KEGG   Pimephales promelas (fathead minnow): 120494242
Entry
120494242         CDS       T08155                                 
Symbol
gtf3c2
Name
(RefSeq) general transcription factor 3C polypeptide 2 isoform X1
  KO
K15200  general transcription factor 3C polypeptide 2
Organism
pprm  Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:pprm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pprm03021]
    120494242 (gtf3c2)
Transcription machinery [BR:pprm03021]
 Eukaryotic type
  RNA polymerase III system
   Basal transcription factors
    TFIIIC
     120494242 (gtf3c2)
SSDB
Motif
Pfam: WD40_CDC20-Fz Beta-prop_THOC3 Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st WDR55 Beta-prop_WDR36-Utp21_1st Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_TEP1_2nd Beta-prop_NOL10_N WD40_Prp19 Beta-prop_VPS8 Beta-prop_CAF1B_HIR1 PEP5_VPS11_N WD40_RFWD3
Other DBs
NCBI-GeneID: 120494242
NCBI-ProteinID: XP_039549398
LinkDB
Position
Unknown
AA seq 852 aa
MAAAALKLGEQKGEKMGLPCEKDTDNQPGQINQESKGATQDSEPQNMKSEMQMSGLTSQV
PPDVDQESPVNTEGTQKNQGSKAKTPVKRRRKEIIQQTPPQHDNSAISDTSELTASGRPK
RRAAKVALDYLHKLAKDLGTQSTKDRPESGEANSTSRKTNAAKRRGTKRKTPESDSDLDD
DEDFSPGKDEAAESEEEEDSEPDFSLNVEKARPPRGSAKSRPPRGNYQCLLSNGLANNVM
EPVWNCFSRTKSFRDEYFSPWVFPEWIPSAKDWHFLSNSEAEKYLPQEKESASFTFTREK
IKGRIKLQTVKRFESLPHHSERWDTLFFVGGPVRSMEWCPCPDGAAKRQYAAIYCHKGMD
DKHKINNLYSGPALLQLWDIGDLQCKRRPSTAPHLAYALAIDDGCIWNIKWCPAGVWELP
STNRKAPQMPRLGLLAAAFSNGTIGVYSLPHPEALAAHHQSKGETSQAPLICRVKKTLCV
KMGSNQADHKGQSGLCFAMDWLHVKPHNLLAAGFYDGLVGLWDLASKSTLLRVKAPDGVV
SLFPYHCFHAHDENIRTLSWCKASSNLLVTVGDDRMAKMWDVRKACVPLMAVKRCLSPEV
YWPLFWSGFLLAQECCFATFGQHGIHYFDSGYLGIKPYFVCPRKATIWSLSMSDWINTFA
VADNGGDCLFSLLPEMDMDPNNIRRRRYSVYRTDMVQFEPGEGPGDEEQEEDMENAPNNP
GKEPLTYKGAVRKYYLHFHDLDLGNFAKCENRPMMKHLHQNEVKGVAKVDQMPLSALYKV
RFNPNMDSYNWVLSGGQSGLVRVNCARGLSCSVMLKQLHEAQAQFSAMFQSQEPNDSVTA
VRHSTADTVQVR
NT seq 2559 nt   +upstreamnt  +downstreamnt
atggcagcagctgccctgaagttgggcgagcagaaaggtgaaaaaatgggtttgccgtgt
gaaaaggacacagataaccaaccaggacagattaaccaggagagtaaaggagctactcag
gactcagagccgcaaaacatgaagtcggagatgcaaatgtctggtctgacctcccaggtt
cccccagatgtggaccaggaaagcccagttaatacagaaggaacccagaagaatcaaggt
tctaaggcaaagactcctgtcaaaaggaggagaaaggagattattcaacagacaccacca
caacatgacaattcagcaatctctgacacttctgaactcactgctagtggtcggcccaag
aggagagctgctaaagttgctttagattatcttcacaagctggccaaggatctcgggact
caatcaacaaaagataggcccgaatctggtgaagcgaacagcacctcccggaaaacgaat
gcagcaaagagaagggggacgaaaaggaaaactccagagtctgacagcgacttagatgat
gatgaggatttttccccaggaaaggatgaagcggcagagagtgaagaggaagaagattca
gagccagacttcagcttgaacgtggaaaaagcaagaccacccagaggcagtgctaaaagc
agaccacccagaggaaactatcagtgtctgctttcaaatggcttggctaacaatgtgatg
gagcctgtctggaactgttttagtaggaccaaatcattccgggatgaatacttttccccc
tgggtgtttcctgaatggattccttctgccaaagattggcatttcctgtccaacagtgag
gctgaaaaatatttaccgcaagagaaagaatctgcctcttttacctttactcgggaaaaa
atcaagggacggatcaaactgcaaacggtgaaaaggtttgaatcattgccacatcattct
gagcgctgggacactctgttctttgtggggggtcctgtgcggtccatggagtggtgccca
tgtcctgacggggcagcaaaaagacagtatgccgccatctactgccacaaaggcatggac
gacaaacacaaaatcaacaacctgtactcaggtcctgccttactgcagctgtgggacatc
ggagaccttcagtgtaaaagaaggccctcaactgctcctcatctagcatatgctctagcg
atcgatgacggatgcatctggaatataaagtggtgtcctgcaggagtgtgggagctgccc
tccaccaacagaaaggcaccacaaatgcctagattaggtcttctagcagcagctttctct
aatggaaccatcggtgtctacagtcttccacacccagaagcccttgcagcacaccatcaa
agtaaaggagaaaccagccaagcaccgctgatatgccgggtgaagaagacgctttgtgtg
aaaatgggctccaaccaggcagatcataaaggtcaaagtggcctgtgctttgctatggat
tggctccatgtcaagccacataaccttttggcagctggcttctatgatggtctggttggt
ttgtgggatcttgctagcaagtctacactactgagagtcaaggctcccgatggagttgtg
tccctcttcccttaccactgttttcatgcccacgacgagaacatccgaactctgagctgg
tgcaaagcctcgagtaacttgttggtgacagtcggagatgatcgcatggctaaaatgtgg
gatgtgaggaaagcctgcgtgcctcttatggcagtgaagcgctgcctgtcccctgaagtg
tactggcccctcttttggagcggcttcctgttggctcaagagtgttgctttgccactttt
gggcaacatggaatccattattttgattcaggttaccttggaattaagccttactttgtg
tgtcctagaaaagccactatttggagcctgtctatgtctgattggataaacacttttgct
gttgcggacaatggaggagattgtttatttagtttgcttcctgaaatggatatggacccc
aacaatatcagacgacggagatattcagtgtacaggactgacatggtccagtttgaaccc
ggtgaggggcctggagacgaggaacaggaggaggacatggaaaacgctccaaataacccg
gggaaggagccattgacttacaaaggagcagtcagaaagtactatctccactttcatgac
ttggacctggggaactttgctaagtgtgaaaatcggcccatgatgaagcacctgcatcaa
aacgaggtcaaaggtgtcgctaaagtggaccagatgccactgagcgcactctacaaggtc
cgttttaacccaaacatggattcgtacaactgggtgttgtcgggcggtcagtcgggtttg
gtgcgtgtgaactgcgctcgtggactgagctgctccgtcatgctcaagcagttacatgag
gctcaggcccagttcagcgccatgttccagtctcaggagcccaatgactctgtgacagcc
gttcgtcacagcacagcggatacagtacaagtgcgctag

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