Pimephales promelas (fathead minnow): 120494103
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Entry
120494103 CDS
T08155
Symbol
chrnb5a
Name
(RefSeq) neuronal acetylcholine receptor subunit beta-2
KO
K04813
nicotinic acetylcholine receptor beta-2
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04080
Neuroactive ligand-receptor interaction
pprm04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
120494103 (chrnb5a)
04082 Neuroactive ligand signaling
120494103 (chrnb5a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pprm04040
]
120494103 (chrnb5a)
Ion channels [BR:
pprm04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
120494103 (chrnb5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
DUF2417
DUF2754
Motif
Other DBs
NCBI-GeneID:
120494103
NCBI-ProteinID:
XP_039549158
LinkDB
All DBs
Position
Unknown
AA seq
490 aa
AA seq
DB search
MASTWFLCLCLFWLCVTMSLAADAEERLVDFLLGPERYNKLIRPAVNKSQQVTIGIKVSL
AQLISVNEREQIMTTNVWLTQEWNDYRLVWDPNEYDGIKKLRIPSQHIWLPDIVLYNNAD
GVYEVSFYCNAVVSNTGDIFWLPPAIYKSACAIEVRNFPFDQQNCTLKFRSWTYDRTELD
LVLTSDFASRDDYTPSGEWDIVSLPGRKNEDPTDLTYLDVTYDFVIRRKPLFYTINLIIP
CILITSLAILVFYLPSDCGEKMTLCISVLLALTVFLLLISKIVPPTSLAVPLIGKYLMFT
MVLVTFSIVTSVCVLNVHHRSPSTHHMPEWVKRVFLHKLPAFLLMRRPGRSNVRERFRRK
HKQKSFSTDAKSIRLDGDSLFLSDDPGRVCGAWRVGDLPEGSGFRQRVKVRHDPDVDEAI
EGVRFIAEHMKIEDDDEGIIEDWKYVAMVIDRLFLWIFILVCVVGTLGLFVQPLFQSYNT
PVAEEVYGDF
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaacgtggtttttatgtctctgtctattttggctgtgcgtgacaatgtctctt
gctgctgatgcagaggaaaggctggtagattttctgcttggtcctgagcgctacaataaa
cttatccggcctgcggttaataagagtcagcaggttactattggcatcaaagtctctctt
gcacagctcattagtgtgaatgagagggaacaaatcatgacaacgaatgtgtggctgacg
caggagtggaatgactacagactggtgtgggatccaaatgagtacgatggcatcaaaaaa
ctacgaattccatcgcagcacatctggctccctgatatagtactctataacaatgcagat
ggcgtgtatgaagtatcattttactgcaatgcagttgtctccaacaccggtgacattttc
tggctccctcctgccatctacaagagcgcctgtgcgattgaagtccgtaacttccccttt
gatcaacagaactgcacccttaaatttcgttcctggacctacgaccgcacagaactcgat
cttgtcttgacatctgattttgccagtcgtgatgactacacacccagcggcgaatgggat
attgtgtctctccctggcagaaaaaacgaagaccccactgacctcacatacctggatgtc
acatatgactttgtgatcaggcgcaagcctcttttctacacgattaacctcatcattcca
tgcatcctcatcacttctcttgcgattctggttttctaccttccttcagactgtggggag
aagatgacgctttgtatttcagttcttctggctcttactgtgtttctgctcctgatttcg
aagattgttccgccaacatcactggctgttccattaatagggaagtatctgatgtttact
atggtgctggtcacattctctatcgtgacgagtgtgtgtgtgctcaacgtgcaccaccgt
tctccatcaacccaccatatgcccgagtgggtcaagcgtgtgttcctgcataagcttcct
gctttccttctaatgcgacgaccgggaagatctaatgtacgcgagaggtttagaaggaaa
cacaagcagaaatcgttttccactgatgcaaagagcataaggttggatggagactcactc
ttcttaagcgatgaccctggacgtgtatgtggggcatggagggtcggcgatcttcctgag
gggtcgggcttcaggcagagagttaaagtcagacacgacccagatgtggatgaggccatt
gaaggtgtgaggttcattgctgaacatatgaagattgaggatgatgatgaagggattatt
gaggactggaagtatgtggccatggtgattgaccggctcttcctctggatttttatcctg
gtgtgtgtcgtcggcacactcggactctttgttcagcctctctttcagagctataacacc
cccgtggcagaggaagtatatggggatttctaa
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