Pimephales promelas (fathead minnow): 120494073
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Entry
120494073 CDS
T08155
Symbol
chrna6
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-6 isoform X1
KO
K04808
nicotinic acetylcholine receptor alpha-6
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04080
Neuroactive ligand-receptor interaction
pprm04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
120494073 (chrna6)
04082 Neuroactive ligand signaling
120494073 (chrna6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pprm04040
]
120494073 (chrna6)
Ion channels [BR:
pprm04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
120494073 (chrna6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Red1
Motif
Other DBs
NCBI-GeneID:
120494073
NCBI-ProteinID:
XP_039549108
LinkDB
All DBs
Position
Unknown
AA seq
512 aa
AA seq
DB search
MNSAGRVTLFFLLIALITQDCISSKGEDRLFRRLFRRYNQFIRPVENVSDPVTVEFEVSI
SQLVKVDEVNQIMETNLWLRHIWNDYKLKWLPVEFDGIEFIRVPSNKIWRPDIVLYNNAV
GDFLVEDKTKALLKYDGTITWVPPAIFKSSCPMDITYFPFDYQNCSMKFGSWTYDKAKID
LVLIGSKVNLKDFWESGEWEIIDAPGYKHDIKYNCCEEIYPDITYSFYIRRLPLFYTINL
IIPCLLISFLTVLVFYLPSDCGEKVTLCISVLLSLTVFLLVITETIPSTSLVIPLIGEYL
LFTMIFVTLSIVITVFVLNVHYRTPMTHTMPSWVRTVFLRALPRIMLMRRPLDLSESSGK
VGLESGSSSATGAGRGGEGKKRKNSGSQQGAMNSLEFGEGKAALEGKKGGCPCHPMKEAT
EGDCGKVSRQLSPQAINTVVAFSVVSPEIKQAIESVKYIAENMRSRNKAKEVEDDWKYVA
MVIDRIFLWVFVLVCVLGTLGLFLQPLIGFFS
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgaattctgcggggagagtgactttgttttttcttttaattgccctgatcacgcaagat
tgtatatcatctaaaggagaagacaggctgtttcgtcgtttattcaggaggtataatcaa
ttcattcggccagtcgaaaatgtgtctgaccctgtcactgtggagtttgaggtctccatc
tcacagcttgttaaagtggatgaagtcaatcagatcatggaaacaaacctttggctgaga
catatatggaatgactacaagctgaagtggttaccagtagagtttgatggaattgagttc
atcagagttccatcaaataaaatctggaggcctgacattgtactttacaacaatgctgtt
ggggacttcttggtggaagacaaaaccaaagctctgttgaaatatgatggaaccatcacc
tgggtccctcctgcaatcttcaaatcatcctgccctatggacatcacttacttccccttt
gactatcagaactgctcaatgaagtttggttcctggacctatgacaaggcaaagattgac
ttggttctcattggctcaaaggtcaaccttaaagacttttgggagagtggagagtgggag
atcattgatgcacccggttataagcatgacatcaagtacaactgctgtgaagagatctac
ccagacataacatacagtttttacatacgccgactgcccctcttctacactattaacctt
atcatcccctgcctcctcatctcatttctgacagtactcgtcttctaccttccatcagac
tgtggcgagaaagtgacattgtgcatctctgtactcctctctctcactgtgttccttctt
gtcataacagaaaccatcccctccacctcacttgtgatccccctgataggcgagtatctt
ctcttcaccatgattttcgtcaccctctctattgtcatcaccgtctttgtattgaatgtg
cactatcgcacccccatgacccatactatgcctagctgggtacgtactgtcttcctccga
gctttaccccgcatcatgcttatgcgccggcctctcgatctatcagagtcctctggaaaa
gtaggactagaaagcgggagctcttctgcgactggagcgggacgaggtggagagggaaag
aagaggaaaaatagtggatcccaacagggagcgatgaactctttggaatttggagaaggg
aaagcagcattagaaggaaagaaagggggatgcccttgtcacccaatgaaagaggcaacc
gagggtgattgtgggaaagtgagtcgtcagttgagtccacaggctattaacacagttgtg
gctttctctgtggtgtcaccagaaatcaaacaggctattgagagtgtgaagtacattgct
gagaacatgaggagtcgcaacaaagccaaagaggtggaggatgattggaagtatgttgcc
atggtgattgaccgcatcttcctttgggtctttgtgctggtgtgtgtgctgggaactctg
gggcttttcctacaacctctaattggcttcttctcgtaa
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