Pimephales promelas (fathead minnow): 120493983
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Entry
120493983 CDS
T08155
Symbol
parp1
Name
(RefSeq) poly [ADP-ribose] polymerase 1
KO
K24070
poly [ADP-ribose] polymerase 1 [EC:
2.4.2.30
]
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm03410
Base excision repair
pprm04210
Apoptosis
pprm04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
120493983 (parp1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
120493983 (parp1)
04217 Necroptosis
120493983 (parp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pprm03032
]
120493983 (parp1)
03036 Chromosome and associated proteins [BR:
pprm03036
]
120493983 (parp1)
03400 DNA repair and recombination proteins [BR:
pprm03400
]
120493983 (parp1)
Enzymes [BR:
pprm01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.30 NAD+ ADP-ribosyltransferase
120493983 (parp1)
DNA replication proteins [BR:
pprm03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
120493983 (parp1)
Chromosome and associated proteins [BR:
pprm03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
120493983 (parp1)
DNA repair and recombination proteins [BR:
pprm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
120493983 (parp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PARP
PARP_reg
zf-PARP
PADR1_N
WGR
Zn_ribbon_PADR1
BRCT
BRCT_2
ECR1_N_2
Motif
Other DBs
NCBI-GeneID:
120493983
NCBI-ProteinID:
XP_039548966
LinkDB
All DBs
Position
Unknown
AA seq
1014 aa
AA seq
DB search
MADSQDDKLYKAEYAKSGRASCKKCKENIAKDSLRMAIMVQSPMFDGKVPHWHHFSCFWL
RAAVQSPSDISGFTDLRWDDQDKVKKAIESGGATGGKGEQKGAAKGEKILNDFAVEYAKS
NRSTCKGCDQKIEKDHIRVSKKSVDPEKPQLGLIDRWYHTGCFVSRREELLFKPEYGATQ
LKGFGALRDEDKEELKKRLPAVKNEGKRKTDDVDGGVSKKQKKEDEKLELKLKEQSQLIW
GIKDKLKKFCSINDMKELLIANKQEVPSGESNVVDRLSDCMAFGSLKPCETCKGQLVFKS
DAYYCTGDISAWTKCVFKTQTPDRKDWVTPKEFSDIPFLKKFKFKRQDRLFPKDAPPATP
TPSSATVTSAVPSMSTSSSNNLSEVPADKPLTGLKLLAVGKLSKNKDELKTAVEELGGKI
TGTANKSALCISSKKEIEKMSKKMEEVRDAGVRVVAEDFLTDIKESGKALQELISLHSIS
PWGAEVKVEAQAASAASKSTGAHSSKSTGRVKEEKVESISKKMKLTVKGGAAVDPASGLE
DCAHVLDQNGKIYSATLGLVDIVRGTNSYYKLQLLEDDVQKRYWVFRSWGRVGTTIGGNK
LDKFYDKNSAMDNFCSVYEEKTGNSWASRNFTKHPNKFYPLEIDYGQDEEAVKLLTANAG
AKSKLAKPIQDLIRTIFDVESMKKAMVEFEIDLQKMPLGKLSKRQIQSAYSLLSEVQQAV
ADCSSEALILDLSNRFYTLIPHDFGMKKPPLLSNVDYIQQKVQMLDNLLDIEVAYSLLRG
GVEDNKKDPIDINYEKLKTKIEVVDKSSNEAELILQYVKNTHAATHNTYTLDVEEIFKID
REGEYQRFRPFKELPNRQLLWHGSRTTNYAGILSQGLRIAPPEAPVTGYMFGKGVYFADM
VSKSANYCHTSQADPVGLLLLGEVALGNMHELKKASHITKLPKGKHSVKGLGRTAPDPTA
TVSLNGVDVPLGKGVNTNIDDTSLLYNEYIVYDIAQVNLKYLLKVRFNYQSSLW
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
atggctgattcacaggacgacaagctctacaaagccgaatatgcgaaaagtggacgcgcc
tcttgcaagaaatgcaaagaaaacattgctaaggactcgctgagaatggccattatggtg
cagtctcccatgtttgatggcaaagtgcctcactggcaccatttttcctgcttttggctc
cgggctgctgtacagtcaccctctgacatatctggatttactgacctgcgctgggatgac
caggataaagtgaagaaagccattgagagcggtggtgctactggagggaaaggagagcag
aagggagcagctaaaggggaaaagatactgaatgactttgcagtggagtacgccaaatcc
aacagaagcacctgcaagggatgtgatcaaaagattgaaaaggaccacatccgtgtgtca
aagaagtccgtggacccagagaaacctcagcttggtctgatagatcgctggtaccacact
ggctgctttgtgagccgtcgtgaggaactattgtttaaaccagagtacggtgccacccag
ctcaaaggtttcggagctctacgagatgaagacaaggaggagctgaagaaaagacttcct
gcagtgaagaatgaagggaagagaaagacagatgatgttgatggaggagtgtctaagaaa
cagaagaaagaagatgaaaaactggagctgaaactgaaggagcaaagccagctgatctgg
ggaattaaagacaagctaaagaagttctgctccatcaatgacatgaaggaactgcttatt
gctaacaaacaggaagttccctctggggagtcaaatgttgtggaccggctatcagattgc
atggcgtttgggtccttgaagccttgtgagacttgcaaaggacaacttgtgtttaagagc
gatgcatactactgtactggagacatctctgcatggaccaagtgtgtattcaagactcag
acacctgatcgcaaagactgggtcactcctaaggagttcagtgatattcccttcctgaag
aagtttaagttcaaacggcaggaccgtttgtttcccaaagatgctcctcctgcgaccccc
accccctcgtctgctaccgtgacctcagccgtcccgagcatgtccacttcctccagtaac
aacctctcagaggtgcctgcagataagcctctgacaggactgaagctgctggctgtggga
aaactaagcaagaacaaagatgagctgaaaactgcagtggaagaactgggaggaaaaatc
acaggcactgccaacaaatctgctctctgcatcagcagcaagaaggagattgaaaaaatg
agcaagaagatggaggaggtgagggacgcaggtgtgcgtgtggtggcagaggacttcctc
actgacatcaaggagtcgggcaaggccctccaggagctcatctccctgcacagcatctcc
ccttggggtgctgaagttaaagtcgaggcccaggctgcaagcgcggcctccaaatccact
ggagctcattcctcaaagagtactggcagagtcaaagaggaaaaagttgaaagcatatca
aagaaaatgaaactgacagtgaagggaggggcagctgtagatcctgcctcaggtctggaa
gactgtgctcacgtcctggatcagaatgggaagatttacagcgccacactgggtctcgtg
gacattgttagagggacaaattcatactacaaattacagttgctggaggatgacgtccag
aaacgatactgggtgttcaggtcatggggtcgagtcggcaccaccattgggggaaacaaa
ctggacaagttttacgataagaactctgctatggataatttttgcagtgtgtatgaggaa
aaaacagggaattcctgggcctcaagaaacttcacaaaacaccccaataagttttaccct
cttgagattgactacggacaggatgaggaggctgtaaagttgttgactgcaaacgcaggc
gccaaatccaagttggccaaacccatccaagacctcatccgaacgatctttgatgtagag
agcatgaagaaagccatggttgagtttgagattgacttgcaaaagatgcctttgggaaaa
ctaagcaaacgacagatccaaagtgcctattcccttctgagcgaggtccaacaggctgtg
gctgattgctcttcagaagcactgatcttagacctgtccaatcgcttctacacactaata
cctcatgacttcggcatgaagaagccaccgctgttgagtaacgtggattacatacagcaa
aaggtgcagatgctggacaacctgttggacatcgaggtggcctacagcctgctacgggga
ggagtggaggacaataagaaagatccaattgacattaactatgagaaactcaaaaccaaa
attgaggtggtcgacaagtcatcaaatgaggctgagcttatactgcaatatgtgaagaac
acacacgctgctactcacaacacctacacactggatgttgaggagatctttaagatcgac
agggagggtgagtaccagcgtttccgccccttcaaagaattacccaaccggcagctgttg
tggcacggctcccgcaccaccaactacgcgggtatcctgtctcagggtctacgtatcgct
cctcctgaggctccagtgacaggttacatgtttggcaaaggcgtttactttgctgacatg
gtgtcgaagagtgcgaactactgccacacgtcccaggctgaccctgttggcctccttctg
ttaggagaggttgcccttggaaacatgcatgaactgaagaaagcctcgcacattacaaag
ttaccaaagggtaaacacagtgtaaaaggtttgggacgaactgctccggacccaacggct
actgtatctctgaatggagtggacgttccgctgggcaaaggggtcaacacaaacattgat
gacacaagtctgctctacaacgagtacattgtgtatgatattgctcaggttaacctgaaa
tacctgctgaaggttcgcttcaactatcaatcctctctctggtga
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integrated database retrieval system
