Pimephales promelas (fathead minnow): 120493964
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Entry
120493964 CDS
T08155
Symbol
zcchc7
Name
(RefSeq) zinc finger CCHC domain-containing protein 7 isoform X1
KO
K12597
protein AIR1/2
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120493964 (zcchc7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pprm03019
]
120493964 (zcchc7)
03016 Transfer RNA biogenesis [BR:
pprm03016
]
120493964 (zcchc7)
Messenger RNA biogenesis [BR:
pprm03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
120493964 (zcchc7)
Transfer RNA biogenesis [BR:
pprm03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
120493964 (zcchc7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCHC
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
120493964
NCBI-ProteinID:
XP_039548935
LinkDB
All DBs
Position
Unknown
AA seq
598 aa
AA seq
DB search
MSQQRDHLEMFSGYQEREDYEDELYRDETDSGLSDADSELEFRLYSQLHYNAEIQEDRED
SREVQSSVPRTQPQQKSLPPAPPVDVIVIDSGPDTITVSDNTEEDDSVCANKGQSSKYWK
RKLHPNSLLSPCPPQVQTGRSSPDDIVLLDSESDESSSESIPPFVEDLDSDSDSDVLENW
MILGQEKQDEDQSIQLNISKLENPEHGNDGGNIQTWTISEKDKWAQIHNKGVGLRRVSNR
FSNRYYTEKSITCHNCRKTGHLSKNCPTPKKMPCCSLCGLQGHLQRTCPSRHCYNCSLPG
HTYDNCLEKARWHKCCHRCGMTGHFIDACPEIWRQYHLTTTSGPLNKSSDPEACRKPAYC
YNCSKRGHFGHECSQRRMYNGTYPTLPLITYYDTTKDINCRENRLKKKARDLKDAGLLTT
DGGGFTSTPQPPRKKQKTSHKQSPYPHNTHTNNQHTPKRRIAHTPKHHQHLSVKQNSQTP
GSHGKGKFIPQQQSQKEAKKKNKKKSSVIVLDEDADFPRGGKKGPHGTGFFSSPRKFNMK
LKKAFEIEKNNKKKTETKTKKKERKLKKRQKKAANDSSVYPSDENLFQIKQRKGKKRS
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaacaaagggatcaccttgagatgttctcagggtatcaggagcgggaggactat
gaggacgaactgtaccgggatgagacagactctggtttgtctgacgctgacagcgagctg
gagttccggctctattcccagctgcactacaacgctgagatccaggaggaccgtgaggac
tcgagagaggtccagtcatcagtaccacggactcagccacagcagaagtccttgcctcct
gctccacctgtagatgttattgtgattgactccggcccagataccatcacagtgtcagac
aacacagaggaagatgacagcgtttgtgctaacaaaggtcaatcatcaaaatactggaaa
aggaagttgcatcccaatagcttactttcaccctgtccaccacaagttcaaacaggaagg
agctctccagacgatattgtgctgttggattctgaatctgacgagagctcttctgaatct
atacctccttttgtggaggatctggattcggactcagactcagatgtactggagaactgg
atgattctgggtcaggagaaacaagatgaagatcagagcatccaactcaacatctccaaa
ttggaaaatccagaacatggaaatgatggcgggaatatacaaacctggactatatcagaa
aaggataaatgggctcagatccataataaaggggttggcctgaggcgtgtttcaaaccgc
ttctcaaaccgttactacactgaaaaatccatcacgtgtcacaactgcagaaagaccggc
catctctccaaaaactgccccacaccaaagaagatgccatgctgctcattatgtgggctt
cagggacacttacagaggacctgtccgagccgtcactgttataactgttcgctgcccggc
cacacctatgataactgtctggagaaagctcgctggcacaaatgctgccaccgctgtggc
atgaccgggcacttcattgacgcctgcccagaaatctggagacagtaccaccttacgacc
acttcgggacctctcaacaagtccagtgatccagaggcctgcaggaaacctgcctactgt
tataactgctctaagagaggacactttgggcatgaatgctcgcagaggagaatgtataac
gggacgtatcccaccctgcccttgattacttattatgacacaacaaaggacatcaattgt
cgggagaacagactaaaaaagaaggccagagatcttaaggatgccggattgcttaccacc
gatggaggcggttttacatctacccctcaaccgcccaggaagaaacaaaaaaccagccac
aaacagtctccgtacccacacaacactcacacgaacaaccagcacacaccgaagcgacgc
atcgcacacacgcccaaacatcaccaacacttgagtgtcaagcagaactcacaaacacca
gggagccacggcaaaggcaagtttataccacaacagcaaagccagaaggaagccaaaaag
aagaacaagaaaaaatcttcagttatagttttagatgaagatgcagactttcctagaggg
ggcaaaaagggccctcacgggacagggtttttttcgtctcctcggaaattcaatatgaag
ctgaaaaaggcctttgaaatagaaaagaacaataaaaagaaaacggaaacaaaaacgaaa
aagaaggagaggaaattgaaaaagagacagaaaaaagcagcaaacgattcttccgtgtat
ccatctgatgaaaacctttttcagattaaacaaagaaagggtaaaaaacgttcctaa
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