Pimephales promelas (fathead minnow): 120493927
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Entry
120493927 CDS
T08155
Symbol
adamtsl7
Name
(RefSeq) thrombospondin type-1 domain-containing protein 4 isoform X1
KO
K23377
thrombospondin type-1 domain-containing protein 4
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
120493927 (adamtsl7)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pprm04990
]
120493927 (adamtsl7)
Domain-containing proteins not elsewhere classified [BR:
pprm04990
]
Thrombospondin domain-containing proteins
ADAMTS-like proteins
120493927 (adamtsl7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP1_ADAMTS
ADAMTS_spacer1
TSP_1
TSP1_CCN
TSP1_spondin
PLAC
Motif
Other DBs
NCBI-GeneID:
120493927
NCBI-ProteinID:
XP_039548858
LinkDB
All DBs
Position
Unknown
AA seq
649 aa
AA seq
DB search
MACEMQLPTWSGHQWRLIQHFLQMTLLLALLCPPAEPVPWDNDFSSGPGEGCEGFQVDVC
GVCAGDGSSCELFSGTLFLSVLSVGYHKILDIPSGAQRIKIQETQKTRNYLALRTASGES
VINGNWVIDRPGYFYAVGTQLTYKRPNEIRSRAGESITAPGPTNQELHLFVIYQQPNPTV
YYEYILPKDPITDTYSDAYSYSSVLPLVESHGMFPDPENSDGTSSMGSPHPNQVPSDPIT
PEPVPQYSWVATKTTPCSATCGTGSRQVVFSCVERATQTTVPGDLCSYTSPPGPQVEECR
SQPCPAFWDVGEWSECSKTCGPGFQYRQVICRQTQGHHGNSTVIVATSLCDDTEMPETTT
VCQLKICSEWQIRSEWTECSVPCGVGQRRREVVCVDNLGDIVSDEECNMALRPLDLQNCD
KGVCASSWFYSLWSDRCSADCGEGSRSRSVVCMMSQTNSLPLDNCDDEDKAEELMPCDLG
PCSQRLEWYTGPWGQCSSECGNGTQSRGVVCVLQNNDQLEVTSDERCSHLPLPPSGQTCY
LKSCGAQWYMTEWSSCSRSCDGGFRVREVRCLQDELTTSHDCDPALEPANHENCNTHICT
PQIDESCRDLYYNCVVVVQARLCVYSYYRTTCCASCSRVIQRDTLHRIR
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atggcttgtgagatgcaactgccgacctggagcggacaccagtggagactgatccagcat
ttcctccagatgaccctattgctcgccctcctgtgcccacccgcagagcctgttccctgg
gacaatgacttcagcagtggccctggagagggctgtgagggtttccaggtggatgtatgt
ggtgtgtgcgcaggggatgggagctcatgtgagctgttcagtgggacactctttctttct
gtgctctctgttggttaccacaagatcctggacatcccctctggagctcaacgaatcaaa
atacaggaaacacagaagaccaggaactacttagctctcaggacagcgagtggtgaatca
gtgataaatggtaactgggtaatcgacaggccaggatatttctatgctgtgggtactcag
ctcacatacaaacggcccaatgagatacgcagcagagcgggagaatccatcactgctcct
ggcccaaccaatcaggagctgcatctctttgtgatttatcaacagcccaatccaacagtg
tattatgaatacattctacccaaagaccccatcaccgacacttactcagatgcctattct
tattctagtgtacttcctctggtagagagtcatggaatgtttcctgatcctgagaatagt
gacggtacaagctcaatgggcagccctcatcctaaccaagttccttcggaccctataacc
cctgaaccagttcctcaatacagctgggttgccacgaaaacaacaccctgcagtgccacc
tgtggaacaggcagtcgtcaagttgtgttcagctgtgtggaaagggccactcaaaccact
gtaccgggggatctctgtagctacaccagtccgcctggcccccaggtagaagagtgtcga
tcgcagccttgtccagccttttgggatgtaggggagtggtctgagtgcagtaagacctgt
ggtccaggtttccagtatcgtcaggtgatttgccggcagacgcagggacaccatggcaat
agcacagtcatcgtggcgaccagcctctgcgacgacacagagatgccagagacgaccact
gtgtgccagctcaagatctgcagtgagtggcagatccgctcagagtggacagagtgctct
gtgccgtgtggagtagggcagcgcagaagagaagtcgtgtgtgtggataacctgggtgac
atcgtttccgatgaggaatgcaacatggcgcttcgccccctggacctgcagaactgtgac
aaaggagtgtgtgccagcagctggttctattctctctggagtgataggtgctccgcagac
tgtggggaaggaagtcgcagccggtcagtggtgtgtatgatgagtcagaccaactcgctt
ccactggacaactgcgatgatgaggataaagccgaggagctcatgccgtgtgacctggga
ccctgctcacagcgactggaatggtacacgggaccctggggacagtgctcgtctgaatgt
ggcaatggtacccagagtcgaggtgtggtctgtgttctccaaaacaatgaccaattagaa
gtcacctcagatgagcgctgctctcatctgccccttcctccgagcggacagacctgctat
ttgaagagttgcggtgcgcagtggtacatgacggagtggagctcgtgttctcgttcctgc
gacggaggctttcgagtgagggaggtacgttgtttgcaagatgaactgaccacaagccat
gactgtgatcctgcccttgaacctgcaaatcacgaaaattgtaacacacacatctgcacg
ccacagattgacgagtcctgcagggatttgtactataactgtgtggtggtggtccaggct
cgtttgtgtgtgtactcatactaccgcaccacatgctgtgcatcatgctctcgggtcatt
cagagagacacgctgcatagaatcaggtga
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