagtctagccaaaaatcctcacctgaaggtgcttgtgatgacaacttgtccagg
agcaatactgcgcctgtttccatagaagctttcgttactgctcctgaggaaagcagtgca
acagaggctgaaaccacagagatgatgtcaggaaatgtaaagaacacaactcagagccca
agtgcaccagagtctaaatccaagagggtgtcaaagaaacgcaaggagcaccaatcggaa
caccaatcggagccaaaggcaaagcgccaaaaggtcgaagaatttcaagataaacattcc
aagtccaggcataagaaaaggtcaaaatcctccaaagaaaaaggcgtaaaaactgcaatg
ccccaggtgtcccctagcagcctgtctgctaagaatgtgatcaggaagaaaggggaagtg
gtggtggcatggaccagggatgaagatcgagacatactcatcgagcttaaaatgaagggg
acttcacccaagacatttgctgctctgtcgaaaaggttgaagaagtcaacagagcaggtt
gaggagcgattctctcaattgatgaagctattcaagaagaaagagaaaatggagaattga
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integrated database retrieval system