KEGG   Pimephales promelas (fathead minnow): 120494273
Entry
120494273         CDS       T08155                                 
Symbol
tubb1
Name
(RefSeq) tubulin beta-1 chain
  KO
K07375  tubulin beta
Organism
pprm  Pimephales promelas (fathead minnow)
Pathway
pprm04145  Phagosome
pprm04540  Gap junction
pprm04814  Motor proteins
pprm05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:pprm00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    120494273 (tubb1)
  09144 Cellular community - eukaryotes
   04540 Gap junction
    120494273 (tubb1)
  09142 Cell motility
   04814 Motor proteins
    120494273 (tubb1)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    120494273 (tubb1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pprm03036]
    120494273 (tubb1)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:pprm04812]
    120494273 (tubb1)
   04147 Exosome [BR:pprm04147]
    120494273 (tubb1)
Chromosome and associated proteins [BR:pprm03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     120494273 (tubb1)
Cytoskeleton proteins [BR:pprm04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    120494273 (tubb1)
Exosome [BR:pprm04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   120494273 (tubb1)
  Exosomal proteins of colorectal cancer cells
   120494273 (tubb1)
  Exosomal proteins of bladder cancer cells
   120494273 (tubb1)
SSDB
Motif
Pfam: Tubulin Tubulin_C Misat_Tub_SegII Tubulin_2 Tubulin_3
Other DBs
NCBI-GeneID: 120494273
NCBI-ProteinID: XP_039549439
LinkDB
Position
Unknown
AA seq 469 aa
MREIVHLQIGQCGNQIGSKFWEVISEEHGINRAGTYEGDMDLQLQRVNVYFNEAHGGKYV
PRALLVDLEPGTMDSVRSSHIGQLFRPDNFIHGNSGAGNNWAKGHYTEGAELVEQVVERV
RNEAESCDCLQGFQFVHSLGGGTGSGMGTLIINKIREEYPDRIMNSFSVMPSPKVSDTVV
EPYNATLSVHQLIENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSLTMSGVTTSL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYSALTVPELTQQMFDARNMM
TACDPRRGRYLTVAGIFRGHMSTKEVDEQMLAIQQKNSNYFVDWIPHNVKVVVCDIPPRG
LKMASTFIGNNTAIQEIFKRIGEQFSVMFRRKAFLHWYTGEGMDELEFTEAESNMNDLVS
EYQQYQDATADIDYDAEDEEAEEEGLPSIVQSTRVEVKTESVAETSDSE
NT seq 1410 nt   +upstreamnt  +downstreamnt
atgcgtgagattgttcatctacagatcggacagtgtgggaatcagatcggctctaagttc
tgggaggtgatcagtgaagaacatggtattaacagagcaggaacatatgagggcgacatg
gaccttcagcttcagagggtcaatgtgtacttcaatgaagcacatggtggcaaatatgtt
ccaagagcattgttagtggacctggagcctggcactatggacagcgtgaggagcagccac
ataggacagctcttcagaccggataattttatacacggcaattctggagccggcaataac
tgggccaaaggtcactataccgagggcgcagaacttgtggagcaggttgtggaacgtgtc
cgtaatgaagcggagagctgcgactgcttgcaggggttccagttcgtccactctctaggt
ggtggcactggttcgggaatgggtaccttgattatcaataagatccgagaggagtaccct
gaccgcatcatgaatagtttcagcgtaatgccctcgccgaaggtctccgatactgtggtg
gagccgtataacgcgaccctatcagttcaccagctgattgagaatacagatgagacgttt
tgtattgacaacgaagcgttgtatgatatctgcttccgcactctcaagctcacaacgcca
acttatggagatctcaaccacctcgtatccctcaccatgagtggggtcacaacctccctc
cgcttcccaggtcaactgaacgctgaccttcggaagctggccgtcaatatggtgcccttc
ccgcgtctccatttcttcatgcctggtttcgctcctcttacagcacgtggtagccaacaa
tacagtgccctgacggtgcccgagctcacccagcagatgttcgacgcccgtaacatgatg
accgcgtgcgacccgcgtcgaggacgctatctgacagtggcgggcattttccgtggtcac
atgtccactaaggaggtcgatgagcagatgctcgccattcagcagaagaacagcaattac
tttgtggattggatccctcacaacgtcaaagtcgttgtttgtgatatcccgccacgaggc
ctcaaaatggcctccacgttcatcggaaacaacaccgccatccaggagatattcaagcgc
ataggggagcagttttcggtcatgttccgacgcaaggccttcctgcattggtacacgggg
gagggcatggatgagctggagttcaccgaggcggagagcaacatgaatgatctggtttca
gaataccagcaatatcaggatgccacagccgatattgattacgacgcagaagatgaagag
gcagaagaggagggtctgccatcaatagtacagagcactcgagtagaggttaagactgag
tcggtcgctgaaacatctgatagcgaatga

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