Pimephales promelas (fathead minnow): 120493961
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Entry
120493961 CDS
T08155
Symbol
rbl1
Name
(RefSeq) retinoblastoma-like protein 1 isoform X1
KO
K04681
retinoblastoma-like protein 1
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04110
Cell cycle
pprm04218
Cellular senescence
pprm04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
120493961 (rbl1)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
120493961 (rbl1)
04218 Cellular senescence
120493961 (rbl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprm03000
]
120493961 (rbl1)
Transcription factors [BR:
pprm03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
120493961 (rbl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RB_A
RB_B
DUF3452
TFIIB
Rb_C
Motif
Other DBs
NCBI-GeneID:
120493961
NCBI-ProteinID:
XP_039548916
LinkDB
All DBs
Position
Unknown
AA seq
1055 aa
AA seq
DB search
MRGDETDSESVKSDDGSIRRNLDALCQELNMDEETAAEALQNFSSIWNTYTLEGDVAHWL
ACSLYVACRKGSIPTVGRGVMEGNCVSLTRILRSAKLSLIQFFSKMKKWSDMSNLSQDFR
SRIGRLERNFEVSTVIFRKFEPIFLDMFQNPQGEPPRLPRSRKHRRLPCHVSDVFKFCWT
LFVYTKGNFRMIGDDLVNSYHLLLCCLDLVFCNALMCSNRKDLINQHFRGLPKDTENLEE
MPCVIDKLCELHDGLVVEAKGIKEHYFKPYIKTLFEKKILKGDVDTLTELLDTPNFQDNN
KAVNREYEEYVLTVGDFDERVFLGADADEEIGTPRKSTADPPSGQLSARMQVENNLQQHF
EKTRSLAPSTPLTGRRYLKEKEVLVTPVSSATQSVSRLQSMVSGLRNAPSDALVQIFNSC
SRNPTESILNRVKTMGEIFKQAYTKPTDDLPGAHMDFAENRLKLAEILYFKILENIMTLE
MKRLQGKDMSVLLEQEVLHCSLLACCLEVVLFAYSSQRTFPWILEILQIPPFYFYKVIEV
FIRSEEGLSRDMVKHLNSIEEQVLESRAWTRDSALWNALNKSNNKVPTVEEVNFSNSFDT
GNNAGGPTHLPLVALSPIIHPRIREVRTGLGSSARKDVPQSPLSLHDRYSSPAAGSAKRR
LFGDDAPPQSPVKRISVTPIKIIPNSTENNQNTTATTTVLSMATINGQQLTIPLPMMKNE
MGGITVIQLQANEMNPLTGHVLLTSSSPSRTAAPPASSDTQPVATSKPRRTGSLALFFRK
VYHLASVRLRDLCLKLDISSELRGKIWTCFEHSLLHCTDLMKDRHLDQLLLCAIYIISKI
TKEEHTFQDIMKCYRTQPQAHSHVYRSVLLKRRPREQQADENMEVDPPADQCKNEVVVPA
ANERMEQADSESEDRGDLIQFYNSVYVLKMKSFALKYAHSTLDNKMEAPPLSPFPSVRAQ
PLSPRRVSQRHSIFVSPHKNGSSLTPSAYTYKFTGSPSKELSDINQMIRQGGVSKKRAFT
MDGDETESPSKCLRQENDDVLLKRLQDVVSERASL
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atgcggggagatgaaactgattcggagtcggttaaatcggacgatggctcgatacggagg
aatctcgatgcgctttgtcaagagctcaatatggacgaggagacggcagccgaagcgctc
cagaacttcagctccatctggaacacgtacacgctagagggtgatgtcgcgcactggctg
gcctgttctctgtatgttgcctgtaggaagggctctatccctacagtgggacggggcgtg
atggagggcaactgtgtttcccttaccaggatcctgcgctcagccaagctcagtctgatc
cagttcttcagcaagatgaagaaatggtcggacatgtcgaacctctctcaggatttccgc
agccgcataggtcgactagagcgcaatttcgaagtgtcgacagtgattttccgaaaattt
gagccaatatttctggacatgtttcagaatcctcagggcgaacctcctcgcctgcctaga
agccgcaaacaccggcgtcttccatgccacgtcagtgacgtcttcaagttctgttggact
ctctttgtgtatacaaaaggtaatttccgcatgattggagatgacctggtaaactcctat
cacctcctgctctgctgtctggacctggtgttttgcaacgctctcatgtgctccaatagg
aaagatctcatcaatcaacacttcagaggactgccaaaggacacagaaaacttggaggag
atgccctgtgtcattgacaagttgtgtgaactgcatgatggtttggtggtggaggccaaa
ggcataaaggagcactacttcaaaccctacataaagacactgtttgagaaaaaaatatta
aaaggtgatgttgacactctgactgaattactggacaccccaaatttccaagacaacaat
aaagccgtaaatcgtgagtatgaggaatatgttttgactgtgggggattttgacgagcga
gtgtttttgggggccgatgcagatgaggagatcggcacacctcgcaaatccactgctgat
cctccttcaggtcagctatctgcccgcatgcaggtggagaacaaccttcagcagcacttt
gaaaagacacgatcccttgctccctctactcctctaacgggtcgacggtatttgaaggag
aaagaggtgctggtcacccccgtttcctcagccacgcaaagcgtgagccgactgcagagc
atggtgtccggcctacgaaacgcaccgagtgatgctctggtccaaatatttaattcctgc
tctcgaaatcccactgaatccattctgaaccgagtgaagaccatgggagagatatttaaa
caggcctacaccaaacccacagatgacctgccaggagcacatatggatttcgcagagaat
cgtctgaagctggcagagatcttgtacttcaagatcctggagaacatcatgactctggag
atgaagagattacagggcaaagatatgtcggtcctgttagagcaggaggtgctccattgc
tctctgttggcgtgctgtctggaggtggtgctgtttgcgtacagctctcaaagaactttc
ccatggatattggaaatcttacagatcccacctttctacttttacaaggtgattgaggtg
ttcatccgctctgaggagggtttgtcccgagacatggtgaagcatttgaacagtatcgag
gagcaggtgctggaaagcagagcctggactagagactcggccctgtggaacgcgcttaac
aaatctaacaataaagtccctactgtggaagaggtaaatttttccaatagttttgacacg
ggcaacaatgcaggcggtcccactcacctgccgttggtagcgctatcccccatcatacac
cctcgcattagggaggtccgcacaggcctgggctccagcgcacgcaaagacgtccctcaa
tctcccctctctctccacgatcgctacagctctccagcggctggcagcgctaagaggcgc
ttgtttggtgacgacgctccaccacaatccccagtgaaaagaatctcagtcactcccatc
aaaatcatccccaactccacggaaaacaaccagaacaccaccgccacaacgactgtcctc
tccatggcaaccataaacggccagcagctcactattccactgccgatgatgaaaaacgag
atgggcggcatcacagtcatccaacttcaggccaatgagatgaaccctctcactggccat
gtcttactgacctcctcctcccccagccgaaccgcagctccacccgccagctccgacaca
cagcctgtggcaaccagcaaaccccgccgcactggatccctcgcgctattcttcaggaag
gtgtatcatttagccagcgtgcgtctgcgagacctgtgtctgaagctggatatctcctca
gagctgcgagggaagatctggacgtgtttcgagcattctctgctgcactgcactgacctg
atgaaggaccgacacctggaccagctgctgctctgtgccatctacattatatccaagata
acgaaagaagagcacacttttcaggacattatgaaatgctaccgaacccaacctcaggcc
cacagtcacgtgtaccgcagtgttttactgaagaggcgtcccagagagcagcaggcagat
gagaacatggaagtggatccaccagcagaccagtgtaagaatgaagtcgtcgtcccagca
gccaatgagaggatggaacaggctgacagcgaatcagaggatagaggggacctcatccag
ttctataactctgtttatgtgttaaagatgaaatcattcgctctcaaatatgcacattct
acgcttgataacaagatggaggctcctccgttatccccattcccatcggttcgggctcag
cctctctctcctcgccgtgtgtctcagagacactccatctttgtctctcctcataaaaac
ggctcgagtctcacccccagtgcctacacgtacaagttcactggcagcccatcaaaggag
ctgagtgacataaaccagatgatccgtcagggtggggtgagcaagaagcgggcgttcaca
atggatggcgatgagaccgagtctccatctaaatgcctgcggcaggagaacgacgacgtg
ctgctcaaacgcctgcaggatgtggtcagtgagagagcgagtctctga
DBGET
integrated database retrieval system
