Pimephales promelas (fathead minnow): 120493888
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Entry
120493888 CDS
T08155
Symbol
nup93
Name
(RefSeq) nuclear pore complex protein Nup93 isoform X1
KO
K14309
nuclear pore complex protein Nup93
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120493888 (nup93)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pprm03019
]
120493888 (nup93)
Messenger RNA biogenesis [BR:
pprm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
120493888 (nup93)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nic96
Motif
Other DBs
NCBI-GeneID:
120493888
NCBI-ProteinID:
XP_039548736
LinkDB
All DBs
Position
Unknown
AA seq
820 aa
AA seq
DB search
MDTEGFGELLQQAEQLAAETEAVSELPHVERNLQEIQQAGERLRSRTLTRTSQDTADVKA
SILLGSRGLDIFHISQRLESLSAATTFEPLEPVKDTDIQGFLKNERDNALLSAIEESRRR
TFLLAEEYHRDSMLVQWEQVKQRVLHTMLGAGEDALDFSQEVEPSFVSEVAVPGRSALDS
VEVAYSRQIYIFNEKIVNGHLQPNLGDLCASVAESLDDKNVSDMWLMVKQMTDVLLVPAK
DTLKSRVSVDMQMAFVRRALQFLENSYKNYTMVTVFGNLHQAQLGGVPGTYQLVCSFLNI
KLPTPLPGMQDGEVEGHSVWALIYFCLRCGDLSAAMQVVNRAQHQLGDFKIWFQEYMNSP
DRRLSPATENKLRLHYRRVLRNSADPYKRVVYCLIGKCDIADNHGEVADKTEDYLWLKLN
QVCFDEDGSSSPQDRMTLAQLQKQLLEDYGESHFSASHQPFLYFQVLFLTAQFEAAIAFL
FRVERLRSHAVHVALVLYELKLLLKSSGQSAQLLSQEAGDPPMVRRLNFIRLLMLYTRKF
ESTDPREALQYFYFLRNEKDSQGENMFMRCVSELVIESREFDMLLGRLEKDGSRKPGVID
KFAGDTRAIITKVASEAENKGLFEEAVKLYELAKNSDKVLELMNKLLSPVIAQVSEPQSN
KERLKNMAVAIAERYRTNGIAGEKSVDSTFYLLLDLMTYFDEYHAGHIDRAYDVIERLKL
VPLSQDSVEERVAAFRNFSDEVRHNLSEVLLATMNILFTQYKRLKGAAAGTPGRPQRALE
DRDTLLRSQARALITFAGMIPYRMAGDTNARLVQMEVLMN
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atggataccgagggcttcggggaactcctgcagcaggcagaacagcttgcagcagagact
gaggcagtgtcggagttgccccatgttgagcgaaacctacaggagatccagcaagcagga
gagcgactacggtcccgcactctcaccagaacctctcaagacacagctgatgtaaaagcc
tccatcctcctgggctctcgtggtcttgacatcttccatatctcccagcgtcttgaaagt
ctcagtgcagccactacatttgagcctcttgagccagtcaaggacacagatattcagggc
tttctcaagaacgagagagacaatgcactgctgtcagccatcgaggaatcacgccgcagg
acgtttctgttggcggaggagtaccacagagactctatgttggtgcagtgggagcaggtg
aagcagagagtgttgcacaccatgctgggagctggagaggacgcactggacttcagccag
gaagtggagcccagtttcgtgagcgaggtcgcagttccaggacgcagtgcactggacagt
gtggaagttgcctacagccgacagatctacatcttcaatgagaagatagtaaatgggcat
ctccagcccaacctgggagatctctgtgcatcagtggccgaaagcctggatgataagaac
gtttcagacatgtggctcatggtgaagcagatgacagatgttttgttggttccggcaaag
gacactctgaagagtcgagtgtctgtggacatgcagatggccttcgtcagacgagctcta
cagttcctggagaacagctataaaaattacaccatggtcactgtttttgggaatctgcac
caggctcagttgggcggtgtacctggcacttatcagctcgtatgcagcttcctaaacatc
aagctgccgaccccgctgccaggcatgcaggacggcgaggtggagggacattcagtgtgg
gctctgatctatttctgcctgcgttgtggagacctgtctgccgccatgcaggtggtgaac
agggcacagcatcagctgggagactttaagatctggtttcaggagtacatgaacagcccc
gaccgacgtttgtctccagccacagagaataaactacgacttcattaccgacgtgtgctg
aggaacagcgccgacccctacaagcgtgtggtctactgcctcattggtaaatgcgacatc
gccgacaaccatggagaagtggccgacaagaccgaggactacctgtggctcaagctgaat
caagtgtgttttgatgaggacggtagcagctcccctcaggacagaatgactctggcacaa
cttcagaaacagctactggaagactacggtgagtcccatttctcagccagccaccagcca
ttcctgtacttccaggtgcttttcctgacggcacagtttgaggcagccatagcgttcctt
ttccgagtggagcgtctgcgcagccatgcagttcacgtagctctggtgctgtatgaactc
aaactgctgctcaaatcatcaggccagagcgcacaactcttgagtcaagaggctggagat
cctccaatggtgcgaaggctgaacttcatcaggctgcttatgctctacacccgcaagttt
gagtccactgacccacgagaggctctacagtacttctacttcctccggaatgagaaggac
agtcaaggagaaaacatgttcatgcgctgtgtcagcgagctggtcattgagagtcgggag
tttgatatgcttcttggaagactcgaaaaagatggaagcagaaagcccggcgtgattgac
aagtttgccggagacacgcgggccatcattaccaaggtagcctcggaggccgagaacaag
ggattgtttgaggaggccgtcaaactgtacgagttagccaagaactctgataaggtcctg
gagctgatgaacaaactgctgagtccagttattgctcaagtcagcgagccccagtccaac
aaagagcgactcaaaaacatggcagtggctattgctgaaaggtaccgtaccaacggcata
gctggggagaagtctgtggacagcacattctacctgcttctggacctcatgacgtacttt
gatgagtaccatgccggccacatagaccgagcctacgatgttattgagaggctaaagttg
gttcctctaagtcaggacagtgttgaggaacgagtcgcggccttcagaaacttcagtgat
gaggtcagacataatttgtcagaggttcttctggccacaatgaatatcctgttcacgcag
tataagcgtctaaagggggctgcagcaggcacaccaggaagaccacagcgtgccctagag
gacagagacacgctgctgcgcagtcaagccagggctctgatcacgtttgcgggaatgatt
ccgtatcggatggctggagataccaatgccagattggttcagatggaggtcctaatgaac
tga
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