Pimephales promelas (fathead minnow): 120493992
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Entry
120493992 CDS
T08155
Name
(RefSeq) FERM and PDZ domain-containing protein 1
KO
K23954
FERM and PDZ domain-containing protein 1
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pprm04990
]
120493992
Domain-containing proteins not elsewhere classified [BR:
pprm04990
]
Other domain-containing proteins
FERM domain-containing proteins
120493992
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FERM_M
RA_2
PDZ
PDZ_6
FERM_C_FAK1
FERM_f0
PDZ_2
SNX17-31_F2_FERM
Motif
Other DBs
NCBI-GeneID:
120493992
NCBI-ProteinID:
XP_039548981
LinkDB
All DBs
Position
Unknown
AA seq
1761 aa
AA seq
DB search
MEERDRSRSPSRRTSRVEQVVGRWLRRSRESISRERVLEDGQVADNGSQDQRSCSIRVTV
KIPLDPTLNSHGFTVSTHTPPQVLDVTEGGPADGKLVPGDQLFKINNIAVDDLSTEQAAD
IIRECQNTLILTVLRNTVGPKSSFITPEKRAKLKSNPVKVRFAEEVVVNGHSQGNSLLFL
PNVLKVYLENGQTKAFKFESKTTVKDIVMTLKEKLSITRIEHFSLVLEQQYSISKLYLLH
EEETIQKVAEKKETHDYRCLFRVCFLPRDFKSMLKEDPVAFEYLYLQSVSDVLQERFAVE
MKCNTALRLAALLVQEKLASCGQSLKTPLKAMMKEWGIESFVSHTLLRNMREKDLKKAIS
YHMKKILSQEPKQKVISVNRARLNYLNEMSELKSYGGKAFSATMMLQDRESMVSLLVGAQ
YGVSQVINHKLSIMTTLTEFSSITRVELLPESDRVSLVKIYLQDIKPITLLMESVAAKDL
LCLVAGYCKLFVDPQICVFPWSTYSKCHRISAEEGYVSHCGSDSDDSDTDVDALLTHVAS
TAKSNRSAVKPRDKLPEGTENTQSNNKKDEEVEKERGKAEEVAEEKEQEEDKETIHDNNG
KTVETDDERVGTEKEDKEQEKTPEQPQCVIIVDDPSSEASDSYQTESHFMTSMSSDSIDA
LEEDDLMTYFSTRRPCHLPVKDSYCCEDRYSPALSPQQLHSKDSHSQSDLCSADSHCESD
VDQFFCFAALSNIAECLPSPPAASEEEDCEELGPETEKHEKGSPATCPGTTLPPPGDYVF
TFEQGDTRHYYNICSNVTPDSARSLPQPLSPPGPIEAQPDREGMEVNQTVTVPIFQPPPG
FGDSSSDDEFFDAQERFISPEELSSSAMTKANSAKPSTISLGGIGICVSEQEAEDLEKKQ
KEEGKMITQDEFSNFNKRSKKRRSFMETNYTSLVSFPEQDQLDNSYGNSITSYGSISVNH
DGAGQIECFDGRFSDQGPCPTVSSFTDSEGEPSPLESKPINPSKVNGSGPDNPTDTQVGH
SSKAYQRKQQLIEMEPDSMEFKSVSELMSSVSPTIVPIRSRMDLQDKGSSSNRGRDDEKE
GAVGGLVERLLGGHLFLDISGVKSDSSVLFGERDDHATKQMEDSSQARSVTQKSSSLPRL
GQISPSSLPYFHLPSISYTTSPNINKDDDTVYLESGMGKCLVYPTERTRSHSMSTSFGSG
APHWPSRQLFSQRVVGPESDETDNSCTASIQELSSGVPSYEPAQRFLLTPCSSGILGRLS
ASTLRGKIQSLPLYLSRSQEMLTASSNSSGNVKPVRRLSETQLQRHEVEVAKEVTEDVTL
NVGAPEVTEVKVVTIVSEEVTEVIEEIREVSHISPQACGQHKAKTEPKGFALLAISPLCS
KDDNSLQVSPSSVVVTTQNLNGPWGVVTSGGLQEFGCPPSSTTPENFTSSCGVFTNCQSK
PTIAQPQSLPIPNQNKKQDFSCSSVLAMGCDTVMESAETPLEVCQTVYTNCFSGVLDSAS
FDDELTVYEFSRRTSQGETGDTVLTSVPPSSLSASPASFSPSSPLPSFPHLVLPAPSSTE
LSPLLSPLDAPNCFLTNPYEDIMTSLLTRRYPLPPTGFLSLQRDVDTILSVLAGAIKNQD
RVHEHPRDTCVAHFSENKRRLHAEARGLLAGCQSVVRVGQTPEETLQSLSESFRSLVQLT
IVCLCFSSCQRCRERHAQALTGLENVAKTYQDFARAAELVGSATERKTCHDLSIKLLARQ
CTALTTSVFCLTQLFRTLTAL
NT seq
5286 nt
NT seq
+upstream
nt +downstream
nt
atggaggagcgggaccgcagtcgctcaccatctcgcaggaccagcagagtagaacaggtg
gtgggacgctggcttcgccgctccagagagtccatcagccgtgagcgtgtgttagaagat
gggcaagttgctgacaatggctcccaggatcagaggagctgttcaatcagagtcactgtt
aagatcccacttgaccccacccttaactcccatggcttcactgtctcaacacacactcca
cctcaggtgctggacgtgacagaaggaggccctgctgatggaaagcttgtccctggtgac
caacttttcaaaataaacaatattgctgttgatgatctatctactgagcaagctgctgac
atcatcagagaatgtcagaacaccctaatactgactgtcctgagaaatactgtggggcca
aagtcgtccttcataactccagagaagagagccaagctgaagtcaaaccctgttaaagtg
aggtttgcagaggaggtggtggtcaatggtcactcacagggtaactctctgctgttcctg
cccaatgttctgaaggtctatctggagaatggccaaacgaaggcttttaaattcgaatct
aaaaccactgttaaggacatagtgatgactctgaaggagaaactatcaatcacccggatc
gaacacttctctctggtacttgaacaacaatacagcatcagcaaactatatctactacac
gaggaagaaaccattcaaaaggtggctgaaaagaaggagactcacgactataggtgtctg
tttcgtgtctgttttctaccgagagactttaagagcatgctcaaagaagatcctgtcgcc
tttgagtatctatacttacagagcgtgagtgatgtattgcaggaaaggtttgcagtggag
atgaaatgtaatacagctcttagactggctgctctacttgtacaggaaaagctagcaagc
tgtggacaatctcttaaaacacctctgaaggccatgatgaaggagtggggtattgaaagc
tttgtgtcccacaccttactgcgaaacatgagagagaaggacttgaagaaagccatcagt
taccacatgaaaaagattctatctcaggagccaaagcaaaaggtgatctcagtgaatcgt
gctagactgaactacttgaatgagatgtctgaactcaagtcctatggaggaaaagctttt
agtgcaactatgatgctacaagacagagagtcaatggtgagtttgttggtgggagctcag
tatggggtgagtcaagtgatcaaccataaactgagcatcatgaccacactaactgaattc
agcagcattaccagagtggaattattacccgagtcagacagagttagtctggtcaagatc
tacctgcaggatataaagccaataacattgctgatggagtcagtggcagctaaagattta
ttgtgtctggttgctggatactgcaaactatttgtggacccccagatctgcgtgttcccc
tggtcaacttattcaaagtgccaccgcatatcagcagaggagggttatgtgtcacactgt
ggcagtgactctgacgactcagacacagatgtggatgctctccttactcatgttgctagc
actgctaaaagcaacagatcagcagttaaacctagagataagctaccagaaggaactgaa
aacacacaaagtaacaataaaaaagatgaagaggtggagaaggaacgaggcaaagcagag
gaggtggctgaggagaaagaacaggaagaggataaagaaaccatccatgataataatgga
aagacagtagaaacagatgatgagagagtaggcacagaaaaggaagacaaagagcaagag
aaaacgcctgaacaacctcagtgtgtcatcattgtggatgacccctcatctgaagcatct
gattcataccaaactgaatcacatttcatgaccagcatgtccagtgactcaatagatgcc
ctagaagaggacgacctgatgacctacttctctaccagacgcccatgccatttaccagtg
aaagactcttactgctgtgaagaccgctattcaccagcattgtctccacagcaactgcac
agcaaagattcccattctcaaagtgacctgtgctctgccgattcccattgtgagtctgat
gttgaccaattcttttgctttgctgcactttcaaatattgctgaatgtctacctagtccc
cctgcagccagtgaagaggaggactgtgaggagttggggccagagactgaaaaacatgaa
aaggggtctcctgctacatgtcctggaacaaccctaccccctcctggagactatgtgttc
acctttgaacaaggagatacaagacactactacaacatctgctccaatgtgacccctgac
agtgcccgcagccttccacaacctctttctccaccaggtcctatagaagcgcaaccggat
cgggaaggaatggaagtaaatcagacagtaacagtgccaatttttcaacctccaccaggg
tttggagacagcagttcagatgatgagttctttgacgctcaggaaagattcatatcccct
gaagaactctcctcaagtgcgatgacaaaagcaaattctgctaagccgagcaccattagc
ctgggtgggattggcatctgtgtcagtgaacaagaagcagaggatctagagaagaaacaa
aaggaggaaggaaaaatgattacacaagatgaattttcaaatttcaataaaagatccaaa
aagcgtcgctcatttatggaaacaaattacacatccctggtatcattcccagaacaggat
caattagataacagctatggaaatagcataacaagctatggctctatatcagtcaaccat
gatggtgctggacaaatagaatgttttgatggcagattctcagaccaaggtccatgtcca
acagtctcatcttttaccgattctgaaggagaaccatcaccactggaatcaaaacccatc
aatccatccaaagtcaatggatcaggaccagataatcctactgatacacaagtgggacac
tcaagcaaagcctatcagcggaaacagcaacttatagagatggaaccagattccatggag
ttcaaatcagtctctgagctaatgtcttcagtatcgccaactatagtaccaatacgctcc
cgcatggacctacaggacaaaggtagttccagtaaccgtggcagagatgatgagaaggag
ggtgcagttggaggtcttgttgagagactgcttggaggccacttgttccttgatatatct
ggagtaaagtctgacagcagtgttttatttggtgaaagagatgatcatgcaaccaaacaa
atggaggattcatcccaggccagatcagtgacccaaaagagcagttcactgccaagactt
ggccagatatccccatcaagtttaccctacttccatctcccgagtatatcatacaccaca
agccctaatataaacaaggatgatgatactgtatatctagaatctgggatgggaaaatgc
ttagtataccccacagagaggacaagaagtcacagcatgtctacatcctttggcagtggt
gcaccacattggccatcaagacaattattttcccagcgagtcgtaggaccagaatctgat
gaaactgacaattcttgtactgcttccatccaagaactgtcttctggcgttccctcttat
gaaccagcccagaggttccttcttacgccctgttcatctggcatccttgggcgactttct
gcctcaacattgcggggaaagatccagagccttcctctctacctatcacgttcccaggaa
atgctaactgccagttctaatagcagtggcaacgttaagcctgtgagaagactttcagaa
acacaactacaaagacatgaagttgaggtagcaaaagaagtaactgaggatgtgaccttg
aatgtaggagctcctgaagtaacagaggtaaaagtggttaccatagtatctgaagaagta
actgaagtcattgaggagataagagaggtcagccacattagtcctcaagcatgtgggcag
cataaagccaaaactgaaccaaaaggatttgctctattagccatatcccccttgtgttca
aaggatgacaactctctccaagtcagcccctcatctgtagtggttactacacaaaaccta
aacggaccctggggggtggtaacgtctggtggattacaagaatttggctgccctccctca
agcacaactcccgaaaactttacctctagctgtggggttttcacaaactgccagtccaaa
cctaccattgcccagccacaatccttgcccatccccaatcaaaataagaaacaagacttt
agctgcagctcagtattggctatgggttgtgacactgtaatggagagtgctgagacacct
ttagaggtctgccagacagtatacaccaactgtttcagtggagttcttgacagtgccagc
ttcgatgatgaactcactgtctacgagttttcccgcagaacgagccagggtgaaactggg
gatacagtgctgacatcggtccctccttcctctctctctgcatcccctgcatctttctct
ccatcttctccattgccctcattccctcatctagtactgcctgctccgtcatctacagaa
ctcagtccccttttgtctcccttggatgctccgaactgcttcctaacaaacccctatgaa
gatatcatgacttcactgctgactcgtcggtatcccctaccaccaacaggattcctttct
ttgcaaagggatgtggataccatcttaagtgttcttgctggtgctataaagaatcaagat
agggtccacgagcaccccagggatacctgtgtagctcacttttcagagaacaaaaggcga
ttacatgcagaggctcgggggcttttagctggatgccagagtgtggtcagggttgggcag
acgccagaggaaacacttcaatcattgtctgaaagcttccgctcactagtacagctgaca
attgtatgcttatgtttctctagttgccagcgatgcagggagcgccatgcccaagcactt
acaggactagaaaatgttgcaaaaacttatcaagactttgctcgggcagcagagcttgtg
ggaagtgctaccgaaaggaagacttgtcatgatctgagtattaaacttctggctcgccaa
tgcactgccctgacaacctcagtcttctgcctaacccagctcttccgtaccctcactgcc
ctttga
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integrated database retrieval system
