Pimephales promelas (fathead minnow): 120494273
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Entry
120494273 CDS
T08155
Symbol
tubb1
Name
(RefSeq) tubulin beta-1 chain
KO
K07375
tubulin beta
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04145
Phagosome
pprm04540
Gap junction
pprm04814
Motor proteins
pprm05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
120494273 (tubb1)
09144 Cellular community - eukaryotes
04540 Gap junction
120494273 (tubb1)
09142 Cell motility
04814 Motor proteins
120494273 (tubb1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
120494273 (tubb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pprm03036
]
120494273 (tubb1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pprm04812
]
120494273 (tubb1)
04147 Exosome [BR:
pprm04147
]
120494273 (tubb1)
Chromosome and associated proteins [BR:
pprm03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
120494273 (tubb1)
Cytoskeleton proteins [BR:
pprm04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
120494273 (tubb1)
Exosome [BR:
pprm04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
120494273 (tubb1)
Exosomal proteins of colorectal cancer cells
120494273 (tubb1)
Exosomal proteins of bladder cancer cells
120494273 (tubb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Misat_Tub_SegII
Tubulin_2
Tubulin_3
Motif
Other DBs
NCBI-GeneID:
120494273
NCBI-ProteinID:
XP_039549439
LinkDB
All DBs
Position
Unknown
AA seq
469 aa
AA seq
DB search
MREIVHLQIGQCGNQIGSKFWEVISEEHGINRAGTYEGDMDLQLQRVNVYFNEAHGGKYV
PRALLVDLEPGTMDSVRSSHIGQLFRPDNFIHGNSGAGNNWAKGHYTEGAELVEQVVERV
RNEAESCDCLQGFQFVHSLGGGTGSGMGTLIINKIREEYPDRIMNSFSVMPSPKVSDTVV
EPYNATLSVHQLIENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSLTMSGVTTSL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYSALTVPELTQQMFDARNMM
TACDPRRGRYLTVAGIFRGHMSTKEVDEQMLAIQQKNSNYFVDWIPHNVKVVVCDIPPRG
LKMASTFIGNNTAIQEIFKRIGEQFSVMFRRKAFLHWYTGEGMDELEFTEAESNMNDLVS
EYQQYQDATADIDYDAEDEEAEEEGLPSIVQSTRVEVKTESVAETSDSE
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagattgttcatctacagatcggacagtgtgggaatcagatcggctctaagttc
tgggaggtgatcagtgaagaacatggtattaacagagcaggaacatatgagggcgacatg
gaccttcagcttcagagggtcaatgtgtacttcaatgaagcacatggtggcaaatatgtt
ccaagagcattgttagtggacctggagcctggcactatggacagcgtgaggagcagccac
ataggacagctcttcagaccggataattttatacacggcaattctggagccggcaataac
tgggccaaaggtcactataccgagggcgcagaacttgtggagcaggttgtggaacgtgtc
cgtaatgaagcggagagctgcgactgcttgcaggggttccagttcgtccactctctaggt
ggtggcactggttcgggaatgggtaccttgattatcaataagatccgagaggagtaccct
gaccgcatcatgaatagtttcagcgtaatgccctcgccgaaggtctccgatactgtggtg
gagccgtataacgcgaccctatcagttcaccagctgattgagaatacagatgagacgttt
tgtattgacaacgaagcgttgtatgatatctgcttccgcactctcaagctcacaacgcca
acttatggagatctcaaccacctcgtatccctcaccatgagtggggtcacaacctccctc
cgcttcccaggtcaactgaacgctgaccttcggaagctggccgtcaatatggtgcccttc
ccgcgtctccatttcttcatgcctggtttcgctcctcttacagcacgtggtagccaacaa
tacagtgccctgacggtgcccgagctcacccagcagatgttcgacgcccgtaacatgatg
accgcgtgcgacccgcgtcgaggacgctatctgacagtggcgggcattttccgtggtcac
atgtccactaaggaggtcgatgagcagatgctcgccattcagcagaagaacagcaattac
tttgtggattggatccctcacaacgtcaaagtcgttgtttgtgatatcccgccacgaggc
ctcaaaatggcctccacgttcatcggaaacaacaccgccatccaggagatattcaagcgc
ataggggagcagttttcggtcatgttccgacgcaaggccttcctgcattggtacacgggg
gagggcatggatgagctggagttcaccgaggcggagagcaacatgaatgatctggtttca
gaataccagcaatatcaggatgccacagccgatattgattacgacgcagaagatgaagag
gcagaagaggagggtctgccatcaatagtacagagcactcgagtagaggttaagactgag
tcggtcgctgaaacatctgatagcgaatga
DBGET
integrated database retrieval system