Pimephales promelas (fathead minnow): 120494171
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Entry
120494171 CDS
T08155
Symbol
psmc1b
Name
(RefSeq) proteasome 26S subunit, ATPase 1b isoform X1
KO
K03062
26S proteasome regulatory subunit T2
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
120494171 (psmc1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
pprm03051
]
120494171 (psmc1b)
Proteasome [BR:
pprm03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
120494171 (psmc1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Prot_ATP_ID_OB_C
AAA_22
AAA_2
DUF815
nSTAND3
AAA_16
AAA_5
RuvB_N
AAA_28
AAA_3
AAA_25
AAA_14
ATPase
RNA_helicase
NPHP3_N
TIP49
NB-ARC
AAA_33
Prot_ATP_ID_OB_N
IstB_IS21
NACHT
Mg_chelatase
AAA_7
ABC_tran
AAA_24
Parvo_NS1
SLFN-g3_helicase
Zeta_toxin
TsaE
Motif
Other DBs
NCBI-GeneID:
120494171
NCBI-ProteinID:
XP_039549290
LinkDB
All DBs
Position
Unknown
AA seq
440 aa
AA seq
DB search
MGQSQSGGHGPGGGKKDDKDKKKKYEPPIPSRVGKRKRKSKGPDAASKLPLVTPHTQCRL
KLLKQERIKDYLLMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNH
AIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAP
QETYADIGGLDAQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLLAKAVA
NQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSG
GEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT
KRRIFQIHTSRMTVATDVNLDDLILAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFK
KSKENVLYKKQEGTPEGLYL
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgggccagagtcaaagcggaggacacggaccaggaggtggaaagaaagatgataaggac
aagaagaagaaatatgagccgcccattccatctagagtgggcaagaggaagaggaagtcc
aagggccctgatgctgccagcaaactgcctttagtcaccccacacacacagtgcagactg
aagctcctgaagcaggagagaattaaagattacctgctgatggaagaggagttcatcaga
aaccaggagcagatgaaacctctagaggagaaacaggaggaggagaggtcaaaggtcgat
gacctcagggggacccctatgtctgtggggaccctggaggagatcatcgatgacaatcat
gccattgtctccacgtctgtgggctcggagcattatgtcagcatcctctcgtttgtggac
aaagatctgctggagcccggctgttccgtcttactcaaccacaaggtccatgctgtcatc
ggggtgctaatggacgacactgaccctcttgtgacagtcatgaaggtggagaaggctccg
caagagacatacgccgatatcggtggactggacgcccagatacaagaaattaaggagtcc
gtggagctgccgctgacccatccagagtattatgaggaaatggggataaagcctcccaaa
ggggtcattctctacggcgcccctggaactggtaaaaccctccttgccaaagcggtggcc
aatcagacgtctgcaacgtttctgcgtgttgttggttcagagctgattcaaaagtacctc
ggcgacggccctaaattagtgcgcgagctcttcagggtggccgaggaacacgcaccctcc
attgtcttcatcgatgagattgacgccattggaactaagagatacgactcaaactcagga
ggtgaacgtgaaattcagagaaccatgttggaactgctcaaccagctggatggctttgat
tcgcgtggagatgtgaaggtcattatggctaccaacagaatagaaacccttgaccctgct
cttatcagaccgggtcgtatcgaccgtaagatcgagttcccgttaccagatgagaaaacc
aaaagaaggattttccagattcacaccagcagaatgactgtggccaccgatgtgaatctg
gacgacctcatcctggccaaagacgacctttcaggagccgatattaaagccatctgtaca
gaagcagggctcatggccctcagagagcgcaggatgaaggtcaccaacgaggacttcaag
aagtcgaaagaaaacgtgttgtataagaagcaggagggcacccccgaaggcctctatctg
taa
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